FFCP PHASE1:Hg19::chr19:3772263..3772274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84839 | |EntrezGene=84839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18286 | |HGNC=18286 | ||
|TSSclassifier=strong | |||
|UniProt=G3V243 | |UniProt=G3V243 | ||
|association_with_transcript=-30bp_to_ENST00000555633_5end | |association_with_transcript=-30bp_to_ENST00000555633_5end | ||
|cluster_id=chr19:3772263..3772274,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_2_at_RAX2_5end | |description=CAGE_peak_2_at_RAX2_5end | ||
|id=chr19:3772263..3772274,- | |id=chr19:3772263..3772274,- | ||
|ontology_enrichment_celltype=CL:0000306!1.92e-07!4;CL:0002222!1.92e-07!4;CL:0002224!1.92e-07!4 | |ontology_enrichment_celltype=CL:0000306!1.92e-07!4;CL:0002222!1.92e-07!4;CL:0002224!1.92e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.25e-45;3 | |||
|ontology_enrichment_disease=DOID:5409!1.80e-07!4 | |ontology_enrichment_disease=DOID:5409!1.80e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.70e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.00e-50!2;UBERON:0002757!4.00e-50!2;UBERON:0010134!4.00e-50!2;UBERON:0002784!4.00e-50!2;UBERON:0005408!4.00e-50!2;UBERON:0001899!4.00e-50!2;UBERON:0003296!1.11e-25!4;UBERON:0010133!1.11e-25!4;UBERON:0000966!5.44e-21!5;UBERON:0005388!5.44e-21!5;UBERON:0001802!5.44e-21!5;UBERON:0000970!2.42e-20!20;UBERON:0002104!2.11e-19!21;UBERON:0000020!9.21e-18!23;UBERON:0001032!4.81e-17!24;UBERON:0004456!4.81e-17!24;UBERON:0001894!3.79e-15!7;UBERON:0006222!3.79e-15!7;UBERON:0002360!1.55e-13!2;UBERON:0000094!1.55e-13!2;UBERON:0007645!1.55e-13!2;UBERON:0000019!1.77e-12!19;UBERON:0000047!1.77e-12!19;UBERON:0004088!1.77e-12!19;UBERON:0003072!1.77e-12!19;UBERON:0003071!1.77e-12!19;UBERON:0004128!1.77e-12!19;UBERON:0001456!2.34e-11!21;UBERON:0003075!2.36e-10!86;UBERON:0007284!2.36e-10!86;UBERON:0003056!2.89e-10!61;UBERON:0002346!6.68e-10!90;UBERON:0005085!2.10e-08!29;UBERON:0010077!1.92e-07!4;UBERON:0005389!1.92e-07!4;UBERON:0000484!1.92e-07!4;UBERON:0002546!1.92e-07!4;UBERON:0000965!1.92e-07!4;UBERON:0001803!1.92e-07!4;UBERON:0003073!1.92e-07!4;UBERON:0005426!1.92e-07!4;UBERON:0005743!2.81e-07!86 | |ontology_enrichment_uberon=UBERON:0001905!4.00e-50!2;UBERON:0002757!4.00e-50!2;UBERON:0010134!4.00e-50!2;UBERON:0002784!4.00e-50!2;UBERON:0005408!4.00e-50!2;UBERON:0001899!4.00e-50!2;UBERON:0003296!1.11e-25!4;UBERON:0010133!1.11e-25!4;UBERON:0000966!5.44e-21!5;UBERON:0005388!5.44e-21!5;UBERON:0001802!5.44e-21!5;UBERON:0000970!2.42e-20!20;UBERON:0002104!2.11e-19!21;UBERON:0000020!9.21e-18!23;UBERON:0001032!4.81e-17!24;UBERON:0004456!4.81e-17!24;UBERON:0001894!3.79e-15!7;UBERON:0006222!3.79e-15!7;UBERON:0002360!1.55e-13!2;UBERON:0000094!1.55e-13!2;UBERON:0007645!1.55e-13!2;UBERON:0000019!1.77e-12!19;UBERON:0000047!1.77e-12!19;UBERON:0004088!1.77e-12!19;UBERON:0003072!1.77e-12!19;UBERON:0003071!1.77e-12!19;UBERON:0004128!1.77e-12!19;UBERON:0001456!2.34e-11!21;UBERON:0003075!2.36e-10!86;UBERON:0007284!2.36e-10!86;UBERON:0003056!2.89e-10!61;UBERON:0002346!6.68e-10!90;UBERON:0005085!2.10e-08!29;UBERON:0010077!1.92e-07!4;UBERON:0005389!1.92e-07!4;UBERON:0000484!1.92e-07!4;UBERON:0002546!1.92e-07!4;UBERON:0000965!1.92e-07!4;UBERON:0001803!1.92e-07!4;UBERON:0003073!1.92e-07!4;UBERON:0005426!1.92e-07!4;UBERON:0005743!2.81e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.53e-66;2!UBERON:0002757;5.53e-66;2!UBERON:0010134;5.53e-66;2!UBERON:0005408;5.53e-66;2!UBERON:0001899;5.53e-66;2!