FFCP PHASE1:Hg19::chr2:157199008..157199023,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |||
|TSSclassifier=strong | |||
|UniProt=P43354 | |||
|association_with_transcript=-148bp_to_ENST00000409572_5end | |||
|cluster_id=chr2:157199008..157199023,- | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_3_at_NR4A2_5end | |||
|id=chr2:157199008..157199023,- | |||
|ontology_enrichment_celltype=CL:0002057!3.97e-20!42;CL:0000738!9.21e-20!140;CL:0002031!9.92e-19!124;CL:0000860!5.97e-18!45;CL:0000766!1.88e-16!76;CL:0002087!2.02e-16!119;CL:0000037!2.72e-16!172;CL:0000566!2.72e-16!172;CL:0000988!8.36e-16!182;CL:0002032!1.23e-15!165;CL:0000837!1.23e-15!165;CL:0000557!6.10e-15!71;CL:0000839!3.19e-14!70;CL:0002009!1.14e-12!65;CL:0002194!8.03e-12!63;CL:0000576!8.03e-12!63;CL:0000040!8.03e-12!63;CL:0000559!8.03e-12!63;CL:0000763!3.21e-11!112;CL:0000049!3.21e-11!112;CL:0000791!9.87e-09!18;CL:0000789!9.87e-09!18;CL:0002420!9.87e-09!18;CL:0002419!9.87e-09!18;CL:0000790!9.87e-09!18;CL:0000084!4.62e-07!25;CL:0000827!4.62e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.60e-19;33!CL:0002057;4.60e-19;33!CL:0000473;3.42e-13;39!CL:0000234;3.42e-13;39!CL:0000576;4.80e-12;48!CL:0000766;2.13e-10;69!CL:0000791;9.64e-10;18!CL:0000789;9.64e-10;18!CL:0002419;9.64e-10;18!CL:0000084;8.26e-08;25!CL:0002087;4.29e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.16e-23,136;CL:0000860,1.44e-22,42;CL:0002057,1.44e-22,42;CL:0002031,3.65e-22,120;CL:0000766,6.90e-20,72;CL:0000037,2.66e-19,168;CL:0002087,3.63e-19,115;CL:0000473,3.72e-19,48;CL:0000234,3.72e-19,48;CL:0000988,1.63e-18,177;CL:0002032,2.48e-18,161;CL:0000837,2.48e-18,161;CL:0000557,3.84e-18,67;CL:0000839,2.76e-17,66;CL:0002009,1.77e-15,61;CL:0002194,1.79e-14,59;CL:0000576,1.79e-14,59;CL:0000040,1.79e-14,59;CL:0000559,1.79e-14,59;CL:0000763,1.51e-13,108;CL:0000049,1.51e-13,108;CL:0000791,1.13e-09,18;CL:0000789,1.13e-09,18;CL:0002420,1.13e-09,18;CL:0002419,1.13e-09,18;CL:0000790,1.13e-09,18;CL:0000084,7.89e-08,25;CL:0000827,7.89e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-17;42!CL:0000790;9.64e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-18!102;UBERON:0003061!2.28e-18!102;UBERON:0002193!1.19e-14!112;UBERON:0002371!1.19e-14!80;UBERON:0001474!3.65e-14!86;UBERON:0004765!2.20e-11!101;UBERON:0001434!2.20e-11!101;UBERON:0007023!7.51e-10!115;UBERON:0002405!7.73e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-20,98;UBERON:0003061,1.26e-20,98;UBERON:0002371,1.22e-17,76;UBERON:0001474,1.76e-16,82;UBERON:0002193,2.45e-16,108;UBERON:0004765,1.91e-15,90;UBERON:0001434,3.14e-13,100;UBERON:0002405,2.40e-12,93;UBERON:0007023,3.74e-08,114 | |||
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| |||
|short_description=p3@NR4A2 | |||
}} |
Latest revision as of 16:13, 17 September 2015
Short description: | p3@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR4A2_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | -148bp_to_ENST00000409572_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | P43354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.16e-23 | 136 |
classical monocyte | 1.44e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-22 | 42 |
hematopoietic lineage restricted progenitor cell | 3.65e-22 | 120 |
myeloid leukocyte | 6.90e-20 | 72 |
hematopoietic stem cell | 2.66e-19 | 168 |
nongranular leukocyte | 3.63e-19 | 115 |
defensive cell | 3.72e-19 | 48 |
phagocyte | 3.72e-19 | 48 |
hematopoietic cell | 1.63e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.48e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-18 | 161 |
granulocyte monocyte progenitor cell | 3.84e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.76e-17 | 66 |
macrophage dendritic cell progenitor | 1.77e-15 | 61 |
monopoietic cell | 1.79e-14 | 59 |
monocyte | 1.79e-14 | 59 |
monoblast | 1.79e-14 | 59 |
promonocyte | 1.79e-14 | 59 |
myeloid cell | 1.51e-13 | 108 |
common myeloid progenitor | 1.51e-13 | 108 |
mature alpha-beta T cell | 1.13e-09 | 18 |
alpha-beta T cell | 1.13e-09 | 18 |
immature T cell | 1.13e-09 | 18 |
mature T cell | 1.13e-09 | 18 |
immature alpha-beta T cell | 1.13e-09 | 18 |
T cell | 7.89e-08 | 25 |
pro-T cell | 7.89e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-20 | 98 |
blood island | 1.26e-20 | 98 |
bone marrow | 1.22e-17 | 76 |
bone element | 1.76e-16 | 82 |
hemolymphoid system | 2.45e-16 | 108 |
skeletal element | 1.91e-15 | 90 |
skeletal system | 3.14e-13 | 100 |
immune system | 2.40e-12 | 93 |
adult organism | 3.74e-08 | 114 |