FFCP PHASE1:Hg19::chr5:176830734..176830752,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3530 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000504406_5end | |||
|cluster_id=chr5:176830734..176830752,- | |||
|description=CAGE_peak_5_at_F12_5end | |||
|id=chr5:176830734..176830752,- | |||
|ontology_enrichment_celltype=CL:0002076!8.02e-24!43;CL:0000066!2.03e-21!254;CL:0000223!5.23e-15!59;CL:0002368!8.03e-13!13;CL:0002251!2.58e-12!21;CL:0000082!2.80e-10!19;CL:0002202!8.50e-09!9;CL:0002632!8.50e-09!9;CL:0002159!3.05e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.23e-28;13!CL:0002202;3.79e-24;9!CL:0002632;3.79e-24;9!CL:0002328;2.54e-19;3!CL:0000307;6.13e-19;3!CL:0000575;7.11e-13;2!CL:0002076;2.66e-12;42!CL:0000082;6.10e-11;19!CL:0002553;4.20e-07;1!CL:0002159;5.30e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.40e-28,13;CL:0002202,3.18e-24,9;CL:0002632,3.18e-24,9;CL:0002328,2.40e-19,3;CL:0000068,4.98e-19,3;CL:0000069,4.98e-19,3;CL:0000307,4.98e-19,3;CL:0000377,4.98e-19,3;CL:0002076,3.08e-18,42;CL:0000066,3.14e-14,253;CL:0000575,9.05e-13,2;CL:0000223,1.47e-12,58;CL:0000082,5.85e-11,19;CL:0002553,3.02e-07,1;CL:0002159,5.57e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000377;6.13e-19;3!UBERON:0008814;7.11e-13;2!UBERON:0010056;7.11e-13;2!CL:0000223;1.42e-07;58!UBERON:0009143;4.20e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.74e-16!106;DOID:0050687!2.01e-16!143;DOID:1749!2.87e-09!14;DOID:162!4.17e-09!235;DOID:14566!8.07e-09!239;DOID:0050615!1.58e-08!16;DOID:1324!4.42e-08!15;DOID:299!3.15e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.78e-08;25!DOID:3151;9.89e-08;1!DOID:3149;9.89e-08;1!DOID:3111;4.20e-07;1!DOID:3603;4.20e-07;1!DOID:1749;5.56e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.19e-08,106;DOID:299,4.42e-08,25;DOID:3151,9.91e-08,1;DOID:3149,9.91e-08,1;DOID:3111,3.21e-07,1;DOID:3603,3.21e-07,1;DOID:1749,5.94e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.08e-13!169;UBERON:0000925!1.08e-13!169;UBERON:0006595!1.08e-13!169;UBERON:0005153!2.49e-12!37;UBERON:0001004!4.85e-12!72;UBERON:0001007!5.39e-11!155;UBERON:0001555!5.39e-11!155;UBERON:0007026!5.39e-11!155;UBERON:0005157!2.44e-10!51;UBERON:0004802!2.80e-10!19;UBERON:0000115!2.80e-10!19;UBERON:0005178!1.03e-09!34;UBERON:0002224!1.03e-09!34;UBERON:0004807!1.97e-09!28;UBERON:0005181!3.07e-09!35;UBERON:0000065!5.62e-09!53;UBERON:0000064!6.65e-09!219;UBERON:0004921!1.27e-08!129;UBERON:0004185!1.27e-08!129;UBERON:0000344!1.75e-08!12;UBERON:0002048!3.21e-08!22;UBERON:0000117!3.21e-08!22;UBERON:0000171!3.21e-08!22;UBERON:0000170!3.21e-08!22;UBERON:0005597!3.21e-08!22;UBERON:0000118!3.21e-08!22;UBERON:0000077!6.18e-08!130;UBERON:0000161!7.82e-08!35;UBERON:0005911!1.25e-07!82;UBERON:0000072!1.87e-07!46;UBERON:0000481!5.68e-07!347;UBERON:0000475!8.88e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.54e-19;3!UBERON:0002031;2.54e-19;3!UBERON:0005178;6.47e-15;34!UBERON:0002224;6.47e-15;34!UBERON:0005181;7.31e-15;35!UBERON:0007196;2.85e-14;15!UBERON:0001558;2.85e-14;15!UBERON:0002185;8.41e-12;5!UBERON:0004802;6.10e-11;19!UBERON:0000115;6.10e-11;19!UBERON:0000065;8.70e-11;44!UBERON:0000072;1.24e-10;37!UBERON:0002048;2.27e-09;22!UBERON:0004807;2.27e-09;22!UBERON:0000117;2.27e-09;22!UBERON:0000171;2.27e-09;22!UBERON:0000170;2.27e-09;22!UBERON:0001723;7.12e-09;3!UBERON:0001033;7.12e-09;3!UBERON:0000485;1.48e-08;7!UBERON:0003126;2.13e-08;7!UBERON:0001005;2.13e-08;7!UBERON:0000915;7.75e-08;52!UBERON:0003343;7.41e-07;4!UBERON:0004785;7.41e-07;4!UBERON:0000964;7.41e-07;4!UBERON:0010409;7.41e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.40e-19,3;UBERON:0002031,2.40e-19,3;UBERON:0000065,5.06e-16,54;UBERON:0005178,6.18e-16,34;UBERON:0002224,6.18e-16,34;UBERON:0005181,1.98e-15,35;UBERON:0007196,2.57e-14,15;UBERON:0001558,2.57e-14,15;UBERON:0000072,2.04e-13,47;UBERON:0001004,7.42e-13,74;UBERON:0000915,6.15e-12,52;UBERON:0002185,8.13e-12,5;UBERON:0008947,1.89e-11,38;UBERON:0003258,1.89e-11,38;UBERON:0004802,5.85e-11,19;UBERON:0000115,5.85e-11,19;UBERON:0002048,2.19e-09,22;UBERON:0000117,2.19e-09,22;UBERON:0000171,2.19e-09,22;UBERON:0000170,2.19e-09,22;UBERON:0005597,2.19e-09,22;UBERON:0000118,2.19e-09,22;UBERON:0004119,2.94e-09,160;UBERON:0000925,2.94e-09,160;UBERON:0006595,2.94e-09,160;UBERON:0001041,4.93e-09,87;UBERON:0005157,7.45e-09,47;UBERON:0001723,1.02e-08,3;UBERON:0001033,1.02e-08,3;UBERON:0010056,1.02e-08,3;UBERON:0003126,1.95e-08,7;UBERON:0001005,1.95e-08,7;UBERON:0004807,3.00e-07,28;UBERON:0005153,3.92e-07,37;UBERON:0004921,5.08e-07,118;UBERON:0003343,7.87