FFCP PHASE1:Hg19::chr5:33892118..33892144,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:33892118..33892144,- to FFCP PHASE1:Hg19::chr5:33892118..33892144,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81792 | |EntrezGene=81792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14605 | |HGNC=14605 | ||
|TSSclassifier=strong | |||
|UniProt=D6REX0,P58397 | |UniProt=D6REX0,P58397 | ||
|association_with_transcript=0bp_to_ENST00000515401,NM_030955,uc003jia.1,uc003jib.1,uc010iuq.1_5end | |||
|cluster_id=chr5:33892118..33892144,- | |||
|coexpression_cluster_id=C1960 | |||
|description=CAGE_peak_2_at_ADAMTS12_5end | |||
|id=chr5:33892118..33892144,- | |||
|ontology_enrichment_celltype=CL:0000055!6.74e-36!180;CL:0000057!4.21e-20!75;CL:0000680!2.27e-18!57;CL:0000056!2.27e-18!57;CL:0000355!2.27e-18!57;CL:0000187!2.39e-18!54;CL:0000183!1.31e-17!59;CL:0000393!2.59e-16!60;CL:0000211!2.59e-16!60;CL:0000192!9.32e-16!42;CL:0000514!9.32e-16!42;CL:0000222!3.60e-12!119;CL:0000359!5.91e-12!32;CL:0000136!4.79e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.27e-12;43!CL:0000359;1.29e-11;32!CL:0000187;2.83e-11;55!CL:0000393;8.86e-10;61!CL:0000211;8.86e-10;61!CL:0000057;3.48e-08;73!CL:0002334;4.97e-08;12!CL:0000723;5.03e-08;61!CL:0000134;1.05e-07;55!CL:0000136;2.22e-07;13!CL:0000048;5.55e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.48e-21,55;CL:0000680,1.71e-19,58;CL:0000056,1.71e-19,58;CL:0000355,1.71e-19,58;CL:0000393,2.03e-18,61;CL:0000211,2.03e-18,61;CL:0000057,7.07e-18,76;CL:0000192,2.89e-17,43;CL:0000514,2.89e-17,43;CL:0000359,2.30e-12,32;CL:0000222,1.03e-11,121;CL:0000048,5.31e-11,427;CL:0000723,3.33e-10,433;CL:0000034,9.14e-10,441;CL:0000136,1.09e-08,15;CL:0002334,5.85e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.27e-12;43!CL:0000355;3.99e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.92e-21!83;UBERON:0002329!7.92e-21!83;UBERON:0003077!7.92e-21!83;UBERON:0003059!7.92e-21!83;UBERON:0007282!7.92e-21!83;UBERON:0009618!7.92e-21!83;UBERON:0007285!7.92e-21!83;UBERON:0004290!1.47e-20!70;UBERON:0002385!9.80e-19!63;UBERON:0001015!9.80e-19!63;UBERON:0000383!9.80e-19!63;UBERON:0001134!1.26e-18!61;UBERON:0002036!1.26e-18!61;UBERON:0003082!1.26e-18!61;UBERON:0005256!4.66e-17!143;UBERON:0000486!9.20e-17!82;UBERON:0002100!1.31e-12!216;UBERON:0000475!7.41e-12!365;UBERON:0000490!5.98e-10!138;UBERON:0004872!5.16e-09!84;UBERON:0002049!8.53e-09!79;UBERON:0007798!8.53e-09!79;UBERON:0000481!1.06e-08!347;UBERON:0000119!7.04e-08!312;UBERON:0003914!1.55e-07!118;UBERON:0000483!2.08e-07!309;UBERON:0003104!2.61e-07!238;UBERON:0009142!2.61e-07!238;UBERON:0004535!2.96e-07!110;UBERON:0002200!3.73e-07!11;UBERON:0006876!3.73e-07!11;UBERON:0001009!4.99e-07!113;UBERON:0001637!6.10e-07!42;UBERON:0003509!6.10e-07!42;UBERON:0004572!6.10e-07!42;UBERON:0004573!9.70e-07!33;UBERON:0004571!9.70e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.42e-08;31!UBERON:0001015;2.42e-08;31!UBERON:0000383;2.42e-08;31!UBERON:0006876;2.82e-08;11!UBERON:0001135;3.17e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.16e-20,71;UBERON:0003059,2.16e-20,71;UBERON:0007282,2.16e-20,71;UBERON:0004290,2.16e-20,71;UBERON:0009618,2.16e-20,71;UBERON:0007524,2.19e-20,73;UBERON:0003077,8.14e-20,72;UBERON:0007285,8.14e-20,72;UBERON:0007503,1.92e-19,78;UBERON:0001134,1.08e-18,62;UBERON:0002036,1.08e-18,62;UBERON:0003082,1.08e-18,62;UBERON:0002385,1.91e-18,64;UBERON:0001015,1.91e-18,64;UBERON:0000383,1.91e-18,64;UBERON:0005256,1.80e-17,122;UBERON:0000486,4.79e-16,83;UBERON:0000490,2.82e-12,148;UBERON:0003104,1.00e-11,160;UBERON:0009142,1.00e-11,160;UBERON:0002100,2.24e-11,199;UBERON:0006876,2.54e-08,11;UBERON:0002049,1.03e-07,78;UBERON:0007798,1.03e-07,78;UBERON:0004535,2.67e-07,109;UBERON:0001135,3.10e-07,15;UBERON:0001637,4.75e-07,42;UBERON:0003509,4.75e-07,42;UBERON:0004572,4.75e-07,42;UBERON:0000119,7.57e-07,309 | |||
