FFCP PHASE1:Hg19::chr1:153579934..153579986,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153579934..153579986,- to FFCP PHASE1:Hg19::chr1:153579934..153579986,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_U23859_5end | |||
|cluster_id=chr1:153579934..153579986,- | |||
|description=CAGE_peak_9_at_S100A16_5end | |||
|id=chr1:153579934..153579986,- | |||
|ontology_enrichment_celltype=CL:0000220!1.00e-21!246;CL:0002321!2.72e-21!248;CL:0000222!2.16e-18!119;CL:0000066!8.86e-14!254;CL:0000055!1.68e-10!180;CL:0000213!1.60e-09!57;CL:0000215!1.60e-09!57;CL:0000183!1.63e-09!59;CL:0002078!4.03e-09!44;CL:0000359!4.26e-09!32;CL:0000680!4.73e-09!57;CL:0000056!4.73e-09!57;CL:0000355!4.73e-09!57;CL:0000192!7.12e-09!42;CL:0000514!7.12e-09!42;CL:0002139!1.74e-08!24;CL:0000187!2.19e-08!54;CL:0000115!3.50e-08!35;CL:0000076!4.28e-08!62;CL:0000071!1.12e-07!18;CL:0002546!1.12e-07!18;CL:0000393!6.57e-07!60;CL:0000211!6.57e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.33e-11;24!CL:0000115;4.13e-10;36!CL:0000071;2.95e-09;18!CL:0002078;1.57e-08;45!CL:0000359;3.18e-08;32!CL:0000213;8.74e-08;58!CL:0000215;8.74e-08;58!CL:1000449;6.91e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.14e-18,250;CL:0000222,2.48e-17,121;CL:0000115,8.79e-12,36;CL:0000213,9.06e-12,58;CL:0000215,9.06e-12,58;CL:0002078,2.80e-11,45;CL:0002139,6.95e-11,24;CL:0000066,1.80e-10,253;CL:0000071,2.63e-09,18;CL:0002546,2.63e-09,18;CL:0000359,8.63e-09,32;CL:0000192,5.05e-08,43;CL:0000514,5.05e-08,43;CL:0000076,1.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.95e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.34e-21!118;UBERON:0004872!2.28e-19!84;UBERON:0002100!5.85e-19!216;UBERON:0005256!2.32e-17!143;UBERON:0000490!6.33e-17!138;UBERON:0001981!7.53e-17!60;UBERON:0007500!7.53e-17!60;UBERON:0004537!7.53e-17!60;UBERON:0006965!7.53e-17!60;UBERON:0000055!1.64e-16!69;UBERON:0002049!2.04e-15!79;UBERON:0007798!2.04e-15!79;UBERON:0000483!6.24e-15!309;UBERON:0000119!1.29e-14!312;UBERON:0000475!6.22e-14!365;UBERON:0003104!8.82e-14!238;UBERON:0009142!8.82e-14!238;UBERON:0001637!1.10e-13!42;UBERON:0003509!1.10e-13!42;UBERON:0004572!1.10e-13!42;UBERON:0000486!9.72e-13!82;UBERON:0004111!2.23e-12!241;UBERON:0000477!3.09e-12!286;UBERON:0000467!4.16e-12!625;UBERON:0000480!6.71e-12!626;UBERON:0000468!1.43e-11!659;UBERON:0000914!4.72e-11!83;UBERON:0002329!4.72e-11!83;UBERON:0003077!4.72e-11!83;UBERON:0003059!4.72e-11!83;UBERON:0007282!4.72e-11!83;UBERON:0009618!4.72e-11!83;UBERON:0007285!4.72e-11!83;UBERON:0000481!7.43e-11!347;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0003102!2.34e-10!95;UBERON:0004535!2.68e-10!110;UBERON:0004290!3.63e-10!70;UBERON:0001009!1.03e-09!113;UBERON:0000926!1.24e-09!448;UBERON:0004120!1.24e-09!448;UBERON:0006603!1.24e-09!448;UBERON:0002385!1.63e-08!63;UBERON:0001015!1.63e-08!63;UBERON:0000383!1.63e-08!63;UBERON:0000923!1.76e-08!604;UBERON:0005291!1.76e-08!604;UBERON:0006598!1.76e-08!604;UBERON:0002532!1.76e-08!604;UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0002050!2.60e-08!605;UBERON:0005423!2.60e-08!605;UBERON:0001134!2.74e-08!61;UBERON:0002036!2.74e-08!61;UBERON:0003082!2.74e-08!61;UBERON:0000466!4.93e-08!126;UBERON:0006914!6.71e-08!25;UBERON:0000487!7.79e-08!22;UBERON:0000922!9.35e-08!612;UBERON:0001986!1.12e-07!18;UBERON:0004638!1.12e-07!18;UBERON:0004852!1.12e-07!18;UBERON:0000464!1.49e-07!104;UBERON:0000025!1.68e-07!194;UBERON:0003064!1.99e-07!37;UBERON:0009569!5.52e-07!113;UBERON:0004923!7.25e-07!57;UBERON:0003886!9.19e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.79e-10;42!UBERON:0003509;4.79e-10;42!UBERON:0004572;4.79e-10;42!UBERON:0007500;4.93e-10;56!UBERON:0001981;4.93e-10;56!UBERON:0004537;4.93e-10;56!UBERON:0003914;8.46e-10;74!UBERON:0004573;9.05e-10;33!UBERON:0004571;9.05e-10;33!UBERON:0004638;2.95e-09;18!UBERON:0001986;2.95e-09;18!UBERON:0004852;2.95e-09;18!UBERON:0006914;3.10e-09;25!UBERON:0000487;7.48e-09;22!UBERON:0000055;3.36e-08;65!UBERON:0000490;4.38e-08;33!UBERON:0000025;1.26e-07;93!UBERON:0002049;4.68e-07;75!UBERON:0007798;4.68e-07;75!UBERON:0006555;6.91e-07;15!UBERON:0004819;6.91e-07;15!UBERON:0001285;6.91e-07;15!UBERON:0007684;6.91e-07;15 | |||
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|short_description=p9@S100A16 | |||
}} | }} |
Latest revision as of 06:15, 17 September 2015
Short description: | p9@S100A16 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_S100A16_5end |
Coexpression cluster: | NA |
Association with transcript: | -251bp_to_U23859_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.14e-18 | 250 |
mesodermal cell | 2.48e-17 | 121 |
endothelial cell | 8.79e-12 | 36 |
lining cell | 9.06e-12 | 58 |
barrier cell | 9.06e-12 | 58 |
meso-epithelial cell | 2.80e-11 | 45 |
endothelial cell of vascular tree | 6.95e-11 | 24 |
epithelial cell | 1.80e-10 | 253 |
blood vessel endothelial cell | 2.63e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.63e-09 | 18 |
vascular associated smooth muscle cell | 8.63e-09 | 32 |
smooth muscle cell | 5.05e-08 | 43 |
smooth muscle myoblast | 5.05e-08 | 43 |
squamous epithelial cell | 1.14e-07 | 63 |