FFCP PHASE1:Hg19::chr16:67880820..67880844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10204 | |EntrezGene=10204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13722 | |HGNC=13722 | ||
|TSSclassifier=strong | |||
|UniProt=P61970 | |UniProt=P61970 | ||
|association_with_transcript=1bp_to_NM_005796,uc002eup.2,uc010vkf.1_5end | |association_with_transcript=1bp_to_NM_005796,uc002eup.2,uc010vkf.1_5end | ||
|cluster_id=chr16:67880820..67880844,+ | |||
|coexpression_cluster_id=C2157 | |||
|description=CAGE_peak_1_at_NUTF2_5end | |description=CAGE_peak_1_at_NUTF2_5end | ||
|id=chr16:67880820..67880844,+ | |id=chr16:67880820..67880844,+ | ||
|ontology_enrichment_celltype=CL:0002321!5.03e-37!248;CL:0000220!1.16e-36!246;CL:0000548!1.31e-30!679;CL:0000004!1.31e-30!679;CL:0000255!1.31e-30!679;CL:0000012!1.74e-30!682;CL:0000066!1.91e-30!254;CL:0000222!3.35e-25!119;CL:0000144!7.27e-23!625;CL:0000003!1.28e-18!722;CL:0002371!2.13e-16!591;CL:0000055!6.36e-16!180;CL:0000213!3.53e-13!57;CL:0000215!3.53e-13!57;CL:0000076!3.89e-13!62;CL:0000183!4.16e-13!59;CL:0000393!7.21e-13!60;CL:0000211!7.21e-13!60;CL:0000187!2.89e-11!54;CL:0002078!4.66e-11!44;CL:0000680!4.76e-11!57;CL:0000056!4.76e-11!57;CL:0000355!4.76e-11!57;CL:0000115!1.28e-10!35;CL:0002139!8.03e-10!24;CL:1000449!1.08e-09!16;CL:0000192!1.29e-09!42;CL:0000514!1.29e-09!42;CL:0000063!3.48e-09!578;CL:0000071!4.84e-09!18;CL:0002546!4.84e-09!18;CL:0000359!5.91e-09!32;CL:1000497!2.45e-08!18;CL:0002518!2.45e-08!18;CL:0000221!7.32e-08!71;CL:0002681!7.67e-08!13;CL:0002584!7.67e-08!13;CL:1000507!2.40e-07!12;CL:1000494!2.40e-07!12;CL:0002077!8.16e-07!33 | |ontology_enrichment_celltype=CL:0002321!5.03e-37!248;CL:0000220!1.16e-36!246;CL:0000548!1.31e-30!679;CL:0000004!1.31e-30!679;CL:0000255!1.31e-30!679;CL:0000012!1.74e-30!682;CL:0000066!1.91e-30!254;CL:0000222!3.35e-25!119;CL:0000144!7.27e-23!625;CL:0000003!1.28e-18!722;CL:0002371!2.13e-16!591;CL:0000055!6.36e-16!180;CL:0000213!3.53e-13!57;CL:0000215!3.53e-13!57;CL:0000076!3.89e-13!62;CL:0000183!4.16e-13!59;CL:0000393!7.21e-13!60;CL:0000211!7.21e-13!60;CL:0000187!2.89e-11!54;CL:0002078!4.66e-11!44;CL:0000680!4.76e-11!57;CL:0000056!4.76e-11!57;CL:0000355!4.76e-11!57;CL:0000115!1.28e-10!35;CL:0002139!8.03e-10!24;CL:1000449!1.08e-09!16;CL:0000192!1.29e-09!42;CL:0000514!1.29e-09!42;CL:0000063!3.48e-09!578;CL:0000071!4.84e-09!18;CL:0002546!4.84e-09!18;CL:0000359!5.91e-09!32;CL:1000497!2.45e-08!18;CL:0002518!2.45e-08!18;CL:0000221!7.32e-08!71;CL:0002681!7.67e-08!13;CL:0002584!7.67e-08!13;CL:1000507!2.40e-07!12;CL:1000494!2.40e-07!12;CL:0002077!8.16e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.12e-10;15!CL:0002139;8.02e-10;24!CL:0000115;2.26e-09;36!CL:0000071;4.84e-09;18!CL:1000497;9.80e-09;17!CL:0002518;9.80e-09;17!CL:0002681;2.27e-08;12!CL:0002584;2.27e-08;12!CL:0