FFCP PHASE1:Hg19::chr13:44453642..44453659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144811 | |EntrezGene=144811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26789 | |HGNC=26789 | ||
|TSSclassifier=strong | |||
|UniProt=A2A3Z5 | |UniProt=A2A3Z5 | ||
|association_with_transcript=-34bp_to_ENST00000425906_5end | |association_with_transcript=-34bp_to_ENST00000425906_5end | ||
|cluster_id=chr13:44453642..44453659,+ | |||
|description=CAGE_peak_6_at_LACC1_5end | |description=CAGE_peak_6_at_LACC1_5end | ||
|id=chr13:44453642..44453659,+ | |id=chr13:44453642..44453659,+ | ||
|ontology_enrichment_celltype=CL:0000860;8.84e-36;33!CL:0002057;8.84e-36;33!CL:0000473;4.02e-31;39!CL:0000234;4.02e-31;39!CL:0000576;2.06e-25;48!CL:0000766;6.00e-16;69!CL:0000763;6.62e-15;100!CL:0000097;6.98e-07;5 | |ontology_enrichment_celltype=CL:0000763!7.70e-19!112;CL:0000049!7.70e-19!112;CL:0000557!2.26e-18!71;CL:0000839!1.33e-16!70;CL:0002009!2.78e-15!65;CL:0002194!9.05e-15!63;CL:0000576!9.05e-15!63;CL:0000040!9.05e-15!63;CL:0000559!9.05e-15!63;CL:0002057!1.02e-14!42;CL:0000766!4.44e-14!76;CL:0000860!1.61e-12!45;CL:0002032!7.71e-12!165;CL:0000837!7.71e-12!165;CL:0000037!4.54e-11!172;CL:0000566!4.54e-11!172;CL:0000988!2.82e-09!182;CL:0002031!6.22e-09!124;CL:0000738!3.49e-07!140;CL:0002087!5.71e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.84e-36;33!CL:0002057;8.84e-36;33!CL:0000473;4.02e-31;39!CL:0000234;4.02e-31;39!CL:0000576;2.06e-25;48!CL:0000766;6.00e-16;69!CL:0000763;6.62e-15;100!CL:0000097;6.98e-07;5 | ||
|ontology_enrichment_disease=DOID:8692;8.63e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000557,9.06e-42,67;CL:0000763,5.17e-39,108;CL:0000049,5.17e-39,108;CL:0000839,6.29e-38,66;CL:0000473,3.04e-35,48;CL:0000234,3.04e-35,48;CL:0002009,5.79e-35,61;CL:0002194,2.59e-34,59;CL:0000576,2.59e-34,59;CL:0000040,2.59e-34,59;CL:0000559,2.59e-34,59;CL:0000766,8.44e-34,72;CL:0000860,1.15e-33,42;CL:0002057,1.15e-33,42;CL:0002032,3.75e-27,161;CL:0000837,3.75e-27,161;CL:0000037,1.58e-26,168;CL:0000988,2.38e-24,177;CL:0002031,8.15e-23,120;CL:0000738,1.24e-18,136;CL:0002087,5.12e-18,115;CL:0000134,6.09e-10,354;CL:0002320,6.30e-10,361;CL:0000048,3.42e-08,427;CL:0000723,7.72e-08,433;CL:0000034,8.06e-08,441;CL:0000219,1.19e-07,386;CL:0000097,8.23e-07,5;CL:0002028,8.23e-07,5;CL:0002619,9.69e-07,3 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;8.60e-26;42!CL:0000049;9.46e-14;108 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;8.63e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.54e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.74e-15!80;UBERON:0001474!5.15e-14!86;UBERON:0004765!6.32e-14!101;UBERON:0001434!6.32e-14!101;UBERON:0002390!2.05e-12!102;UBERON:0003061!2.05e-12!102;UBERON:0002193!1.66e-11!112;UBERON:0002204!1.78e-08!167;UBERON:0001049!7.77e-08!57;UBERON:0005068!7.77e-08!57;UBERON:0006241!7.77e-08!57;UBERON:0007135!7.77e-08!57;UBERON:0002405!9.97e-08!115;UBERON:0002780!3.90e-07!41;UBERON:0001890!3.90e-07!41;UBERON:0006240!3.90e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.42e-37,76;UBERON:0001474,1.07e-33,82;UBERON:0002390,1.74e-32,98;UBERON:0003061,1.74e-32,98;UBERON:0004765,4.14e-31,90;UBERON:0002405,6.86e-30,93;UBERON:0002193,8.97e-30,108;UBERON:0001434,9.73e-27,100;UBERON:0002204,3.43e-17,167;UBERON:0003081,6.97e-15,203;UBERON:0002384,3.29e-09,371 