|phase1_expression=4.1786027232228,4.06790995392868,5.49722175974288,2.00146596706261,0.446961094427288,1.74467704820074,10.1319951267324,3.15859936713415,4.70134130759709,1.47440361900905,0,2.83973783769224,5.53910654279752,0.990130823680373,0.994192127183747,4.70627602516243,3.01347264011988,3.65155045193687,6.8310591830671,1.96993692922861,1.42800483870977,1.88072832886853,2.0036519099174,2.18999080116615,1.50651167513763,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,5.24236503558474,0,1.00267582127178,1.15877215168659,0,0.486634870302636,3.87592750372678,5.32150553910154,2.45937399940753,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06729878806013,0,0,0,0.24406205754817,0.367663080345869,0,0.982297011124877,0,0.112611480483322,0,0,0,0,0,0,3.47880366186723,7.21793916488105,6.22323149822128,5.73673241497627,4.25602058638028,5.60677600142307,3.20246987189115,4.9333509683432,8.09148692039392,3.50247747381189,1.30769522490767,2.4217188423189,5.76175924479999,2.81185718200556,2.18512053781224,3.4228309292667,1.94283284717341,0.939475989150119,1.29498355494505,2.10676210053373,3.87892925384297,4.17636678860011,1.54988671763648,1.18800285728205,0.741800787835671,1.82032272387605,2.87447256726495,2.52504170931099,3.25308151667107,2.49357703935765,0.438977620880838,0.919463387397059,0.600952235626387,4.53728732640084,0.538168907066586,4.05759038755278,2.96704661623387,0.900273288253207,1.64884046781502,0.772921620136887,0.930584281657949,3.37552664482532,1.26668106709558,0.504867548488229,4.32634523618807,1.93975268182574,1.06502877754984,0.403008392910561,1.01736355386293,0,0.272746120590835,0,0.853815942907168,0.397589304964456,0.929551542956147,1.45125477021519,1.7662459561294,1.82488679537915,1.56449532329816,3.21620469096443,1.38134921352481,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,9.0546282492908,8.82052268313252,0,0,0,0,0,4.97546649865724,0,0,0,0.277765335475589,0.651616610620649,3.11980435583874,5.77325368101093,1.62302566965108,7.0445216541493,0,0,0,0,0,0,0,0,0.93733833986777,0,0.708875486211932,0.626909658919938,0.290633938513962,3.06706143332169,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,1.45770409648969,1.30788020649984,4.8403268641827,12.2808129969889,3.57656445851882,6.762422020448,4.25500986535793,1.04007436911366,1.54324424557285,1.41849132023278,2.66422179016099,12.1531294609425,3.7983512377401,1.64648067356154,4.56030658011229,10.3063665135338,3.16780749173372,5.72734816413214,0.871533458600294,2.49932477955143,0,0,0,0.958499421966331,0,0,0.868687840005475,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,5.61521326133179,1.96271887676878,2.20783381047509,5.50564650465752,1.80567659836631,0,1.03473071292505,3.32112799267718,3.13427586520895,3.5622281931914,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,1.81434175997808,6.69891081110698,5.98501695823444,3.08726103876381,7.94462725385346,4.09365799253363,6.75586468803151,0,6.63101683351419,5.85953693533319,7.47357119725663,3.63478100428535,3.02146983995894,0,0,0,4.36294903025506,2.36718518408732,1.96686622439136,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0,1.29549549661284,1.54227252690289,1.35473218771926,1.50506932156456,0.254876273045038,0,0.895499018888713,0,0,0.512900250232778,2.95213181129735,0.976135183992909,1.03041011647722,0,0,0,0,4.