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0002784;1.17e-33;4!UBERON:0000966;1.82e-27;5!UBERON:0005388;1.82e-27;5!UBERON:0001802;1.82e-27;5!UBERON:0001894;9.49e-20;7!UBERON:0000970;1.06e-15;20!UBERON:0002104;5.40e-15;21!UBERON:0000020;9.23e-14;23!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0000019;5.35e-08;19!UBERON:0000047;5.35e-08;19!UBERON:0004088;5.35e-08;19!UBERON:0010230;5.35e-08;19!UBERON:0001456;2.52e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.53e-66,2;UBERON:0002757,5.53e-66,2;UBERON:0010134,5.53e-66,2;UBERON:0005408,5.53e-66,2;UBERON:0001899,5.53e-66,2;UBERON:0003296,1.17e-33,4;UBERON:0010133,1.17e-33,4;UBERON:0002784,1.17e-33,4;UBERON:0000966,4.34e-23,6;UBERON:0005388,4.34e-23,6;UBERON:0001802,4.34e-23,6;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0000970,5.40e-15,21;UBERON:0002104,5.40e-15,21;UBERON:0000020,3.20e-13,24;UBERON:0001032,3.20e-13,24;UBERON:0004456,3.20e-13,24;UBERON:0003056,4.24e-09,61;UBERON:0000019,1.21e-07,20;UBERON:0000047,1.21e-07,20;UBERON:0010312,1.21e-07,20;UBERON:0004088,1.21e-07,20;UBERON:0010230,1.21e-07,20;UBERON:0003072,1.21e-07,20;UBERON:0004128,1.21e-07,20;UBERON:0003071,1.21e-07,20;UBERON:0001456,4.94e-07,22;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82 | |||
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|short_description=p2@RAX2 | |short_description=p2@RAX2 | ||
}} | }} |
Latest revision as of 17:47, 17 September 2015
Short description: | p2@RAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAX2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -30bp_to_ENST00000555633_5end |
EntrezGene: | RAX2 |
HGNC: | 18286 |
UniProt: | G3V243 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.53e-66 | 2 |
regional part of epithalamus | 5.53e-66 | 2 |
secretory circumventricular organ | 5.53e-66 | 2 |
circumventricular organ | 5.53e-66 | 2 |
epithalamus | 5.53e-66 | 2 |
gland of diencephalon | 1.17e-33 | 4 |
neuroendocrine gland | 1.17e-33 | 4 |
regional part of diencephalon | 1.17e-33 | 4 |
retina | 4.34e-23 | 6 |
photoreceptor array | 4.34e-23 | 6 |
posterior segment of eyeball | 4.34e-23 | 6 |
diencephalon | 9.49e-20 | 7 |
future diencephalon | 9.49e-20 | 7 |
eye | 5.40e-15 | 21 |
visual system | 5.40e-15 | 21 |
sense organ | 3.20e-13 | 24 |
sensory system | 3.20e-13 | 24 |
entire sense organ system | 3.20e-13 | 24 |
pre-chordal neural plate | 4.24e-09 | 61 |
camera-type eye | 1.21e-07 | 20 |
simple eye | 1.21e-07 | 20 |
immature eye | 1.21e-07 | 20 |
ocular region | 1.21e-07 | 20 |
eyeball of camera-type eye | 1.21e-07 | 20 |
optic cup | 1.21e-07 | 20 |
optic vesicle | 1.21e-07 | 20 |
eye primordium | 1.21e-07 | 20 |
face | 4.94e-07 | 22 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-09 | 4 |