FFCP PHASE1:Hg19::chr9:35732647..35732678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10488 | |EntrezGene=10488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2347 | |HGNC=2347 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000486056_5end | |association_with_transcript=52bp_to_ENST00000486056_5end | ||
|cluster_id=chr9:35732647..35732678,+ | |||
|description=CAGE_peak_2_at_CREB3_5end | |description=CAGE_peak_2_at_CREB3_5end | ||
|id=chr9:35732647..35732678,+ | |id=chr9:35732647..35732678,+ | ||
|ontology_enrichment_celltype=CL:0000359;1.13e-16;32!CL:0000192;9.61e-14;43!CL:0000187;1.38e-08;55!CL:0000134;2.78e-07;55!CL:0002539;5.37e-07;10!CL:0000393;8.29e-07;61!CL:0000211;8.29e-07;61 | |ontology_enrichment_celltype=CL:0000548!9.83e-30!679;CL:0000004!9.83e-30!679;CL:0000255!9.83e-30!679;CL:0000012!6.72e-29!682;CL:0000222!4.57e-25!119;CL:0000144!6.69e-25!625;CL:0002371!3.63e-23!591;CL:0000220!2.00e-21!246;CL:0002321!6.47e-21!248;CL:0000192!3.00e-19!42;CL:0000514!3.00e-19!42;CL:0000055!1.10e-18!180;CL:0000359!1.46e-17!32;CL:0000680!3.84e-17!57;CL:0000056!3.84e-17!57;CL:0000355!3.84e-17!57;CL:0000183!1.64e-16!59;CL:0000187!3.02e-16!54;CL:0000003!3.39e-14!722;CL:0000393!5.31e-14!60;CL:0000211!5.31e-14!60;CL:0000063!4.09e-10!578;CL:0000048!1.94e-09!430;CL:0000723!5.91e-09!436;CL:0000034!5.13e-08!444;CL:0000213!7.23e-08!57;CL:0000215!7.23e-08!57;CL:0000057!1.28e-07!75;CL:0000066!5.53e-07!254;CL:0002539!5.54e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;1.13e-16;32!CL:0000192;9.61e-14;43!CL:0000187;1.38e-08;55!CL:0000134;2.78e-07;55!CL:0002539;5.37e-07;10!CL:0000393;8.29e-07;61!CL:0000211;8.29e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.15e-25,121;CL:0002321,1.25e-20,250;CL:0000192,7.38e-19,43;CL:0000514,7.38e-19,43;CL:0000359,1.09e-17,32;CL:0000680,6.71e-17,58;CL:0000056,6.71e-17,58;CL:0000355,6.71e-17,58;CL:0000187,5.35e-16,55;CL:0000393,8.25e-14,61;CL:0000211,8.25e-14,61;CL:0000048,2.27e-10,427;CL:0000723,8.71e-10,433;CL:0000034,7.89e-09,441;CL:0000213,6.70e-08,58;CL:0000215,6.70e-08,58;CL:0000057,6.87e-08,76;CL:0002539,5.02e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;9.61e-14;43!CL:0000355;6.06e-09;58!CL:0000222;8.20e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001637;6.70e-14;42!UBERON:0003509;6.70e-14;42!UBERON:0004572;6.70e-14;42!UBERON:0004573;6.82e-14;33!UBERON:0004571;6.82e-14;33!UBERON:0007500;5.54e-11;56!UBERON:0001981;5.54e-11;56!UBERON:0004537;5.54e-11;56!UBERON:0000055;7.40e-10;65!UBERON:0003914;2.66e-09;74!UBERON:0000947;2.01e-08;21!UBERON:0010191;2.01e-08;21!UBERON:0002049;2.34e-08;75!UBERON:0007798;2.34e-08;75!UBERON:0004237;5.37e-07;10!UBERON:0004695;5.37e-07;10!UBERON:0002111;5.37e-07;10!UBERON:0004178;5.37e-07;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.05e-21!448;UBERON:0004120!3.05e-21!448;UBERON:0006603!3.05e-21!448;UBERON:0000055!5.79e-20!69;UBERON:0001637!1.67e-19!42;UBERON:0003509!1.67e-19!42;UBERON:0004572!1.67e-19!42