000359;2.60e-08;32!CL:0000213;2.69e-08;58!CL:0000215;2.69e-08;58!CL:0002078;6.26e-08;45!CL:1000507;2.11e-07;10!CL:1000494;2.11e-07;10!CL:0000192;4.91e-07;43!CL:0000187;7.48e-07;55!CL:0000076;8.20e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.94e-37,250;CL:0000066,1.60e-30,253;CL:0000222,1.68e-25,121;CL:0000213,1.28e-13,58;CL:0000215,1.28e-13,58;CL:0000076,3.41e-13,63;CL:0000393,1.09e-12,61;CL:0000211,1.09e-12,61;CL:0002078,1.69e-11,45;CL:0000187,4.29e-11,55;CL:0000115,4.50e-11,36;CL:0000680,6.85e-11,58;CL:0000056,6.85e-11,58;CL:0000355,6.85e-11,58;CL:1000449,3.13e-10,15;CL:0002139,8.03e-10,24;CL:0000192,1.97e-09,43;CL:0000514,1.97e-09,43;CL:0000071,4.84e-09,18;CL:0002546,4.84e-09,18;CL:0000359,5.91e-09,32;CL:1000497,9.78e-09,17;CL:0002518,9.78e-09,17;CL:0002681,2.30e-08,12;CL:0002584,2.30e-08,12;CL:0000221,6.11e-08,72;CL:1000507,2.11e-07,10;CL:1000494,2.11e-07,10;CL:0002077,7.15e-07,34 | |||
|ontology_enrichment_development_v019=CL:0002546;4.84e-09;18!CL:0000222;3.54e-08;121!CL:0000514;4.91e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.82e-18!79;UBERON:0007798!8.82e-18!79;UBERON:0003914!8.07e-16!118;UBERON:0000055!7.18e-15!69;UBERON:0000490!2.83e-14!138;UBERON:0005256!1.93e-13!143;UBERON:0000486!2.09e-13!82;UBERON:0004872!2.47e-13!84;UBERON:0001981!2.70e-13!60;UBERON:0007500!2.70e-13!60;UBERON:0004537!2.70e-13!60;UBERON:0006965!2.70e-13!60;UBERON:0002100!7.20e-13!216;UBERON:0000914!1.85e-12!83;UBERON:0002329!1.85e-12!83;UBERON:0003077!1.85e-12!83;UBERON:0003059!1.85e-12!83;UBERON:0007282!1.85e-12!83;UBERON:0009618!1.85e-12!83;UBERON:0007285!1.85e-12!83;UBERON:0004290!2.39e-12!70;UBERON:0004535!3.54e-11!110;UBERON:0003104!4.83e-11!238;UBERON:0009142!4.83e-11!238;UBERON:0001637!6.94e-11!42;UBERON:0003509!6.94e-11!42;UBERON:0004572!6.94e-11!42;UBERON:0001009!1.05e-10!113;UBERON:0001134!2.36e-10!61;UBERON:0002036!2.36e-10!61;UBERON:0003082!2.36e-10!61;UBERON:0000119!5.29e-10!312;UBERON:0004211!1.08e-09!16;UBERON:0001285!1.08e-09!16;UBERON:0007684!1.08e-09!16;UBERON:0003220!1.08e-09!16;UBERON:0004208!1.08e-09!16;UBERON:0002385!2.10e-09!63;UBERON:0001015!2.10e-09!63;UBERON:0000383!2.10e-09!63;UBERON:0000483!3.35e-09!309;UBERON:0001986!4.84e-09!18;UBERON:0004638!4.84e-09!18;UBERON:0004852!4.84e-09!18;UBERON:0000487!6.11e-09!22;UBERON:0006555!2.52e-08!17;UBERON:0005103!2.52e-08!17;UBERON:0000083!2.52e-08!17;UBERON:0009201!2.52e-08!17;UBERON:0004819!2.52e-08!17;UBERON:0006553!2.52e-08!17;UBERON:0003074!2.52e-08!17;UBERON:0003060!2.52e-08!17;UBERON:0006914!5.51e-08!25;UBERON:0001225!7.67e-08!13;UBERON:0008987!7.67e-08!13;UBERON:0000353!1.13e-07!17;UBERON:0009773!2.40e-07!12;UBERON:0001231!2.40e-07!12;UBERON:0004810!2.40e-07!12;UBERON:0000080!3.22e-07!18;UBERON:0002120!3.22e-07!18;UBERON:0004875!3.22e-07!18;UBERON:0005721!3.22e-07!18;UBERON:0005754!