FFCP PHASE1:Hg19::chr12:133147970..133148014,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:133147970..133148014,+ to FFCP PHASE1:Hg19::chr12:133147970..133148014,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57666 | |EntrezGene=57666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29308 | |HGNC=29308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000536075_5end | |||
|cluster_id=chr12:133147970..133148014,+ | |||
|description=CAGE_peak_4_at_FBRSL1_5end | |||
|id=chr12:133147970..133148014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.69e-11!235;DOID:14566!1.39e-10!239;DOID:0050687!2.44e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.05e-14!57;UBERON:0005068!3.05e-14!57;UBERON:0006241!3.05e-14!57;UBERON:0007135!3.05e-14!57;UBERON:0003080!9.88e-14!42;UBERON:0002780!1.63e-13!41;UBERON:0001890!1.63e-13!41;UBERON:0006240!1.63e-13!41;UBERON:0001017!1.64e-12!82;UBERON:0000073!2.39e-12!94;UBERON:0001016!2.39e-12!94;UBERON:0005743!3.89e-12!86;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0001893!3.63e-11!34;UBERON:0000955!3.71e-11!69;UBERON:0006238!3.71e-11!69;UBERON:0001869!6.19e-11!32;UBERON:0002791!6.29e-11!33;UBERON:0002619!1.56e-10!22;UBERON:0002616!3.01e-10!59;UBERON:0000956!8.34e-10!25;UBERON:0000203!8.34e-10!25;UBERON:0001950!2.01e-09!20;UBERON:0002346!7.68e-09!90;UBERON:0003056!1.87e-08!61;UBERON:0003075!5.31e-08!86;UBERON:0007284!5.31e-08!86;UBERON:0007023!7.04e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.60e-11;22!UBERON:0000956;3.33e-10;25!UBERON:0000203;3.33e-10;25!UBERON:0001950;4.40e-10;20!UBERON:0002780;7.07e-10;41!UBERON:0001890;7.07e-10;41!UBERON:0002791;1.88e-09;32!UBERON:0001869;2.60e-09;32!UBERON:0003528;7.14e-09;34!UBERON:0002020;7.14e-09;34!UBERON:0001893;1.79e-08;34!UBERON:0000073;1.57e-07;53!UBERON:0002616;1.57e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-14,56;UBERON:0005068,1.03e-14,56;UBERON:0006241,1.03e-14,56;UBERON:0007135,1.03e-14,56;UBERON:0000073,2.87e-13,53;UBERON:0002616,2.87e-13,53;UBERON:0001017,3.17e-13,81;UBERON:0002780,3.48e-13,41;UBERON:0001890,3.48e-13,41;UBERON:0003080,3.48e-13,41;UBERON:0006240,3.48e-13,41;UBERON:0001016,8.10e-13,89;UBERON:0002619,1.12e-11,22;UBERON:0000955,1.28e-11,68;UBERON:0006238,1.28e-11,68;UBERON:0002791,2.42e-10,32;UBERON:0001950,3.17e-10,20;UBERON:0003528,3.27e-10,34;UBERON:0002020,3.27e-10,34;UBERON:0000956,3.50e-10,25;UBERON:0000203,3.50e-10,25;UBERON:0001869,3.58e-10,32;UBERON:0001893,4.42e-10,34;UBERON:0002346,5.22e-10,86;UBERON:0003075,2.93e-09,82;UBERON:0007284,2.93e-09,82;UBERON:0003056,1.70e-07,61;UBERON:0007023,2.37e-07,114;UBERON:0010371,7.48e-07,104 | |||
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|short_description=p4@FBRSL1 | |||
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Latest revision as of 11:02, 17 September 2015
Short description: | p4@FBRSL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FBRSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000536075_5end |
EntrezGene: | FBRSL1 |
HGNC: | 29308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.03e-14 | 56 |
neural rod | 1.03e-14 | 56 |
future spinal cord | 1.03e-14 | 56 |
neural keel | 1.03e-14 | 56 |
regional part of nervous system | 2.87e-13 | 53 |
regional part of brain | 2.87e-13 | 53 |
central nervous system | 3.17e-13 | 81 |
regional part of forebrain | 3.48e-13 | 41 |
forebrain | 3.48e-13 | 41 |
anterior neural tube | 3.48e-13 | 41 |
future forebrain | 3.48e-13 | 41 |
nervous system | 8.10e-13 | 89 |
regional part of cerebral cortex | 1.12e-11 | 22 |
brain | 1.28e-11 | 68 |
future brain | 1.28e-11 | 68 |
regional part of telencephalon | 2.42e-10 | 32 |
neocortex | 3.17e-10 | 20 |
brain grey matter | 3.27e-10 | 34 |
gray matter | 3.27e-10 | 34 |
cerebral cortex | 3.50e-10 | 25 |
pallium | 3.50e-10 | 25 |
cerebral hemisphere | 3.58e-10 | 32 |
telencephalon | 4.42e-10 | 34 |
neurectoderm | 5.22e-10 | 86 |
neural plate | 2.93e-09 | 82 |
presumptive neural plate | 2.93e-09 | 82 |
pre-chordal neural plate | 1.70e-07 | 61 |
adult organism | 2.37e-07 | 114 |
ecto-epithelium | 7.48e-07 | 104 |