FFCP PHASE1:Hg19::chr20:62679894..62679903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54345 | |EntrezGene=54345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11194 | |HGNC=11194 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-444bp_to_AF086136_5end | |association_with_transcript=-444bp_to_AF086136_5end | ||
|cluster_id=chr20:62679894..62679903,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_8_at_SOX18_5end | |description=CAGE_peak_8_at_SOX18_5end | ||
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|ontology_enrichment_celltype=CL:0000115!6.53e-15!35;CL:0002078!2.88e-14!44;CL:0000071!1.41e-13!18;CL:0002546!1.41e-13!18;CL:1000413!1.04e-12!9;CL:0000213!1.26e-10!57;CL:0000215!1.26e-10!57;CL:0002139!4.72e-10!24;CL:0000666!4.74e-08!4;CL:0002188!4.74e-08!4 | |ontology_enrichment_celltype=CL:0000115!6.53e-15!35;CL:0002078!2.88e-14!44;CL:0000071!1.41e-13!18;CL:0002546!1.41e-13!18;CL:1000413!1.04e-12!9;CL:0000213!1.26e-10!57;CL:0000215!1.26e-10!57;CL:0002139!4.72e-10!24;CL:0000666!4.74e-08!4;CL:0002188!4.74e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.83e-14;5!CL:1000746;9.89e-11;7!CL:1000612;9.89e-11;7!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12 | |ontology_enrichment_celltype_v019=CL:0002188;1.83e-14;5!CL:1000746;9.89e-11;7!CL:1000612;9.89e-11;7!CL:0002681;8.38e-07;12!CL:0002584;8.38e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.83e-14,5;CL:1000746,9.89e-11,7;CL:1000612,9.89e-11,7;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.41e-13!18;UBERON:0004638!1.41e-13!18;UBERON:0004852!1.41e-13!18;UBERON:0006914!6.72e-13!25;UBERON:0003915!1.04e-12!9;UBERON:0004700!1.04e-12!9;UBERON:0001917!1.04e-12!9;UBERON:0000487!5.14e-11!22;UBERON:0004872!1.01e-09!84;UBERON:0002084!1.63e-08!1;UBERON:0002082!1.63e-08!1;UBERON:0004706!1.63e-08!1;UBERON:0000029!1.75e-08!1;UBERON:0002135!2.50e-08!1;UBERON:0003914!1.37e-07!118 | |ontology_enrichment_uberon=UBERON:0001986!1.41e-13!18;UBERON:0004638!1.41e-13!18;UBERON:0004852!1.41e-13!18;UBERON:0006914!6.72e-13!25;UBERON:0003915!1.04e-12!9;UBERON:0004700!1.04e-12!9;UBERON:0001917!1.04e-12!9;UBERON:0000487!5.14e-11!22;UBERON:0004872!1.01e-09!84;UBERON:0002084!1.63e-08!1;UBERON:0002082!1.63e-08!1;UBERON:0004706!1.63e-08!1;UBERON:0000029!1.75e-08!1;UBERON:0002135!2.50e-08!1;UBERON:0003914!1.37e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0000074;9.89e-11;7!UBERON:0001229;9.89e-11;7!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0000074;9.89e-11;7!UBERON:0001229;9.89e-11;7!UBERON:0001225;8.38e-07;12!UBERON:0008987;8.38e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0003886,4.68e-12,54;UBERON:0002553,8.52e-11,61;UBERON:0010532,9.89e-11,7;UBERON:0000074,9.89e-11,7;UBERON:0001229,9.89e-11,7;UBERON:0001230,9.89e-11,7;UBERON:0003220,9.89e-11,7;UBERON:0005749,9.89e-11,7;UBERON:0004199,9.89e-11,7;UBERON:0004209,9.89e-11,7;UBERON:0004198,9.89e-11,7;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0004876,2.63e-07,11;UBERON:0002323,7.30e-07,46;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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|short_description=p8@SOX18 | |short_description=p8@SOX18 | ||
}} | }} |
Latest revision as of 15:12, 17 September 2015
Short description: | p8@SOX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SOX18_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -444bp_to_AF086136_5end |
EntrezGene: | SOX18 |
HGNC: | 11194 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.83e-14 | 5 |
glomerular cell | 9.89e-11 | 7 |
kidney corpuscule cell | 9.89e-11 | 7 |
kidney cortical cell | 8.38e-07 | 12 |
renal cortical epithelial cell | 8.38e-07 | 12 |