FFCP PHASE1:Hg19::chr1:28212441..28212464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9473 | |EntrezGene=9473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16839 | |HGNC=16839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_AF323721_5end | |association_with_transcript=4bp_to_AF323721_5end | ||
|cluster_id=chr1:28212441..28212464,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_3_at_C1orf38_5end | |description=CAGE_peak_3_at_C1orf38_5end | ||
|id=chr1:28212441..28212464,+ | |id=chr1:28212441..28212464,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.69e-59!42;CL:0000766!5.28e-56!76;CL:0000860!1.19e-54!45;CL:0002194!1.79e-47!63;CL:0000576!1.79e-47!63;CL:0000040!1.79e-47!63;CL:0000559!1.79e-47!63;CL:0002009!1.37e-45!65;CL:0000738!4.27e-42!140;CL:0000839!2.36e-41!70;CL:0000763!1.37e-40!112;CL:0000049!1.37e-40!112;CL:0000557!1.41e-40!71;CL:0000037!2.63e-34!172;CL:0000566!2.63e-34!172;CL:0002087!5.29e-33!119;CL:0000988!2.55e-31!182;CL:0002032!5.44e-31!165;CL:0000837!5.44e-31!165;CL:0002031!1.41e-26!124;CL:0002393!1.02e-17!9;CL:0002397!1.02e-17!9;CL:0000094!4.71e-16!8;CL:0000081!3.75e-11!11;CL:0000134!9.23e-10!358;CL:0002320!3.17e-09!365;CL:0000775!1.95e-07!3;CL:0000219!2.23e-07!390;CL:0000842!7.57e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.69e-59!42;CL:0000766!5.28e-56!76;CL:0000860!1.19e-54!45;CL:0002194!1.79e-47!63;CL:0000576!1.79e-47!63;CL:0000040!1.79e-47!63;CL:0000559!1.79e-47!63;CL:0002009!1.37e-45!65;CL:0000738!4.27e-42!140;CL:0000839!2.36e-41!70;CL:0000763!1.37e-40!112;CL:0000049!1.37e-40!112;CL:0000557!1.41e-40!71;CL:0000037!2.63e-34!172;CL:0000566!2.63e-34!172;CL:0002087!5.29e-33!119;CL:0000988!2.55e-31!182;CL:0002032!5.44e-31!165;CL:0000837!5.44e-31!165;CL:0002031!1.41e-26!124;CL:0002393!1.02e-17!9;CL:0002397!1.02e-17!9;CL:0000094!4.71e-16!8;CL:0000081!3.75e-11!11;CL:0000134!9.23e-10!358;CL:0002320!3.17e-09!365;CL:0000775!1.95e-07!3;CL:0000219!2.23e-07!390;CL:0000842!7.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-42;33!CL:0002057;6.45e-42;33!CL:0000576;1.46e-41;48!CL:0000473;1.47e-36;39!CL:0000234;1.47e-36;39!CL:0000766;8.53e-36;69!CL:0002393;2.81e-30;6!CL:0002397;2.81e-30;6!CL:0000094;4.05e-23;8!CL:0000775;1.17e-16;3!CL:0000081;1.20e-16;11!CL:0000763;1.04e-13;100!CL:0000771;9.23e-12;2!CL:0002087;2.31e-11;104!CL:0000738;1.78e-10;136!CL:0000226;1.07e-07;3!CL:0000842;1.07e-07;3!CL:0000875;1.69e-07;3!CL:0002396;1.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-79,42;CL:0002057,3.53e-79,42;CL:0000473,8.27e-74,48;CL:0000234,8.27e-74,48;CL:0000766,1.12e-71,72;CL:0002194,8.01e-58,59;CL:0000576,8.01e-58,59;CL:0000040,8.01e-58,59;CL:0000559,8.01e-58,59;CL:0002009,9.26e-56,61;CL:0000839,3.86e-51,66;CL:0000557,2.68e-50,67;CL:0000763,1.01e-45,108;CL:0000049,1.01e-45,108;CL:0000738,6.30e-40,136;CL:0002393,9.61e-35,9;CL:0002397,9.61e-35,9;CL:0002087,1.28e-31,115;CL:0000037,5.23e-31,168;CL:0000988,4.48e-29,177;CL:0002032,1.