FFCP PHASE1:Hg19::chr20:62371727..62371771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56731 | |EntrezGene=56731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15930 | |HGNC=15930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485897_5end | |association_with_transcript=0bp_to_ENST00000485897_5end | ||
|cluster_id=chr20:62371727..62371771,+ | |||
|description=CAGE_peak_3_at_SLC2A4RG_5end | |description=CAGE_peak_3_at_SLC2A4RG_5end | ||
|id=chr20:62371727..62371771,+ | |id=chr20:62371727..62371771,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.00e-18!119;CL:0000220!2.01e-16!246;CL:0002321!8.96e-16!248;CL:0000066!1.02e-14!254;CL:0000183!3.01e-11!59;CL:0000548!5.71e-11!679;CL:0000004!5.71e-11!679;CL:0000255!5.71e-11!679;CL:0000012!7.25e-11!682;CL:0000003!1.48e-10!722;CL:0000680!2.26e-09!57;CL:0000056!2.26e-09!57;CL:0000355!2.26e-09!57;CL:0000213!2.36e-09!57;CL:0000215!2.36e-09!57;CL:0000187!2.51e-09!54;CL:0000055!1.02e-08!180;CL:0002078!2.56e-08!44;CL:0000115!1.17e-07!35;CL:0000076!3.04e-07!62;CL:0000393!5.32e-07!60;CL:0000211!5.32e-07!60;CL:0000192!5.40e-07!42;CL:0000514!5.40e-07!42 | |ontology_enrichment_celltype=CL:0000222!2.00e-18!119;CL:0000220!2.01e-16!246;CL:0002321!8.96e-16!248;CL:0000066!1.02e-14!254;CL:0000183!3.01e-11!59;CL:0000548!5.71e-11!679;CL:0000004!5.71e-11!679;CL:0000255!5.71e-11!679;CL:0000012!7.25e-11!682;CL:0000003!1.48e-10!722;CL:0000680!2.26e-09!57;CL:0000056!2.26e-09!57;CL:0000355!2.26e-09!57;CL:0000213!2.36e-09!57;CL:0000215!2.36e-09!57;CL:0000187!2.51e-09!54;CL:0000055!1.02e-08!180;CL:0002078!2.56e-08!44;CL:0000115!1.17e-07!35;CL:0000076!3.04e-07!62;CL:0000393!5.32e-07!60;CL:0000211!5.32e-07!60;CL:0000192!5.40e-07!42;CL:0000514!5.40e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.90e-19,121;CL:0002321,5.92e-16,250;CL:0000066,2.23e-14,253;CL:0000680,1.24e-09,58;CL:0000056,1.24e-09,58;CL:0000355,1.24e-09,58;CL:0000187,1.37e-09,55;CL:0000213,1.67e-09,58;CL:0000215,1.67e-09,58;CL:0002078,1.85e-08,45;CL:0000115,8.61e-08,36;CL:0000192,3.05e-07,43;CL:0000514,3.05e-07,43;CL:0000076,3.07e-07,63;CL:0000393,4.16e-07,61;CL:0000211,4.16e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!9.94e-15!138;UBERON:0003104!4.23e-14!238;UBERON:0009142!4.23e-14!238;UBERON:0005256!1.33e-12!143;UBERON:0003914!2.47e-11!118;UBERON:0002100!1.01e-10!216;UBERON:0002049!2.05e-09!79;UBERON:0007798!2.05e-09!79;UBERON:0000055!2.76e-09!69;UBERON:0004290!5.78e-09!70;UBERON:0000486!7.26e-09!82;UBERON:0001981!8.24e-09!60;UBERON:0007500!8.24e-09!60;UBERON:0004537!8.24e-09!60;UBERON:0006965!8.24e-09!60;UBERON:0001134!1.93e-08!61;UBERON:0002036!1.93e-08!61;UBERON:0003082!1.93e-08!61;UBERON:0000914!2.22e-08!83;UBERON:0002329!2.22e-08!83;UBERON:0003077!2.22e-08!83;UBERON:0003059!2.22e-08!83;UBERON:0007282!2.22e-08!83;UBERON:0009618!2.22e-08!83;UBERON:0007285!2.22e-08!83;UBERON:0002385!7.36e-08!63;UBERON:0001015!7.36e-08!63;UBERON:0000383!7.36e-08!63;UBERON:0006554!1.59e-07!44;UBERON:0004535!6.16e-07!110;UBERON:0004872!7.24e-07!84;UBERON:0001008!7.79e-07!45 | |ontology_enrichment_uberon=UBERON:0000490!9.94e-15!138;UBERON:0003104!4.23e-14!238;UBERON:0009142!4.23e-14!238;UBERON:0005256!1.33e-12!143;UBERON:0003914!2.47e-11!118;UBERON:0002100!1.01e-10!216;UBERON:0002049!2.05e-09!79;UBERON:0007798!2.05e-09!79;UBERON:0000055!2.76e-09!69;UBERON:0004290!5.78e-09!70;UBERON:0000486!7.26e-09!82;UBERON:0001981!8.24e-09!60;UBERON:0007500!8.24e-09!60;UBERON:0004537!8.24e-09!60;UBERON:0006965!8.24e-09!60;UBERON:0001134!1.93e-08!61;UBERON:0002036!1.93e-08!61;UBERON:0003082!1.93e-08!61;UBERON:0000914!2.22e-08!83;UBERON:0002329!2.22e-08!83;UBERON:0003077!2.22e-08!83;UBERON:0003059!2.22e-08!83;UBERON:0007282!2.22e-08!83;UBERON:0009618!2.22e-08!83;UBERON:0007285!2.22e-08!83;UBERON:0002385!7.36e-08!63;UBERON:0001015!7.36e-08!63;UBERON:0000383!7.36e-08!63;UBERON:0006554!1.59e-07!44;UBERON:0004535!6.16e-07!110;UBERON:0004872!7.24e-07!84;UBERON:0001008!7.79e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;8.75e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0003914;8.75e-07;74 | ||
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| ||
|short_description=p3@SLC2A4RG | |short_description=p3@SLC2A4RG | ||
}} | }} |
Latest revision as of 14:13, 17 September 2015
Short description: | p3@SLC2A4RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC2A4RG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485897_5end |
EntrezGene: | SLC2A4RG |
HGNC: | 15930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.90e-19 | 121 |
embryonic cell | 5.92e-16 | 250 |
epithelial cell | 2.23e-14 | 253 |
muscle precursor cell | 1.24e-09 | 58 |
myoblast | 1.24e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-09 | 58 |
muscle cell | 1.37e-09 | 55 |
lining cell | 1.67e-09 | 58 |
barrier cell | 1.67e-09 | 58 |
meso-epithelial cell | 1.85e-08 | 45 |
endothelial cell | 8.61e-08 | 36 |
smooth muscle cell | 3.05e-07 | 43 |
smooth muscle myoblast | 3.05e-07 | 43 |
squamous epithelial cell | 3.07e-07 | 63 |
electrically responsive cell | 4.16e-07 | 61 |
electrically active cell | 4.16e-07 | 61 |