FFCP PHASE1:Hg19::chr11:32457413..32457431,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:32457413..32457431,- to FFCP PHASE1:Hg19::chr11:32457413..32457431,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7490 | |EntrezGene=7490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12796 | |HGNC=12796 | ||
|TSSclassifier=strong | |||
|UniProt=P19544 | |UniProt=P19544 | ||
|association_with_transcript=-237bp_to_ENST00000332351_5end | |||
|cluster_id=chr11:32457413..32457431,- | |||
|coexpression_cluster_id=C3143 | |||
|description=CAGE_peak_2_at_WT1_5end | |||
|id=chr11:32457413..32457431,- | |||
|ontology_enrichment_celltype=CL:0000077!2.49e-10!19;CL:1000507!3.32e-09!12;CL:1000494!3.32e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;6.21e-16;10!CL:1000494;6.21e-16;10!CL:1000449;2.80e-10;15!CL:1000497;5.99e-09;17!CL:0002518;5.99e-09;17!CL:0000650;1.42e-08;2!CL:1000500;1.42e-08;2!CL:1000618;1.42e-08;2!CL:1001318;1.42e-08;2!CL:0002173;1.42e-08;2!CL:0000077;6.59e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.77e-16,10;CL:1000494,4.77e-16,10;CL:1000449,2.37e-10,15;CL:1000497,5.17e-09,17;CL:0002518,5.17e-09,17;CL:0000650,1.43e-08,2;CL:1000500,1.43e-08,2;CL:1000618,1.43e-08,2;CL:1001318,1.43e-08,2;CL:0002173,1.43e-08,2;CL:0000077,6.52e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.18e-08;10!UBERON:0004872;7.18e-08;7 | |||
|ontology_enrichment_disease=DOID:8692!7.51e-22!31;DOID:1240!1.64e-17!39;DOID:2531!1.58e-12!51;DOID:0060083!1.58e-12!51;DOID:0050686!2.82e-12!137;DOID:2394!1.39e-10!14;DOID:14566!5.28e-09!239;DOID:1036!3.89e-08!8;DOID:162!4.45e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.33e-09;31!DOID:2394;5.52e-08;14!DOID:1240;5.15e-07;39!DOID:1036;6.89e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.98e-09,31;DOID:1240,3.52e-08,39;DOID:2394,6.06e-08,14;DOID:1036,6.84e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0003886!1.57e-13!63;UBERON:0002553!2.96e-11!70;UBERON:0002417!6.53e-11!61;UBERON:0000916!6.53e-11!61;UBERON:0005172!3.91e-10!55;UBERON:0005173!3.91e-10!55;UBERON:0003133!4.67e-10!48;UBERON:0003887!1.09e-09!21;UBERON:0009773!3.32e-09!12;UBERON:0001231!3.32e-09!12;UBERON:0004810!3.32e-09!12;UBERON:0000489!3.49e-09!32;UBERON:0003103!4.12e-09!69;UBERON:0002113!4.44e-09!27;UBERON:0003918!4.44e-09!27;UBERON:0005095!4.44e-09!27;UBERON:0007687!4.44e-09!27;UBERON:0000466!4.65e-09!126;UBERON:0000991!6.49e-09!21;UBERON:0009196!6.49e-09!21;UBERON:0009117!6.49e-09!21;UBERON:0005564!6.49e-09!21;UBERON:0000464!9.72e-09!104;UBERON:0004176!2.38e-08!22;UBERON:0004458!3.35e-08!49;UBERON:0000080!3.63e-08!18;UBERON:0002120!3.63e-08!18;UBERON:0004875!3.63e-08!18;UBERON:0005721!3.63e-08!18;UBERON:0005754!3.63e-08!18;UBERON:0007297!3.63e-08!18;UBERON:0002323!4.83e-08!46;UBERON:0005156!1.08e-07!59;UBERON:0000990!1.08e-07!59;UBERON:0006555!2.47e-07!17;UBERON:0005103!2.47e-07!17;UBERON:0000083!2.47e-07!17;UBERON:0009201!2.47e-07!17;UBERON:0004819!2.47e-07!17;UBERON:0006553!2.47e-07!17;UBERON:0003074!2.47e-07!17;UBERON:0003060!2.47e-07!17;UBERON:0004876!4.61e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.21e-16;10!UBERON:0009773;6.21e-16;10!UBERON:0001231;6.21e-16;10!UBERON:0004810;6.21e-16;10!UBERON:0006555;2.80e-10;15!UBERON:0004819;2.80e-10;15!UBERON:0001285;2.80e-10;15!UBERON:0007684;2.80e-10;15!UBERON:0002113;4.56e-10;24!UBERON:0011143;4.56e-10;24!UBERON:0003567;1.42e-08;2!UBERON:0003838;1.42e-08;2!UBERON:0003586;1.42e-08;2!UBERON:0005169;1.42e-08;2!UBERON:0002321;1.42e-08;2!UBERON:0005215;1.42e-08;2!UBERON:0002303;1.42e-08;2!UBERON:0002319;1.42e-08;2!UBERON:0005172;3.22e-08;52!UBERON:0005173;3.22e-08;52!UBERON:0000489;4.81e-08;29!UBERON:0000474;8.65e-08;37!UBERON:0006554;1.01e-07;30!UBERON:0001008;1.01e-07;30!UBERON:0003134;1.51e-07;33!UBERON:0003133;2.80e-07;44!UBERON:0000991;3.96e-07;21!UBERON:0003100;9.96e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.77e-16,10;UBERON:0005172,1.66e-12,54;UBERON:0005173,1.66e-12,54;UBERON:0006555,1.76e-12,16;UBERON:0004819,1.76e-12,16;UBERON:0002113,2.16e-11,26;UBERON:0003918,2.16e-11,26;UBERON:0011143,2.16e-11,26;UBERON:0005095,2.16e-11,26;UBERON:0007687,2.16e-11,26;UBERON:0002417,7.08e-11,60;UBERON:0000916,7.08e-11,60;UBERON:0003133,8.65e-11,48;UBERON:0004211,2.37e-10,15;UBERON:0009773,2.37e-10,15;UBERON:0001231,2.37e-10,15;UBERON:0001285,2.37e-10,15;UBERON:0007684,2.37e-10,15;UBERON:0004208,2.37e-10,15;UBERON:0000489,3.13e-09,31;UBERON:0003134,6.47e-09,37;UBERON:0000474,6.47e-09,37;UBERON:0003567,1.43e-08,2;UBERON:0003838,1.43e-08,2;UBERON:0003586,1.43e-08,2;UBERON:0005169,1.43e-08,2;UBERON:0002321,1.43e-08,2;UBERON:0005215,1.43e-08,2;UBERON:0002303,1.43e-08,2;UBERON:0002319,1.43e-08,2;UBERON:0005156,3.37e-08,59;UBERON:0000990,3.37e-08,59;UBERON:0003886,5.38e-08,54;UBERON:0003100,7.89e-08,41;UBERON:0003887,3.21e-07,12;UBERON:0000991,4.61e-07,21;UBERON:0009196,4.61e-07,21;UBERON:0009117,4.61e-07,21;UBERON:0005564,4.61e-07,21;UBERON:0005795,6.42e-07,22;UBERON:0002553,9.18e-07,61;UBERON:0005177,9.27e-07,101 | |||
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|short_description=p2@WT1 | |||
}} | }} |
Latest revision as of 15:37, 17 September 2015
Short description: | p2@WT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WT1_5end |
Coexpression cluster: | C3143_kidney_uterus_ovary_spleen_cervix_Renal_diaphragm |
Association with transcript: | -237bp_to_ENST00000332351_5end |
EntrezGene: | WT1 |
HGNC: | 12796 |
UniProt: | P19544 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.77e-16 | 10 |
nephron tubule epithelial cell | 4.77e-16 | 10 |
epithelial cell of nephron | 2.37e-10 | 15 |
kidney cell | 5.17e-09 | 17 |
kidney epithelial cell | 5.17e-09 | 17 |
mesangial cell | 1.43e-08 | 2 |
kidney interstitial cell | 1.43e-08 | 2 |
juxtaglomerular complex cell | 1.43e-08 | 2 |
renal interstitial pericyte | 1.43e-08 | 2 |
extraglomerular mesangial cell | 1.43e-08 | 2 |
mesothelial cell | 6.52e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.98e-09 | 31 |
leukemia | 3.52e-08 | 39 |
ovarian cancer | 6.06e-08 | 14 |
chronic leukemia | 6.84e-07 | 8 |