FFCP PHASE1:Hg19::chr1:154946792..154946823,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154946792..154946823,- to FFCP PHASE1:Hg19::chr1:154946792..154946823,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T182 | |UniProt=Q5T182 | ||
|association_with_transcript=0bp_to_ENST00000412170_5end | |||
|cluster_id=chr1:154946792..154946823,- | |||
|description=CAGE_peak_6_at_SHC1_5end | |||
|id=chr1:154946792..154946823,- | |||
|ontology_enrichment_celltype=CL:0000548!1.99e-27!679;CL:0000004!1.99e-27!679;CL:0000255!1.99e-27!679;CL:0000012!6.38e-27!682;CL:0002371!8.85e-25!591;CL:0000144!2.77e-23!625;CL:0000222!8.66e-21!119;CL:0000063!2.90e-18!578;CL:0000220!3.75e-17!246;CL:0002321!2.91e-16!248;CL:0000003!3.00e-16!722;CL:0000115!1.45e-15!35;CL:0002139!1.06e-14!24;CL:0000066!1.74e-14!254;CL:0000213!3.51e-13!57;CL:0000215!3.51e-13!57;CL:0002078!3.74e-13!44;CL:0000071!5.76e-12!18;CL:0002546!5.76e-12!18;CL:0000183!1.76e-09!59;CL:0000076!8.05e-09!62;CL:0000680!8.63e-09!57;CL:0000056!8.63e-09!57;CL:0000355!8.63e-09!57;CL:0000055!1.08e-08!180;CL:0000187!1.83e-08!54;CL:0000192!2.81e-08!42;CL:0000514!2.81e-08!42;CL:0000057!5.13e-08!75;CL:1000413!2.78e-07!9;CL:0000723!4.04e-07!436;CL:0000048!5.03e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-14;24!CL:0000115;1.70e-13;36!CL:0000071;5.33e-12;18!CL:0002078;4.14e-09;45!CL:0000213;2.05e-08;58!CL:0000215;2.05e-08;58!CL:1000413;2.36e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-21,121;CL:0002321,3.92e-17,250;CL:0000115,4.11e-16,36;CL:0002139,9.81e-15,24;CL:0000066,4.14e-14,253;CL:0000213,1.14e-13,58;CL:0000215,1.14e-13,58;CL:0002078,1.16e-13,45;CL:0000071,5.41e-12,18;CL:0002546,5.41e-12,18;CL:0000680,3.77e-09,58;CL:0000056,3.77e-09,58;CL:0000355,3.77e-09,58;CL:0000076,5.53e-09,63;CL:0000187,7.99e-09,55;CL:0000192,1.18e-08,43;CL:0000514,1.18e-08,43;CL:0000057,5.46e-08,76;CL:1000413,2.69e-07,9;CL:0000723,5.35e-07,433;CL:0000048,6.67e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002546;5.33e-12;18!CL:0000222;9.42e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.01e-22!118;UBERON:0002049!3.47e-20!79;UBERON:0007798!3.47e-20!79;UBERON:0000055!1.10e-19!69;UBERON:0004872!1.35e-16!84;UBERON:0001981!1.08e-15!60;UBERON:0007500!1.08e-15!60;UBERON:0004537!1.08e-15!60;UBERON:0006965!1.08e-15!60;UBERON:0000490!1.83e-15!138;UBERON:0000926!9.95e-15!448;UBERON:0004120!9.95e-15!448;UBERON:0006603!9.95e-15!448;UBERON:0004535!3.65e-14!110;UBERON:0005256!4.17e-13!143;UBERON:0001009!4.70e-13!113;UBERON:0001986!5.76e-12!18;UBERON:0004638!5.76e-12!18;UBERON:0004852!5.76e-12!18;UBERON:0001637!2.23e-11!42;UBERON:0003509!2.23e-11!42;UBERON:0004572!2.23e-11!42;UBERON:0002100!2.44e-11!216;UBERON:0000487!4.45e-11!22;UBERON:0006914!2.49e-10!25;UBERON:0000486!8.74e-10!82;UBERON:0003104!1.57e-09!238;UBERON:0009142!1.57e-09!238;UBERON:0003081!1.22e-08!216;UBERON:0004573!1.44e-08!33;UBERON:0004571!1.44e-08!33;UBERON:0004290!2.22e-08!70;UBERON:0000914!9.99e-08!83;UBERON:0002329!9.99e-08!83;UBERON:0003077!9.99e-08!83;UBERON:0003059!9.99e-08!83;UBERON:0007282!9.99e-08!83;UBERON:0009618!9.99e-08!83;UBERON:0007285!9.99e-08!83;UBERON:0002385!1.22e-07!63;UBERON:0001015!1.22e-07!63;UBERON:0000383!1.22e-07!63;UBERON:0001134!2.69e-07!61;UBERON:0002036!2.69e-07!61;UBERON:0003082!2.69e-07!61;UBERON:0003915!2.78e-07!9;UBERON:0004700!2.78e-07!9;UBERON:0001917!2.78e-07!9;UBERON:0000947!3.53e-07!21;UBERON:0010191!3.53e-07!21;UBERON:0000480!8.99e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.33e-12;18!UBERON:0001986;5.33e-12;18!UBERON:0004852;5.33e-12;18!UBERON:0000487;3.39e-11;22!UBERON:0000055;7.54e-11;65!UBERON:0006914;2.71e-10;25!UBERON:0007500;3.40e-10;56!UBERON:0001981;3.40e-10;56!UBERON:0004537;3.40e-10;56!UBERON:0003914;1.27e-09;74!UBERON:0002049;2.18e-09;75!UBERON:0007798;2.18e-09;75!UBERON:0001637;8.04e-09;42!UBERON:0003509;8.04e-09;42!UBERON:0004572;8.04e-09;42!UBERON:0004573;3.66e-08;33!UBERON:0004571;3.66e-08;33!UBERON:0000490;7.73e-08;33!UBERON:0003915;2.36e-07;9!UBERON:0004700;2.36e-07;9!UBERON:0001917;2.36e-07;9!UBERON:0000947;2.91e-07;21!UBERON:0010191;2.91e-07;21 | |||
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| ||
|short_description=p6@SHC1 | |||
}} | }} |
Latest revision as of 10:51, 17 September 2015
Short description: | p6@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412170_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T182 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.07e-21 | 121 |
embryonic cell | 3.92e-17 | 250 |
endothelial cell | 4.11e-16 | 36 |
endothelial cell of vascular tree | 9.81e-15 | 24 |
epithelial cell | 4.14e-14 | 253 |
lining cell | 1.14e-13 | 58 |
barrier cell | 1.14e-13 | 58 |
meso-epithelial cell | 1.16e-13 | 45 |
blood vessel endothelial cell | 5.41e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.41e-12 | 18 |
muscle precursor cell | 3.77e-09 | 58 |
myoblast | 3.77e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.77e-09 | 58 |
squamous epithelial cell | 5.53e-09 | 63 |
muscle cell | 7.99e-09 | 55 |
smooth muscle cell | 1.18e-08 | 43 |
smooth muscle myoblast | 1.18e-08 | 43 |
fibroblast | 5.46e-08 | 76 |
endothelial cell of artery | 2.69e-07 | 9 |
somatic stem cell | 5.35e-07 | 433 |
multi fate stem cell | 6.67e-07 | 427 |