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0.369754010166788,2.32401601740905,0.710846162437108,1.46800219667424,0,0,0.434021741431704,1.56740831967947,2.26725566213286,1.54545340580512,3.05336301437086,4.91238726795452,4.85168122375632,1.85943229524548,1.6446715520873,2.78735733805593,4.60307827715441,4.35473201099471,4.02019790810595,1.72372840368309,1.29096936716765,2.70852973188684,2.44715041405386,2.72906150057846,3.37085226667627,1.53041946185451,4.49300637906531,1.91801137739712,7.58657990429447,5.98390972864896,5.11469700639233,0.290209238628584,0,0.622822248995575,7.78870862295904,6.25779502104242,5.42972111762792,1.81619850790011,0.736555271975129,0.316462387440884,0.845021145247767,0,1.04829322754188,0,0.450530678524519,1.12507910687956,0,0,1.64397738388171,1.75996244461323,1.09227722252426,0,0.853460445133014,0.800791974072025,0.574752439954483,2.64417949113945,0,0,0.587237189370939,0.764546456250458,0,0,1.05353633910031,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.779873198196215,0,0.443067789167242,2.16643091012012,0.640456598628376,0.520237390239513,0.164437904603676,0,0.579606171470105,0,0.267540828089713,1.04535523804977,0.226618685395132,0,0,1.51811815211702,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0,1.67360306382335,0,0.760272105718513,0,0.367663080345869,0,0.625098097988558,0.22452937262617,0.675668882899933,1.53316637465883,0,0.183201743930407,0,0,0,0,0.759783069987479,1.32409180813219,0.860509862246441,1.06400514659507,0,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0.312160076830321,1.1409436430889,0.448346041655403,0.117434498643765,0,0.140450806702248,1.42907919878425,0.122834317311768,1.03325781175765,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0.554128230968366,0,0.30648779579902,0.45071417671979,0.226864366320042,0.179389635688862,0.640672166455702,1.05965950579781,0.300091096084402,0,0.515281080091258,0,0.506328996723799,0.389748020644795,0.252433774244115,0.184099797284599,1.45481451136931,0.710019185033229,0.302256294682921,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,1.23108503043699,0.702012795417713,0.445893486866185,0.93733833986777,0.16798212819886,0,0.358234090811393,0,0,2.46331618947972,3.69803422855549,1.65862492432618,0.576479813667846,1.00993946741104,0.190493682876507,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,1.2162378064119,2.51128545716063,0,0,0,0,0.868687840005475,0,0.179060963239896,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0.207970861530807,0.535286966391485,0,0.234282829985426,0,2.27407504055985,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0,0,0,0.744323423456331,0.460385919864187,0,0.512556597022804,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.660075999364704,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0,0,1.06461206063404,1.73986598415015,0,0,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.272999822815972,0.565621727814851,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,1.70894156152249,0.238231775457789,1.64544909234478,1.94541993357815,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0.798317485731266,2.10655907145603,2.32840940996271,0.324621940274555,2.52717460302113,0.228234679033192,0,2.50634477090067,2.03150133361924,0.963528450622197,1.21079824314629,0.851692475380653,3.09154810280188,0.30724076430845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| ||
|short_description=p6@LACC1 | |short_description=p6@LACC1 | ||
}} | }} |
Latest revision as of 10:39, 17 September 2015
Short description: | p6@LACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LACC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000425906_5end |
EntrezGene: | LACC1 |
HGNC: | 26789 |
UniProt: | A2A3Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.42e-37 | 76 |
bone element | 1.07e-33 | 82 |
hematopoietic system | 1.74e-32 | 98 |
blood island | 1.74e-32 | 98 |
skeletal element | 4.14e-31 | 90 |
immune system | 6.86e-30 | 93 |
hemolymphoid system | 8.97e-30 | 108 |
skeletal system | 9.73e-27 | 100 |
musculoskeletal system | 3.43e-17 | 167 |
lateral plate mesoderm | 6.97e-15 | 203 |
connective tissue | 3.29e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.54e-07 | 31 |