FFCP PHASE1:Hg19::chr4:40058812..40058825,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:40058812..40058825,-
|short_description=p2@LOC344967
|description=CAGE_peak_2_at_LOC344967_5end
|association_with_transcript=0bp_to_ENST00000381811,NR_0272...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344967 | |EntrezGene=344967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | |||
|cluster_id=chr4:40058812..40058825,- | |||
|description=CAGE_peak_2_at_LOC344967_5end | |||
|id=chr4:40058812..40058825,- | |||
|ontology_enrichment_celltype=CL:0000860!7.17e-23!45;CL:0002057!4.62e-22!42;CL:0000557!5.36e-22!71;CL:0000766!6.41e-22!76;CL:0000839!1.01e-20!70;CL:0002009!7.84e-19!65;CL:0002194!9.19e-19!63;CL:0000576!9.19e-19!63;CL:0000040!9.19e-19!63;CL:0000559!9.19e-19!63;CL:0000763!2.99e-15!112;CL:0000049!2.99e-15!112;CL:0002371!7.12e-13!591;CL:0000144!5.33e-10!625;CL:0000048!3.33e-09!430;CL:0000723!9.48e-09!436;CL:0000034!2.62e-08!444;CL:0000012!1.97e-07!682;CL:0002393!3.61e-07!9;CL:0002397!3.61e-07!9;CL:0000548!4.60e-07!679;CL:0000004!4.60e-07!679;CL:0000255!4.60e-07!679;CL:0000738!8.31e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.23e-23;48!CL:0000860;8.70e-22;33!CL:0002057;8.70e-22;33!CL:0000766;7.96e-16;69!CL:0000473;1.08e-15;39!CL:0000234;1.08e-15;39!CL:0002393;4.09e-09;6!CL:0002397;4.09e-09;6!CL:0000763;9.95e-09;100!CL:0000097;1.28e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.44e-34,72;CL:0000860,3.87e-34,42;CL:0002057,3.87e-34,42;CL:0000557,5.38e-32,67;CL:0000473,4.63e-30,48;CL:0000234,4.63e-30,48;CL:0000839,1.00e-29,66;CL:0002009,4.77e-26,61;CL:0002194,6.86e-26,59;CL:0000576,6.86e-26,59;CL:0000040,6.86e-26,59;CL:0000559,6.86e-26,59;CL:0000763,9.16e-24,108;CL:0000049,9.16e-24,108;CL:0000738,5.86e-14,136;CL:0002393,5.98e-13,9;CL:0002397,5.98e-13,9;CL:0000037,4.27e-12,168;CL:0002031,1.77e-11,120;CL:0000988,2.85e-11,177;CL:0002032,4.22e-11,161;CL:0000837,4.22e-11,161;CL:0002087,1.47e-09,115;CL:0000048,1.56e-07,427;CL:0000097,1.60e-07,5;CL:0002028,1.60e-07,5;CL:0000034,2.75e-07,441;CL:0000723,4.32e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-24;42!CL:0000049;2.66e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.51e-20!80;UBERON:0001474!4.35e-19!86;UBERON:0004765!1.62e-16!101;UBERON:0001434!1.62e-16!101;UBERON:0002204!2.12e-16!167;UBERON:0003081!8.46e-16!216;UBERON:0002193!9.68e-15!112;UBERON:0002390!1.01e-14!102;UBERON:0003061!1.01e-14!102;UBERON:0002405!1.56e-13!115;UBERON:0000926!1.02e-07!448;UBERON:0004120!1.02e-07!448;UBERON:0006603!1.02e-07!448;UBERON:0000468!3.33e-07!659;UBERON:0000467!6.71e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.58e-28,76;UBERON:0001474,4.36e-26,82;UBERON:0004765,1.64e-23,90;UBERON:0002405,2.83e-22,93;UBERON:0003081,1.40e-21,203;UBERON:0002390,1.63e-21,98;UBERON:0003061,1.63e-21,98;UBERON:0001434,2.60e-21,100;UBERON:0002193,4.14e-20,108;UBERON:0002204,1.10e-17,167;UBERON:0000926,1.96e-11,315;UBERON:0004120,1.96e-11,315;UBERON:0006603,1.96e-11,315 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,1.56711376919903,0.491467873003018,0.697801167972428,0.218441372130172,0.791300934685361,0.123766352960047,1.65698687863958,0.672325146451775,0,0,0.487932798790507,0.369363174230364,1.83600622119828,1.88072832886853,0.85870796139317,1.50561867580173,1.25542639594803,0.382067028739756,0.164201178899891,0.314843125254717,8.65401409067589,1.91914699048606,9.75341576891279,3.67768489791571,3.614471025339,1.47901604066715,0,0,3.52320527201817,12.7418943962332,7.82123345133553,24.3052175201754,2.68698569087909,0.971680998056939,2.31818010870768,1.16318591023652,1.51150377475524,1.4555043671269,1.39457422143411,1.23350366406548,1.54853185447552,4.60307827715441,2.81776777182011,3.31075121844