FFCP PHASE1:Hg19::chr2:47596603..47596624,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:47596603..47596624,+
|short_description=p3@EPCAM
|description=CAGE_peak_3_at_EPCAM_5end
|association_with_transcript=0bp_to_ENST00000474691_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474691_5end | |||
|cluster_id=chr2:47596603..47596624,+ | |||
|description=CAGE_peak_3_at_EPCAM_5end | |||
|id=chr2:47596603..47596624,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.14e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.13e-08;7!CL:0000586;3.13e-08;7!CL:0000453;3.69e-08;5!CL:1000507;3.47e-07;10!CL:1000494;3.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.42e-13,253;CL:0000453,3.92e-08,5;CL:0000039,4.86e-08,7;CL:0000586,4.86e-08,7;CL:1000507,2.52e-07,10;CL:1000494,2.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.58e-10;30 | |||
|ontology_enrichment_disease=DOID:305!2.40e-26!106;DOID:0050687!1.30e-18!143;DOID:14566!6.09e-09!239;DOID:162!6.34e-09!235;DOID:299!6.71e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.67e-12;25!DOID:305;1.48e-11;106!DOID:1036;2.77e-07;8!DOID:0050615;3.05e-07;16!DOID:3119;6.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.51e-33,106;DOID:0050687,2.07e-24,143;DOID:162,7.81e-15,235;DOID:14566,4.46e-14,239;DOID:299,4.86e-12,25;DOID:0050686,4.50e-08,137;DOID:7,7.76e-08,39;DOID:1036,2.62e-07,8;DOID:0050615,2.76e-07,16;DOID:3119,7.10e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-11!115;UBERON:0001007!2.80e-10!155;UBERON:0001555!2.80e-10!155;UBERON:0007026!2.80e-10!155;UBERON:0000481!3.85e-09!347;UBERON:0002780!4.93e-09!41;UBERON:0001890!4.93e-09!41;UBERON:0006240!4.93e-09!41;UBERON:0004119!5.98e-09!169;UBERON:0000925!5.98e-09!169;UBERON:0006595!5.98e-09!169;UBERON:0001049!6.97e-09!57;UBERON:0005068!6.97e-09!57;UBERON:0006241!6.97e-09!57;UBERON:0007135!6.97e-09!57;UBERON:0003056!9.32e-09!61;UBERON:0003080!1.43e-08!42;UBERON:0000153!3.14e-08!129;UBERON:0007811!3.14e-08!129;UBERON:0004921!3.18e-08!129;UBERON:0004185!3.18e-08!129;UBERON:0005153!3.22e-08!37;UBERON:0000064!3.27e-08!219;UBERON:0003075!7.18e-08!86;UBERON:0007284!7.18e-08!86;UBERON:0000464!7.85e-08!104;UBERON:0005911!8.66e-08!82;UBERON:0005177!8.82e-08!107;UBERON:0000062!1.08e-07!511;UBERON:0000033!1.24e-07!123;UBERON:0000466!2.44e-07!126;UBERON:0002346!3.41e-07!90;UBERON:0005743!3.90e-07!86;UBERON:0002616!6.82e-07!59;UBERON:0000489!8.09e-07!32;UBERON:0002048!9.06e-07!22;UBERON:0000117!9.06e-07!22;UBERON:0000171!9.06e-07!22;UBERON:0000170!9.06e-07!22;UBERON:0005597!9.06e-07!22;UBERON:0000118!9.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.68e-10;22!UBERON:0000160;1.62e-08;17!UBERON:0002048;2.86e-07;22!UBERON:0000117;2.86e-07;22!UBERON:0000171;2.86e-07;22!UBERON:0000170;2.86e-07;22!UBERON:0000922;2.92e-07;49!UBERON:0004211;3.47e-07;10!UBERON:0009773;3.47e-07;10!UBERON:0001231;3.47e-07;10!UBERON:0004810;3.47e-07;10!UBERON:0002108;5.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-10,101;UBERON:0001007,3.41e-09,145;UBERON:0001555,3.41e-09,145;UBERON:0007026,3.41e-09,145;UBERON:0004921,1.64e-08,118;UBERON:0000160,1.75e-08,17;UBERON:0005409,4.60e-08,25;UBERON:0005911,6.36e-08,82;UBERON:0009569,2.18e-07,112;UBERON:0004810,2.52e-07,10;UBERON:0002048,2.71e-07,22;UBERON:0000117,2.71e-07,22;UBERON:0000171,2.71e-07,22;UBERON:0000170,2.71e-07,22;UBERON:0005597,2.71e-07,22;UBERON:0000118,2.71e-07,22;UBERON:0004119,3.39e-07,160;UBERON:0000925,3.39e-07,160;UBERON:0006595,3.39e-07,160;UBERON:0002108,8.06e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,1.22866968250754,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.958120975510189,0.251085279189606,0,0.0821005894499457,0.236132343941038,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,5.26768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.10864698731282,0.614843499851882,2.94702919869853,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625098097988558,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.491337269247072,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0.773043412653187,0.272746120590835,0.286804595389004,1.09776335516636,0.927708378250397,1.39432731443422,0.932949495138334,2.27088765788066,2.55484151353081,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0.343135620597051,0,0,0.301586917234893,0.740707561268237,0,0,0,2.31860809950154,0.70445216541493,0.144366447761074,0,0.190254152234598,5.53143078571493,0,0,0,0,0.93733833986777,0.16798212819886,0.850650583454319,0,0.581267877027924,