FFCP PHASE1:Hg19::chr16:59204024..59204025,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:59204024..59204025,+
|short_description=p@chr16:59204024..59204025,+
|description=CAGE_peak_at_chr16:59204024..59204025,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:59204024..59204025,+ | |||
|description=CAGE_peak_at_chr16:59204024..59204025,+ | |||
|id=chr16:59204024..59204025,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.09e-12;15!CL:0000125;1.09e-12;15!CL:0000095;1.81e-11;17!CL:0002319;2.22e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.09e-12,15;CL:0000125,1.09e-12,15;CL:0000030,1.09e-12,15;CL:0000339,1.09e-12,15;CL:0000095,1.81e-11,17;CL:0000123,1.81e-11,17;CL:0002319,2.22e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.46e-50;1!UBERON:0005425;3.99e-50;1!UBERON:0006238;5.63e-19;10!UBERON:0003056;9.45e-18;3!CL:0000339;1.09e-12;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.71e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.71e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-24!57;UBERON:0005068!1.31e-24!57;UBERON:0006241!1.31e-24!57;UBERON:0007135!1.31e-24!57;UBERON:0001017!2.22e-22!82;UBERON:0005743!5.82e-21!86;UBERON:0000955!1.62e-20!69;UBERON:0006238!1.62e-20!69;UBERON:0000073!8.88e-20!94;UBERON:0001016!8.88e-20!94;UBERON:0002616!1.37e-19!59;UBERON:0002780!3.37e-19!41;UBERON:0001890!3.37e-19!41;UBERON:0006240!3.37e-19!41;UBERON:0002020!6.89e-19!34;UBERON:0003528!6.89e-19!34;UBERON:0003080!1.26e-18!42;UBERON:0003075!3.05e-18!86;UBERON:0007284!3.05e-18!86;UBERON:0007023!9.27e-18!115;UBERON:0002346!4.39e-17!90;UBERON:0001893!1.09e-16!34;UBERON:0001869!7.91e-16!32;UBERON:0002791!2.51e-15!33;UBERON:0002420!2.35e-13!9;UBERON:0007245!2.35e-13!9;UBERON:0010009!2.35e-13!9;UBERON:0010011!2.35e-13!9;UBERON:0000454!2.35e-13!9;UBERON:0000349!2.47e-13!5;UBERON:0002308!1.71e-12!9;UBERON:0000125!1.71e-12!9;UBERON:0004121!2.00e-11!169;UBERON:0002619!2.20e-11!22;UBERON:0003056!2.63e-11!61;UBERON:0000924!5.95e-11!173;UBERON:0006601!5.95e-11!173;UBERON:0002298!2.73e-10!8;UBERON:0000153!2.78e-10!129;UBERON:0007811!2.78e-10!129;UBERON:0000033!2.78e-10!123;UBERON:0000956!8.69e-10!25;UBERON:0000203!8.69e-10!25;UBERON:0009663!9.37e-09!7;UBERON:0001950!2.13e-08!20;UBERON:0001896!6.11e-08!3;UBERON:0005290!6.11e-08!3;UBERON:0010096!6.11e-08!3;UBERON:0006331!1.13e-07!3;UBERON:0003076!3.52e-07!15;UBERON:0003057!3.52e-07!15;UBERON:0001876!8.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0001781,1.13e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000010,8.37e-07,8 | |||
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| ||
|short_description=p@chr16:59204024..59204025,+ | |||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p@chr16:59204024..59204025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:59204024..59204025, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.09e-12 | 15 |
glial cell | 1.09e-12 | 15 |
glioblast | 1.09e-12 | 15 |
glioblast (sensu Vertebrata) | 1.09e-12 | 15 |
neuron associated cell | 1.81e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.81e-11 | 17 |
neural cell | 2.22e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.99e-50 | 1 |
cranial nerve | 3.99e-50 | 1 |
nerve trunk | 3.99e-50 | 1 |
nerve connecting eye with brain | 3.99e-50 | 1 |
nerve | 3.99e-50 | 1 |
retinal neural layer | 3.99e-50 | 1 |
presumptive neural retina | 3.99e-50 | 1 |
neural tissue | 7.14e-26 | 2 |
multi cell component structure | 7.14e-26 | 2 |
neuron projection bundle | 7.14e-26 | 2 |
layer of retina | 1.13e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.71e-17 | 11 |