82051789532479,2.12675580242668,2.15668063960502,1.99554777143968,3.44591431211326,5.80069322288678,6.0907011443976,5.02837101754995,4.36256974669013,0,0.192190067365106,0,0,0,3.46293581513704,2.7881490806424,4.31247012246524,2.12922412126809,7.82939692867565,5.00375391580584,2.86249773483982,5.21021717103534,6.01120906965579,8.76898892049594,2.303080121802,2.56763392820352,5.40945521474092,1.56989728039846,7.01502584574927,7.41249980287348,5.89062011728432,5.0545620393329,1.58510321173008,0.842516912477962,2.43816869544795,5.11798328225697,2.11300293513511,1.09199929126389,6.6460553018245,5.65040583101214,2.75682671773062,0.66343897524122,0.876901770507525,1.73632660280006,1.31178950409327,5.88440093191842,3.0982349809975,0,4.7325746227337,7.76167424003657,4.63672366925625,3.90237170477658,0.422215270595328,0.987884678879706,4.55367808518858,4.19921664293979,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0.779160935160341,0,1.26675244876796,0.597743964753209,0,0,0.613612095012929,0.123084805461069,3.11039587661807,10.4247287330899,0,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92375646259493,10.4826691379241,0,0,0,0.31900115973192,2.56473261525214,0,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| 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| ||
|short_description=p2@ADAMTS12 | |||
}} | }} |
Latest revision as of 17:02, 17 September 2015
Short description: | p2@ADAMTS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAMTS12_5end |
Coexpression cluster: | C1960_Mesenchymal_Smooth_cholangiocellular_hepatic_bile_Fibroblast_mesenchymal |
Association with transcript: | 0bp_to_ENST00000515401, NM_030955, uc003jia.1, uc003jib.1, uc010iuq.1_5end |
EntrezGene: | ADAMTS12 |
HGNC: | 14605 |
UniProt: | D6REX0P58397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.48e-21 | 55 |
muscle precursor cell | 1.71e-19 | 58 |
myoblast | 1.71e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-19 | 58 |
electrically responsive cell | 2.03e-18 | 61 |
electrically active cell | 2.03e-18 | 61 |
fibroblast | 7.07e-18 | 76 |
smooth muscle cell | 2.89e-17 | 43 |
smooth muscle myoblast | 2.89e-17 | 43 |
vascular associated smooth muscle cell | 2.30e-12 | 32 |
mesodermal cell | 1.03e-11 | 121 |
multi fate stem cell | 5.31e-11 | 427 |
somatic stem cell | 3.33e-10 | 433 |
stem cell | 9.14e-10 | 441 |
fat cell | 1.09e-08 | 15 |
preadipocyte | 5.85e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
somite | 2.16e-20 | 71 |
presomitic mesoderm | 2.16e-20 | 71 |
presumptive segmental plate | 2.16e-20 | 71 |
dermomyotome | 2.16e-20 | 71 |
trunk paraxial mesoderm | 2.16e-20 | 71 |
dense mesenchyme tissue | 2.19e-20 | 73 |
paraxial mesoderm | 8.14e-20 | 72 |
presumptive paraxial mesoderm | 8.14e-20 | 72 |
epithelial vesicle | 1.92e-19 | 78 |
skeletal muscle tissue | 1.08e-18 | 62 |
striated muscle tissue | 1.08e-18 | 62 |
myotome | 1.08e-18 | 62 |
muscle tissue | 1.91e-18 | 64 |
musculature | 1.91e-18 | 64 |
musculature of body | 1.91e-18 | 64 |
trunk mesenchyme | 1.80e-17 | 122 |
multilaminar epithelium | 4.79e-16 | 83 |
unilaminar epithelium | 2.82e-12 | 148 |
mesenchyme | 1.00e-11 | 160 |
entire embryonic mesenchyme | 1.00e-11 | 160 |
trunk | 2.24e-11 | 199 |
vasculature of organ | 2.54e-08 | 11 |
vasculature | 1.03e-07 | 78 |
vascular system | 1.03e-07 | 78 |
cardiovascular system | 2.67e-07 | 109 |
smooth muscle tissue | 3.10e-07 | 15 |
artery | 4.75e-07 | 42 |
arterial blood vessel | 4.75e-07 | 42 |
arterial system | 4.75e-07 | 42 |
cell layer | 7.57e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.54e-07 | 14 |