;UBERON:0003914!3.08e-19!118;UBERON:0002049!3.56e-19!79;UBERON:0007798!3.56e-19!79;UBERON:0001981!2.59e-18!60;UBERON:0007500!2.59e-18!60;UBERON:0004537!2.59e-18!60;UBERON:0006965!2.59e-18!60;UBERON:0004872!1.55e-17!84;UBERON:0005256!2.66e-17!143;UBERON:0002100!1.79e-16!216;UBERON:0000490!2.64e-16!138;UBERON:0000486!2.31e-15!82;UBERON:0004573!2.93e-15!33;UBERON:0004571!2.93e-15!33;UBERON:0004290!4.79e-15!70;UBERON:0000914!9.06e-15!83;UBERON:0002329!9.06e-15!83;UBERON:0003077!9.06e-15!83;UBERON:0003059!9.06e-15!83;UBERON:0007282!9.06e-15!83;UBERON:0009618!9.06e-15!83;UBERON:0007285!9.06e-15!83;UBERON:0001134!1.23e-14!61;UBERON:0002036!1.23e-14!61;UBERON:0003082!1.23e-14!61;UBERON:0004535!2.02e-14!110;UBERON:0002385!3.78e-14!63;UBERON:0001015!3.78e-14!63;UBERON:0000383!3.78e-14!63;UBERON:0001009!1.07e-13!113;UBERON:0003104!1.48e-13!238;UBERON:0009142!1.48e-13!238;UBERON:0000480!3.65e-12!626;UBERON:0000467!4.37e-12!625;UBERON:0003081!4.81e-11!216;UBERON:0000468!1.87e-10!659;UBERON:0002204!1.35e-09!167;UBERON:0000947!1.94e-08!21;UBERON:0010191!1.94e-08!21;UBERON:0004237!5.54e-07!10;UBERON:0004695!5.54e-07!10;UBERON:0002111!5.54e-07!10;UBERON:0004178!5.54e-07!10;UBERON:0002050!7.75e-07!605;UBERON:0005423!7.75e-07!605;UBERON:0000923!8.08e-07!604;UBERON:0005291!8.08e-07!604;UBERON:0006598!8.08e-07!604;UBERON:0002532!8.08e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.70e-14;42!UBERON:0003509;6.70e-14;42!UBERON:0004572;6.70e-14;42!UBERON:0004573;6.82e-14;33!UBERON:0004571;6.82e-14;33!UBERON:0007500;5.54e-11;56!UBERON:0001981;5.54e-11;56!UBERON:0004537;5.54e-11;56!UBERON:0000055;7.40e-10;65!UBERON:0003914;2.66e-09;74!UBERON:0000947;2.01e-08;21!UBERON:0010191;2.01e-08;21!UBERON:0002049;2.34e-08;75!UBERON:0007798;2.34e-08;75!UBERON:0004237;5.37e-07;10!UBERON:0004695;5.37e-07;10!UBERON:0002111;5.37e-07;10!UBERON:0004178;5.37e-07;10 | |||
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| ||
|short_description=p2@CREB3 | |short_description=p2@CREB3 | ||
}} | }} |
Latest revision as of 08:44, 17 September 2015
Short description: | p2@CREB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CREB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000486056_5end |
EntrezGene: | CREB3 |
HGNC: | 2347 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.15e-25 | 121 |
embryonic cell | 1.25e-20 | 250 |
smooth muscle cell | 7.38e-19 | 43 |
smooth muscle myoblast | 7.38e-19 | 43 |
vascular associated smooth muscle cell | 1.09e-17 | 32 |
muscle precursor cell | 6.71e-17 | 58 |
myoblast | 6.71e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.71e-17 | 58 |
muscle cell | 5.35e-16 | 55 |
electrically responsive cell | 8.25e-14 | 61 |
electrically active cell | 8.25e-14 | 61 |
multi fate stem cell | 2.27e-10 | 427 |
somatic stem cell | 8.71e-10 | 433 |
stem cell | 7.89e-09 | 441 |
lining cell | 6.70e-08 | 58 |
barrier cell | 6.70e-08 | 58 |
fibroblast | 6.87e-08 | 76 |
aortic smooth muscle cell | 5.02e-07 | 10 |