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,6.40555082835598,0.200506470303285,0.644566922551274,0.229628896329213,0,0,1.35359883872224,4.62092022626489,0.784349769176855,2.92278449306521,5.91089121800104,0,0,0.647747748306418,0,0.812839312631559,2.50844886927427,3.82314409567557,1.66215201785745,1.11937377361089,2.19259876645935,1.8300481571743,1.53870075069834,0.984043937099117,2.92840555197873,0.309123034943167,4.67004270573551,5.44562699475881,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,54.2118640258508,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,2.43282702530686,0,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.140669416410513,0.333926115068718,0,1.47787785689595,0,1.38141957765574,10.3292426620253,0,0,0,1.97710372524119,0.716084698702437,0,0.0986434056369336,0,0,0.969332746095218,0.834912883456661,0,3.64598865519327,3.58585999984402,0,2.50345586228099,4.32231205497703,2.36387681767936,6.20538071834636,0,0,0.885741385813839,0.844175070377856,0,0,0,0,0,0.41827123283581,0.461701551022782,0,3.22789466143284,2.69272933229316,6.19290019955446,0.31900115973192,0.457987967009312,0,0,0,0.498635045700469,6.54227415789824,7.64643883839184,7.04850665298539,6.45162691262229,27.3370915846251,1.68798451622422,5.22344986109273,8.62253735747039,0,0.995261931078505,5.39591143470369,6.72133159426988,1.48260564340311,1.23563938946503,2.40170483862547,0.67401132980677,0,2.34264445725339,0.182454789215666,2.54364004611717,0,0.789168805698781,2.41981432097328,1.53036380815245,0,0.450970258243478,1.03688191397247,0,0,0,0,10.8151627491321,0,2.95051555169723,0.783939179315021,1.65412492502765,1.7472666824203,0.171986032471617,0.19351266257817,0.511625219603299,0.574808199372465,0.0969890164884194,0,0.451961481561065,0,0.19871461170299,0.569797163602908,2.34661659281764,2.48492342779755,1.06726497369676,0.999048047910651,1.44090417154106,0,18.1890697733682,2.88109595976299,1.86378803348149,0.942776138467182,0,0,0,0,0.600420288709789,0.136905378891993,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0,4.19325901047881,0,0.223171457441873,0.739018197353989,0,1.16495949527454,7.56318550149347,8.40641755487898,8.8972677887524,2.26383207483922,0,2.38568906942791,0.544813624446302,2.25054407851027,2.75078873194468,0.83088067605837,4.27450393947851,9.2856234546954,0.668245123238271,0.335434687599266,4.64953673065269,3.67182116944987,4.8576154798927,0.179287339332845,0.575745591958336,0,0,0,0,0,0.326587360109409,1.19730191562487,10.425750135166,0,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,2.81926008926669,1.49502377594773,1.41483874589699,1.24271716604159,0,0,0,0.638341257770182,0,0.2506898940227,0,0,5.4968933687582,0,0.244052529803926,0,1.14681839138014,0.443716206147409,0.807253238237985,0.138348634936231,0,0,0,0,6.08835377548946,4.20270982971393,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0.260994291965212,0,0.231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| ||
|short_description=p3@EPCAM | |||
}} | }} |
Latest revision as of 12:10, 17 September 2015
Short description: | p3@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474691_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.42e-13 | 253 |
Langerhans cell | 3.92e-08 | 5 |
germ line cell | 4.86e-08 | 7 |
germ cell | 4.86e-08 | 7 |
kidney tubule cell | 2.52e-07 | 10 |
nephron tubule epithelial cell | 2.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.14e-10 | 101 |
digestive system | 3.41e-09 | 145 |
digestive tract | 3.41e-09 | 145 |
primitive gut | 3.41e-09 | 145 |
subdivision of digestive tract | 1.64e-08 | 118 |
intestine | 1.75e-08 | 17 |
gastrointestinal system | 4.60e-08 | 25 |
endo-epithelium | 6.36e-08 | 82 |
subdivision of trunk | 2.18e-07 | 112 |
nephron tubule epithelium | 2.52e-07 | 10 |
lung | 2.71e-07 | 22 |
respiratory tube | 2.71e-07 | 22 |
respiration organ | 2.71e-07 | 22 |
pair of lungs | 2.71e-07 | 22 |
lung primordium | 2.71e-07 | 22 |
lung bud | 2.71e-07 | 22 |
endoderm-derived structure | 3.39e-07 | 160 |
endoderm | 3.39e-07 | 160 |
presumptive endoderm | 3.39e-07 | 160 |
small intestine | 8.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.51e-33 | 106 |
cell type cancer | 2.07e-24 | 143 |
cancer | 7.81e-15 | 235 |
disease of cellular proliferation | 4.46e-14 | 239 |
adenocarcinoma | 4.86e-12 | 25 |
organ system cancer | 4.50e-08 | 137 |
disease of anatomical entity | 7.76e-08 | 39 |
chronic leukemia | 2.62e-07 | 8 |
respiratory system cancer | 2.76e-07 | 16 |
gastrointestinal system cancer | 7.10e-07 | 14 |