FFCP PHASE1:Hg19::chr5:176730629..176730638,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:176730629..176730638,-
|short_description=p5@RAB24
|description=CAGE_peak_5_at_RAB24_5end
|association_with_transcript=4bp_to_ENST00000393610_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53917 | |EntrezGene=53917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9765 | |HGNC=9765 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000393610_5end | |||
|cluster_id=chr5:176730629..176730638,- | |||
|coexpression_cluster_id=C1588 | |||
|description=CAGE_peak_5_at_RAB24_5end | |||
|id=chr5:176730629..176730638,- | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-38!42;CL:0000860!2.14e-36!45;CL:0000766!3.24e-33!76;CL:0000557!5.35e-29!71;CL:0000738!8.49e-29!140;CL:0000763!3.54e-26!112;CL:0000049!3.54e-26!112;CL:0002009!5.08e-26!65;CL:0000037!3.80e-25!172;CL:0000566!3.80e-25!172;CL:0000839!7.72e-25!70;CL:0002032!1.10e-24!165;CL:0000837!1.10e-24!165;CL:0002194!4.61e-24!63;CL:0000576!4.61e-24!63;CL:0000040!4.61e-24!63;CL:0000559!4.61e-24!63;CL:0000988!1.50e-23!182;CL:0002031!3.95e-22!124;CL:0002087!9.71e-20!119;CL:0002393!6.26e-11!9;CL:0002397!6.26e-11!9;CL:0000094!2.67e-09!8;CL:0000134!2.71e-07!358;CL:0002320!5.57e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.03e-34;33!CL:0002057;5.03e-34;33!CL:0000576;4.91e-32;48!CL:0000766;4.79e-27;69!CL:0000473;1.61e-23;39!CL:0000234;1.61e-23;39!CL:0000094;1.61e-23;8!CL:0002393;9.19e-22;6!CL:0002397;9.19e-22;6!CL:0000081;5.80e-17;11!CL:0000875;1.74e-16;3!CL:0002396;1.74e-16;3!CL:0000775;2.46e-16;3!CL:0000763;5.56e-15;100!CL:0001014;2.41e-12;2!CL:0001016;2.41e-12;2!CL:0000771;3.18e-12;2!CL:0002087;1.85e-10;104!CL:0000738;4.42e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.02e-67,42;CL:0002057,2.02e-67,42;CL:0000766,1.74e-59,72;CL:0000473,2.41e-58,48;CL:0000234,2.41e-58,48;CL:0002009,1.58e-52,61;CL:0000557,2.61e-51,67;CL:0000763,6.13e-47,108;CL:0000049,6.13e-47,108;CL:0002194,1.24e-45,59;CL:0000576,1.24e-45,59;CL:0000040,1.24e-45,59;CL:0000559,1.24e-45,59;CL:0000839,2.56e-40,66;CL:0002393,4.53e-36,9;CL:0002397,4.53e-36,9;CL:0000738,5.39e-36,136;CL:0002032,1.55e-31,161;CL:0000837,1.55e-31,161;CL:0000037,5.87e-30,168;CL:0000988,4.12e-28,177;CL:0002031,2.77e-26,120;CL:0000094,7.75e-24,8;CL:0002087,4.66e-23,115;CL:0000081,3.44e-17,11;CL:0000875,1.23e-16,3;CL:0002396,1.23e-16,3;CL:0000775,1.30e-16,3;CL:0001014,2.04e-12,2;CL:0001016,2.04e-12,2;CL:0000771,2.85e-12,2;CL:0000134,9.91e-12,354;CL:0002320,2.27e-11,361;CL:0000219,4.22e-10,386;CL:0000034,7.63e-09,441;CL:0000048,1.51e-08,427;CL:0000723,2.48e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.41e-45;42!CL:0000049;5.82e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.56e-24!86;UBERON:0002371!1.44e-23!80;UBERON:0002390!2.05e-22!102;UBERON:0003061!2.05e-22!102;UBERON:0002193!4.96e-22!112;UBERON:0002405!7.69e-20!115;UBERON:0004765!1.87e-17!101;UBERON:0001434!1.87e-17!101;UBERON:0002204!1.03e-07!167;UBERON:0002384!4.31e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.21e-44,76;UBERON:0001474,5.28e-41,82;UBERON:0004765,6.80e-37,90;UBERON:0002390,2.71e-36,98;UBERON:0003061,2.71e-36,98;UBERON:0002405,1.56e-35,93;UBERON:0001434,1.13e-32,100;UBERON:0002193,2.01e-32,108;UBERON:0002204,2.43e-17,167;UBERON:0003081,1.46e-14,203;UBERON:0002384,7.03e-11,371;UBERON:0000926,2.56e-07,315;UBERON:0004120,2.56e-07,315;UBERON:0006603,2.56e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0.0787107813136792,1.57345710739562,0.383829398097213,0.154816123316076,0,0,0,0,0.284338464974843,0,1.10799081706375,1.20326668482085,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.485168122375632,1.16214518452842,0,2.47765096716083,0.863077176966451,0.768482119587302,0.236482229888585,1.37898272294647,0.645484683583826,5.41705946377367,0.752969358170419,0.545812300115692,1.57306439111559,1.83650335422542,1.92557416245656,2.55734850319616,0.659702600373432,0.797854630486527,0.852449501065388,3.77272010217159,1.13477044938228,3.73693349397345,0.251248665256743,1.0429658368404,1.08594422352558,6.05399502633369,4.05105399586321,3.79754864929061,2.32380814943136,2.12604299965044,1.46761051855863,0.44931452458598,0.750884464207532,0,1.42506371870624,3.58050018958362,1.82664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,2.63560834872127,11.6334079244498,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0.6312121671319,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.394061520403854,1.07813787429759,0.128343036279748,0,0,0,0.335032530668698,0,1.49801404789436,2.99161459204025,1.65766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,0,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0,0,0,0,0,0,0.50787533340481,0.321176150207399,0.403599414382095,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,1.5950057986596,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,3.00646838828985,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.0674035438541849,0,0,0,0,0.321506296930038,0.137539436597234,0,6.52424285499351,3.86900977278975,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.397832444232549,0,0,0,0,0,0.147856086217045,0,0.781078098613847,0,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0.115233987555779,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0.422655727583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| ||
|short_description=p5@RAB24 | |||
}} | }} |
Latest revision as of 05:50, 17 September 2015
Short description: | p5@RAB24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAB24_5end |
Coexpression cluster: | C1588_Eosinophils_CD14CD16_CD14_Neutrophils_Basophils_Whole_embryonic |
Association with transcript: | 4bp_to_ENST00000393610_5end |
EntrezGene: | RAB24 |
HGNC: | 9765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.21e-44 | 76 |
bone element | 5.28e-41 | 82 |
skeletal element | 6.80e-37 | 90 |
hematopoietic system | 2.71e-36 | 98 |
blood island | 2.71e-36 | 98 |
immune system | 1.56e-35 | 93 |
skeletal system | 1.13e-32 | 100 |
hemolymphoid system | 2.01e-32 | 108 |
musculoskeletal system | 2.43e-17 | 167 |
lateral plate mesoderm | 1.46e-14 | 203 |
connective tissue | 7.03e-11 | 371 |
mesoderm | 2.56e-07 | 315 |
mesoderm-derived structure | 2.56e-07 | 315 |
presumptive mesoderm | 2.56e-07 | 315 |