FFCP PHASE1:Hg19::chr2:148778570..148778589,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:148778570..148778589,+ to FFCP PHASE1:Hg19::chr2:148778570..148778589,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55777 | |EntrezGene=55777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20444 | |HGNC=20444 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P267 | |UniProt=Q9P267 | ||
|association_with_transcript=0bp_to_ENST00000407073,ENST00000488372,NM_018328,uc002twm.3_5end | |||
|cluster_id=chr2:148778570..148778589,+ | |||
|description=CAGE_peak_4_at_MBD5_5end | |||
|id=chr2:148778570..148778589,+ | |||
|ontology_enrichment_celltype=CL:0002032!1.46e-12!165;CL:0000837!1.46e-12!165;CL:0000037!2.58e-12!172;CL:0000566!2.58e-12!172;CL:0000738!4.20e-11!140;CL:0000763!4.17e-10!112;CL:0000049!4.17e-10!112;CL:0000988!9.88e-10!182;CL:0002031!1.60e-09!124;CL:0002087!4.67e-08!119;CL:0000766!5.26e-08!76;CL:0000839!5.93e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.79e-13,161;CL:0000837,1.79e-13,161;CL:0000037,3.81e-13,168;CL:0000738,3.53e-12,136;CL:0000763,2.68e-11,108;CL:0000049,2.68e-11,108;CL:0000988,9.23e-11,177;CL:0002031,1.51e-10,120;CL:0000766,2.05e-09,72;CL:0002087,6.03e-09,115;CL:0000839,2.76e-08,66;CL:0000557,7.99e-08,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-37!115;UBERON:0001049!5.99e-12!57;UBERON:0005068!5.99e-12!57;UBERON:0006241!5.99e-12!57;UBERON:0007135!5.99e-12!57;UBERON:0003080!7.17e-11!42;UBERON:0002780!2.01e-10!41;UBERON:0001890!2.01e-10!41;UBERON:0006240!2.01e-10!41;UBERON:0002390!4.38e-10!102;UBERON:0003061!4.38e-10!102;UBERON:0002616!1.84e-09!59;UBERON:0002193!1.14e-08!112;UBERON:0002020!7.06e-08!34;UBERON:0003528!7.06e-08!34;UBERON:0001893!9.51e-08!34;UBERON:0000955!1.08e-07!69;UBERON:0006238!1.08e-07!69;UBERON:0002791!1.72e-07!33;UBERON:0001869!3.19e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.56e-10;114!UBERON:0002780;1.82e-07;41!UBERON:0001890;1.82e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.30e-37,114;UBERON:0001049,1.29e-11,56;UBERON:0005068,1.29e-11,56;UBERON:0006241,1.29e-11,56;UBERON:0007135,1.29e-11,56;UBERON:0002390,3.12e-11,98;UBERON:0003061,3.12e-11,98;UBERON:0000073,4.72e-11,53;UBERON:0002616,4.72e-11,53;UBERON:0002780,1.50e-10,41;UBERON:0001890,1.50e-10,41;UBERON:0003080,1.50e-10,41;UBERON:0006240,1.50e-10,41;UBERON:0002193,1.14e-09,108;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0001893,7.75e-08,34;UBERON:0000955,1.52e-07,68;UBERON:0006238,1.52e-07,68;UBERON:0002791,2.16e-07,32;UBERON:0001869,2.65e-07,32 | |||
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| ||
|short_description=p4@MBD5 | |||
}} | }} |
Latest revision as of 09:47, 17 September 2015
Short description: | p4@MBD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MBD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407073, ENST00000488372, NM_018328, uc002twm.3_5end |
EntrezGene: | MBD5 |
HGNC: | 20444 |
UniProt: | Q9P267 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.79e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-13 | 161 |
hematopoietic stem cell | 3.81e-13 | 168 |
leukocyte | 3.53e-12 | 136 |
myeloid cell | 2.68e-11 | 108 |
common myeloid progenitor | 2.68e-11 | 108 |
hematopoietic cell | 9.23e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.51e-10 | 120 |
myeloid leukocyte | 2.05e-09 | 72 |
nongranular leukocyte | 6.03e-09 | 115 |
myeloid lineage restricted progenitor cell | 2.76e-08 | 66 |
granulocyte monocyte progenitor cell | 7.99e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.30e-37 | 114 |
neural tube | 1.29e-11 | 56 |
neural rod | 1.29e-11 | 56 |
future spinal cord | 1.29e-11 | 56 |
neural keel | 1.29e-11 | 56 |
hematopoietic system | 3.12e-11 | 98 |
blood island | 3.12e-11 | 98 |
regional part of nervous system | 4.72e-11 | 53 |
regional part of brain | 4.72e-11 | 53 |
regional part of forebrain | 1.50e-10 | 41 |
forebrain | 1.50e-10 | 41 |
anterior neural tube | 1.50e-10 | 41 |
future forebrain | 1.50e-10 | 41 |
hemolymphoid system | 1.14e-09 | 108 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 7.75e-08 | 34 |
brain | 1.52e-07 | 68 |
future brain | 1.52e-07 | 68 |
regional part of telencephalon | 2.16e-07 | 32 |
cerebral hemisphere | 2.65e-07 | 32 |