FFCP PHASE1:Hg19::chr8:26434602..26434641,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:26434602..26434641,+ to FFCP PHASE1:Hg19::chr8:26434602..26434641,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1808 | |EntrezGene=1808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3014 | |HGNC=3014 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFU4 | |UniProt=E5RFU4 | ||
|association_with_transcript=24bp_to_ENST00000493789_5end | |||
|cluster_id=chr8:26434602..26434641,+ | |||
|description=CAGE_peak_13_at_DPYSL2_5end | |||
|id=chr8:26434602..26434641,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.65e-16!65;CL:0000557!2.09e-16!71;CL:0002194!2.41e-15!63;CL:0000576!2.41e-15!63;CL:0000040!2.41e-15!63;CL:0000559!2.41e-15!63;CL:0000034!5.47e-14!444;CL:0000048!6.61e-14!430;CL:0000839!1.51e-13!70;CL:0000860!2.03e-13!45;CL:0002057!4.32e-13!42;CL:0000723!5.24e-13!436;CL:0000766!7.23e-12!76;CL:0000219!2.01e-10!390;CL:0000763!1.07e-09!112;CL:0000049!1.07e-09!112;CL:0000144!1.26e-09!625;CL:0000134!1.30e-09!358;CL:0002320!2.30e-09!365;CL:0002371!6.20e-09!591;CL:0000548!3.17e-08!679;CL:0000004!3.17e-08!679;CL:0000255!3.17e-08!679;CL:0000012!4.09e-08!682;CL:0000451!4.53e-07!10;CL:0000988!6.84e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.99e-15;33!CL:0002057;3.99e-15;33!CL:0000473;9.47e-13;39!CL:0000234;9.47e-13;39!CL:0000451;6.51e-09;10!CL:0000576;8.91e-09;48!CL:0000990;7.58e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.48e-18,67;CL:0002009,3.28e-18,61;CL:0002194,1.47e-16,59;CL:0000576,1.47e-16,59;CL:0000040,1.47e-16,59;CL:0000559,1.47e-16,59;CL:0000839,1.43e-15,66;CL:0000473,2.56e-15,48;CL:0000234,2.56e-15,48;CL:0000860,4.64e-15,42;CL:0002057,4.64e-15,42;CL:0000766,3.77e-14,72;CL:0000034,5.77e-14,441;CL:0000048,1.26e-13,427;CL:0000723,3.30e-13,433;CL:0000763,7.79e-12,108;CL:0000049,7.79e-12,108;CL:0000219,1.06e-10,386;CL:0000134,3.12e-10,354;CL:0002320,4.11e-10,361;CL:0000988,1.39e-09,177;CL:0000451,4.67e-09,10;CL:0000738,8.04e-09,136;CL:0002031,4.27e-08,120;CL:0000037,1.38e-07,168;CL:0000990,5.25e-07,8;CL:0000840,9.46e-07,5;CL:0001029,9.46e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.17e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.19e-16!86;UBERON:0002371!3.68e-16!80;UBERON:0002193!3.15e-15!112;UBERON:0002390!2.05e-14!102;UBERON:0003061!2.05e-14!102;UBERON:0003081!4.28e-13!216;UBERON:0004765!8.40e-13!101;UBERON:0001434!8.40e-13!101;UBERON:0002405!9.56e-13!115;UBERON:0002204!1.09e-10!167;UBERON:0002384!3.59e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.64e-17,82;UBERON:0002371,4.86e-17,76;UBERON:0004765,5.32e-15,90;UBERON:0002390,3.46e-14,98;UBERON:0003061,3.46e-14,98;UBERON:0002405,1.95e-13,93;UBERON:0001434,2.47e-13,100;UBERON:0002193,4.83e-13,108;UBERON:0003081,5.79e-12,203;UBERON:0002384,7.46e-11,371;UBERON:0002204,5.02e-10,167;UBERON:0000926,2.47e-09,315;UBERON:0004120,2.47e-09,315;UBERON:0006603,2.47e-09,315 | |||
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|short_description=p13@DPYSL2 | |||
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Latest revision as of 17:32, 17 September 2015
Short description: | p13@DPYSL2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DPYSL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000493789_5end |
EntrezGene: | DPYSL2 |
HGNC: | 3014 |
UniProt: | E5RFU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.48e-18 | 67 |
macrophage dendritic cell progenitor | 3.28e-18 | 61 |
monopoietic cell | 1.47e-16 | 59 |
monocyte | 1.47e-16 | 59 |
monoblast | 1.47e-16 | 59 |
promonocyte | 1.47e-16 | 59 |
myeloid lineage restricted progenitor cell | 1.43e-15 | 66 |
defensive cell | 2.56e-15 | 48 |
phagocyte | 2.56e-15 | 48 |
classical monocyte | 4.64e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-15 | 42 |
myeloid leukocyte | 3.77e-14 | 72 |
stem cell | 5.77e-14 | 441 |
multi fate stem cell | 1.26e-13 | 427 |
somatic stem cell | 3.30e-13 | 433 |
myeloid cell | 7.79e-12 | 108 |
common myeloid progenitor | 7.79e-12 | 108 |
motile cell | 1.06e-10 | 386 |
mesenchymal cell | 3.12e-10 | 354 |
connective tissue cell | 4.11e-10 | 361 |
hematopoietic cell | 1.39e-09 | 177 |
dendritic cell | 4.67e-09 | 10 |
leukocyte | 8.04e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.27e-08 | 120 |
hematopoietic stem cell | 1.38e-07 | 168 |
conventional dendritic cell | 5.25e-07 | 8 |
immature conventional dendritic cell | 9.46e-07 | 5 |
common dendritic progenitor | 9.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.64e-17 | 82 |
bone marrow | 4.86e-17 | 76 |
skeletal element | 5.32e-15 | 90 |
hematopoietic system | 3.46e-14 | 98 |
blood island | 3.46e-14 | 98 |
immune system | 1.95e-13 | 93 |
skeletal system | 2.47e-13 | 100 |
hemolymphoid system | 4.83e-13 | 108 |
lateral plate mesoderm | 5.79e-12 | 203 |
connective tissue | 7.46e-11 | 371 |
musculoskeletal system | 5.02e-10 | 167 |
mesoderm | 2.47e-09 | 315 |
mesoderm-derived structure | 2.47e-09 | 315 |
presumptive mesoderm | 2.47e-09 | 315 |