019,2.06847408441971,0.645484683583826,4.06279459783025,0.941211697713023,1.09162460023138,0.674170453335254,3.67300670845083,0.641858054152187,3.83602275479425,5.93732340336089,2.59302754908121,2.98357325372886,3.19230162491442,2.26954089876456,3.11411124497787,4.77372463987812,2.08593167368081,5.2125322729228,4.23779651843358,1.10483290796269,0.949387162322653,2.32380814943136,1.70083439972035,10.9022495664355,0.673971786878971,2.10247649978109,3.53596290733576,3.70516566863623,2.18808344918999,3.83594722905731,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0,2.64342657158052,0,1.58030450865046,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0,0,0,0.267440195783507,0.289648807765598,2.43806866313962,2.01210257911091,0,0,0,0.724232594804119,0,1.94653948121054,0.661743720148475,1.10864698731282,0.351339142772504,0.261958150995425,0.364295288292542,0.741568885568859,0.324547393654683,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0.993812036833525,1.72046919021225,0.694281003215189,0.56530794192401,2.51699661725944,0.550236083880135,1.25396979922086,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,1.46437234528902,0,0.81014194788176,0.625098097988558,2.02076435363553,0.450445921933289,9.19899824795299,0.949265659568129,0.549605231791222,0,3.87780264148325,0.872188104285069,0,0.506522046658319,0.529636723252875,1.72101972449288,0.354668382198357,1.68203280042692,0,0.74000264525148,0,1.21239604862719,1.30769522490767,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,0.587172493218824,0.485618833104395,0.702254033511242,0,0.245668634623536,1.13658359293342,0,0.741800787835671,0,2.15585442544872,0.505008341862199,1.00094815897571,0.277064115484183,0.438977620880838,0.30648779579902,1.05166641234618,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,1.54584324027377,0.558350568994769,0.675105328965065,0,1.51460264546469,0.828449087780694,0.969876340912871,1.06502877754984,0.201504196455281,0.339121184620975,0.57978255948989,1.09098448236334,0.286804595389004,0.243947412259191,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.85747171212792,0,1.0647612003586,0.168584690078102,0.241011029883482,0.220587945464788,0,0.71181185733329,0.943819157121151,0,1.92373578473195,2.21446636387394,0,0.4115740113314,2.94017422771084,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0.329250856225877,0,0.603173834469785,0.370353780634118,0.325808305310325,0,0,0.34779121492523,0,0.721832238805369,1.85194205030644,0.380508304469197,3.95102198979638,2.57545848628462,0.738651018262192,0.234004265139238,1.78357394746474,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0.766765358330422,2.95597942737566,1.14462964217194,7.46381215946779,6.3412779503463,9.34194007355212,0.253991577168676,0.381988425558278,3.51652341630141,0,1.13110241973656,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0,21.4593867511129,1.690605505112,1.06375246633948,0,0.771622122786426,0,0.799266537048298,0.428933980974443,1.08524321078289,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0.434343920002738,1.02738161275192,0.716243852959582,0.112085143993527,0.591092280605782,0,2.18183161675572,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,2.99161459204025,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.819989904948992,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.737476674166813,0.260650843404249,0.979005787313703,0,0.413536052245775,6.25571182373989,3.09509917629989,1.21251028578504,1.66435439510497,0.604780586659361,0.248107807818777,0.306923946576125,0.841980283299221,0.128139149255701,0.511707249066704,0.64341568457443,1.48418066444991,0.462629081407967,0,0,0.519254429183621,0.116210378459959,0,0,0.552485933615378,0.34444334449382,0.182