79e-28,161;CL:0000837,1.79e-28,161;CL:0002031,1.45e-25,120;CL:0000094,3.25e-23,8;CL:0000081,1.03e-16,11;CL:0000775,1.18e-16,3;CL:0000771,9.25e-12,2;CL:0000134,6.32e-11,354;CL:0002320,1.43e-10,361;CL:0000219,2.54e-09,386;CL:0000048,8.59e-08,427;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0000723,1.40e-07,433;CL:0000875,1.81e-07,3;CL:0002396,1.81e-07,3;CL:0000034,2.61e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.07e-52;42!CL:0000049;9.39e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-49!102;UBERON:0003061!1.23e-49!102;UBERON:0002193!2.85e-45!112;UBERON:0002371!1.79e-34!80;UBERON:0001474!4.06e-31!86;UBERON:0002405!3.01e-28!115;UBERON:0004765!1.68e-24!101;UBERON:0001434!1.68e-24!101;UBERON:0003081!6.00e-19!216;UBERON:0000178!1.26e-13!15;UBERON:0000179!1.26e-13!15;UBERON:0000463!1.26e-13!15;UBERON:0002204!1.41e-10!167;UBERON:0002384!1.67e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.23e-49!102;UBERON:0003061!1.23e-49!102;UBERON:0002193!2.85e-45!112;UBERON:0002371!1.79e-34!80;UBERON:0001474!4.06e-31!86;UBERON:0002405!3.01e-28!115;UBERON:0004765!1.68e-24!101;UBERON:0001434!1.68e-24!101;UBERON:0003081!6.00e-19!216;UBERON:0000178!1.26e-13!15;UBERON:0000179!1.26e-13!15;UBERON:0000463!1.26e-13!15;UBERON:0002204!1.41e-10!167;UBERON:0002384!1.67e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.74e-11;15!UBERON:0000179;3.74e-11;15!UBERON:0000463;3.74e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.64e-50,98;UBERON:0003061,2.64e-50,98;UBERON:0002193,4.70e-45,108;UBERON:0002371,1.06e-43,76;UBERON:0001474,4.28e-40,82;UBERON:0004765,5.00e-36,90;UBERON:0002405,1.11e-34,93;UBERON:0001434,7.54e-32,100;UBERON:0003081,8.19e-21,203;UBERON:0002204,1.09e-16,167;UBERON:0000178,2.89e-11,15;UBERON:0000179,2.89e-11,15;UBERON:0000463,2.89e-11,15;UBERON:0000926,6.31e-11,315;UBERON:0004120,6.31e-11,315;UBERON:0006603,6.31e-11,315;UBERON:0002384,4.36e-10,371 | |||
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|short_description=p3@C1orf38 | |short_description=p3@C1orf38 | ||
}} | }} |
Latest revision as of 09:15, 17 September 2015
Short description: | p3@C1orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1orf38_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 4bp_to_AF323721_5end |
EntrezGene: | C1orf38 |
HGNC: | 16839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.64e-50 | 98 |
blood island | 2.64e-50 | 98 |
hemolymphoid system | 4.70e-45 | 108 |
bone marrow | 1.06e-43 | 76 |
bone element | 4.28e-40 | 82 |
skeletal element | 5.00e-36 | 90 |
immune system | 1.11e-34 | 93 |
skeletal system | 7.54e-32 | 100 |
lateral plate mesoderm | 8.19e-21 | 203 |
musculoskeletal system | 1.09e-16 | 167 |
blood | 2.89e-11 | 15 |
haemolymphatic fluid | 2.89e-11 | 15 |
organism substance | 2.89e-11 | 15 |
mesoderm | 6.31e-11 | 315 |
mesoderm-derived structure | 6.31e-11 | 315 |
presumptive mesoderm | 6.31e-11 | 315 |
connective tissue | 4.36e-10 | 371 |