3.22e-07!18;UBERON:0007297!3.22e-07!18;UBERON:0004573!3.78e-07!33;UBERON:0004571!3.78e-07!33;UBERON:0001851!4.08e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.19e-10;74!UBERON:0006555;3.12e-10;15!UBERON:0004819;3.12e-10;15!UBERON:0001285;3.12e-10;15!UBERON:0007684;3.12e-10;15!UBERON:0000490;4.68e-10;33!UBERON:0004638;4.84e-09;18!UBERON:0001986;4.84e-09;18!UBERON:0004852;4.84e-09;18!UBERON:0007500;5.08e-09;56!UBERON:0001981;5.08e-09;56!UBERON:0004537;5.08e-09;56!UBERON:0000487;6.18e-09;22!UBERON:0000353;1.82e-08;15!UBERON:0001225;2.27e-08;12!UBERON:0008987;2.27e-08;12!UBERON:0002049;2.73e-08;75!UBERON:0007798;2.73e-08;75!UBERON:0006914;5.58e-08;25!UBERON:0001637;7.50e-08;42!UBERON:0003509;7.50e-08;42!UBERON:0004572;7.50e-08;42!UBERON:0000055;8.39e-08;65!UBERON:0006554;8.81e-08;30!UBERON:0001008;8.81e-08;30!UBERON:0001851;1.72e-07;15!UBERON:0004211;2.11e-07;10!UBERON:0009773;2.11e-07;10!UBERON:0001231;2.11e-07;10!UBERON:0004810;2.11e-07;10!UBERON:0000025;2.47e-07;93!UBERON:0002113;3.04e-07;24!UBERON:0011143;3.04e-07;24!UBERON:0000119;3.85e-07;139 | |||
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| ||
|short_description=p1@NUTF2 | |short_description=p1@NUTF2 | ||
}} | }} |
Latest revision as of 12:13, 17 September 2015
Short description: | p1@NUTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUTF2_5end |
Coexpression cluster: | C2157_Mallassezderived_Smooth_Alveolar_Bronchial_Keratocytes_Tracheal_mesothelioma |
Association with transcript: | 1bp_to_NM_005796, uc002eup.2, uc010vkf.1_5end |
EntrezGene: | NUTF2 |
HGNC: | 13722 |
UniProt: | P61970 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.94e-37 | 250 |
epithelial cell | 1.60e-30 | 253 |
mesodermal cell | 1.68e-25 | 121 |
lining cell | 1.28e-13 | 58 |
barrier cell | 1.28e-13 | 58 |
squamous epithelial cell | 3.41e-13 | 63 |
electrically responsive cell | 1.09e-12 | 61 |
electrically active cell | 1.09e-12 | 61 |
meso-epithelial cell | 1.69e-11 | 45 |
muscle cell | 4.29e-11 | 55 |
endothelial cell | 4.50e-11 | 36 |
muscle precursor cell | 6.85e-11 | 58 |
myoblast | 6.85e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.85e-11 | 58 |
epithelial cell of nephron | 3.13e-10 | 15 |
endothelial cell of vascular tree | 8.03e-10 | 24 |
smooth muscle cell | 1.97e-09 | 43 |
smooth muscle myoblast | 1.97e-09 | 43 |
blood vessel endothelial cell | 4.84e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.84e-09 | 18 |
vascular associated smooth muscle cell | 5.91e-09 | 32 |
kidney cell | 9.78e-09 | 17 |
kidney epithelial cell | 9.78e-09 | 17 |
kidney cortical cell | 2.30e-08 | 12 |
renal cortical epithelial cell | 2.30e-08 | 12 |
ectodermal cell | 6.11e-08 | 72 |
kidney tubule cell | 2.11e-07 | 10 |
nephron tubule epithelial cell | 2.11e-07 | 10 |
ecto-epithelial cell | 7.15e-07 | 34 |