e-07,4;UBERON:0004785,7.87e-07,4;UBERON:0000964,8.34e-07,4;UBERON:0010409,8.34e-07,4;UBERON:0004348,8.34e-07,4;UBERON:0005427,8.34e-07,4;UBERON:0000485,9.43e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,2.75826367343678,6.92773613189975,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,2.96627554227544,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0.573609190778008,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.98775256867763,0,1.3068766413512,0.555530670951178,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,4.68669169933885,0.503946384596579,0.283550194484773,0,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.80455823272956,0.920809889358963,0,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,1.34533047155574,1.02090169995667,0.910420027699949,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0.75894634753143,0,1.34710957815717,3.35151137767894,4.3556393944529,0,0.43050537267123,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0.852408440419239,0.23874448473769,0,0,0,0.140669416410513,0,0.824019371133798,0.211125408127993,0,0,0.251932747854276,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0,0,2.08342208868187,0.962059999958153,0,3.07242310370849,0.508507300585533,0.945550727071745,0.344743373241465,0,0.347249989866585,0,0.482385754501632,0,0,0,0.438770794307945,0.544692317594951,1.95193241990045,0.0769502585037971,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,1.14262965711403,0.424059214301822,0.216388639742091,0,0.619202951523374,0.611030144933625,0,0.494255755786011,0.313265848516366,0,0,0.468528891450678,0,0.586993856796269,0,0,0,0.61214552326098,0,0,0,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,0.391969589657511,1.30588809870604,0,0,0,0,0,1.16386819786103,0,0,0.137041924646751,0,0.126621591911757,0.195551382734803,0.160317640503067,0.426905989478705,0.19980960958213,2.88180834308212,0,0,0,0.248505071130865,1.41416420770077,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,11.0693446907758,0.0788057072991982,0.0524545881349981,0,1.25501137532991,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.339936274560377,0,0,0,0.13223260174269,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0,0.138258436151731,0,0.132864840313363,0,0,0.245772908753719,1.47918486351039,0,0.320075189082423,0,0,0,0.559518030877778,0,0,0.431299245586727,0,1.09209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0.321146125482298,0,0,0.205116364240755,0.504143392443436,0.138314504928436,0.161475645631851,0,0.490738592505128,0.353909170043221,1.28400018965175,2.4260389891571,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.351742488719241,0.638812138197976,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,0.472775363535873,0.667388411352415,0.078493092850514,0.942693539496011,0,0,0,0.9555033757741,0,0.158013611732727,0.464965701472501,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0.118332000730565,0,0,0.4582137370881,0,0,0.111855431797792,0.490751168076215,1.82876887473404,0,0,0,0,0.467878926924211,0.397901550322736,0,0.45178432815584,0.109940516745429,0.603851374266694,0.385870790539723,0.218559560503957,0.470317296361523,0,0.942706188406504,0.196308467114945,0,0,0,0,0,0,0.892769693028288,0,0.0802413666891683,0,0.458729283404541,0,0,0.27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| |||
|short_description=p5@F12 | |||
}} |
Latest revision as of 06:14, 17 September 2015
Short description: | p5@F12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_F12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504406_5end |
EntrezGene: | F12 |
HGNC: | 3530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.40e-28 | 13 |
epithelial cell of tracheobronchial tree | 3.18e-24 | 9 |
epithelial cell of lower respiratory tract | 3.18e-24 | 9 |
bronchial epithelial cell | 2.40e-19 | 3 |
duct epithelial cell | 4.98e-19 | 3 |
branched duct epithelial cell | 4.98e-19 | 3 |
tracheal epithelial cell | 4.98e-19 | 3 |
tracheoblast | 4.98e-19 | 3 |
endo-epithelial cell | 3.08e-18 | 42 |
epithelial cell | 3.14e-14 | 253 |
corneal epithelial cell | 9.05e-13 | 2 |
endodermal cell | 1.47e-12 | 58 |
epithelial cell of lung | 5.85e-11 | 19 |
lung fibroblast | 3.02e-07 | 1 |
general ecto-epithelial cell | 5.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.19e-08 | 106 |
adenocarcinoma | 4.42e-08 | 25 |
skin squamous cell carcinoma | 9.91e-08 | 1 |
keratoacanthoma | 9.91e-08 | 1 |
cystadenocarcinoma | 3.21e-07 | 1 |
mucinous cystadenocarcinoma | 3.21e-07 | 1 |
squamous cell carcinoma | 5.94e-07 | 14 |