091168006717,0.2622488299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|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,1.56711376919903,0.491467873003018,0.697801167972428,0.218441372130172,0.791300934685361,0.123766352960047,1.65698687863958,0.672325146451775,0,0,0.487932798790507,0.369363174230364,1.83600622119828,1.88072832886853,0.85870796139317,1.50561867580173,1.25542639594803,0.382067028739756,0.164201178899891,0.314843125254717,8.65401409067589,1.91914699048606,9.75341576891279,3.67768489791571,3.614471025339,1.47901604066715,0,0,3.52320527201817,12.7418943962332,7.82123345133553,24.3052175201754,2.68698569087909,0.971680998056939,2.31818010870768,1.16318591023652,1.51150377475524,1.4555043671269,1.39457422143411,1.23350366406548,1.54853185447552,4.60307827715441,2.81776777182011,3.31075121844019,2.06847408441971,0.645484683583826,4.06279459783025,0.941211697713023,1.09162460023138,0.674170453335254,3.67300670845083,0.641858054152187,3.83602275479425,5.93732340336089,2.59302754908121,2.98357325372886,3.19230162491442,2.26954089876456,3.11411124497787,4.77372463987812,2.08593167368081,5.2125322729228,4.23779651843358,1.10483290796269,0.949387162322653,2.32380814943136,1.70083439972035,10.9022495664355,0.673971786878971,2.10247649978109,3.53596290733576,3.70516566863623,2.18808344918999,3.83594722905731,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0,2.64342657158052,0,1.58030450865046,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0,0,0,0.267440195783507,0.289648807765598,2.43806866313962,2.01210257911091,0,0,0,0.724232594804119,0,1.94653948121054,0.661743720148475,1.10864698731282,0.351339142772504,0.261958150995425,0.364295288292542,0.741568885568859,0.324547393654683,0.174129737299267,0.797747763113191,0.238490624305342,0,0,0.993812036833525,1.72046919021225,0.694281003215189,0.56530794192401,2.51699661725944,0.550236083880135,1.25396979922086,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,1.52054421143703,1.46437234528902,0,0.81014194788176,0.625098097988558,2.02076435363553,0.450445921933289,9.19899824795299,0.949265659568129,0.549605231791222,0,3.87780264148325,0.872188104285069,0,0.506522046658319,0.529636723252875,1.72101972449288,0.354668382198357,1.68203280042692,0,0.74000264525148,0,1.21239604862719,1.30769522490767,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,0.587172493218824,0.485618833104395,0.702254033511242,0,0.245668634623536,1.13658359293342,0,0.741800787835671,0,2.15585442544872,0.505008341862199,1.00094815897571,0.277064115484183,0.438977620880838,0.30648779579902,1.05166641234618,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,1.54584324027377,0.558350568994769,0.675105328965065,0,1.51460264546469,0.828449087780694,0.969876340912871,1.06502877754984,0.201504196455281,0.339121184620975,0.57978255948989,1.09098448236334,0.286804595389004,0.243947412259191,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.85747171212792,0,1.0647612003586,0.168584690078102,0.241011029883482,0.220587945464788,0,0.71181185733329,0.943819157121151,0,1.92373578473195,2.21446636387394,0,0.4115740113314,2.94017422771084,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0.329250856225877,0,0.603173834469785,0.370353780634118,0.325808305310325,0,0,0.34779121492523,0,0.721832238805369,1.85194205030644,0.380508304469197,3.95102198979638,2.57545848628462,0.738651018262192,0.234004265139238,1.78357394746474,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0.766765358330422,2.95597942737566,1.14462964217194,7.46381215946779,6.3412779503463,9.34194007355212,0.253991577168676,0.381988425558278,3.51652341630141,0,1.13110241973656,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0,21.4593867511129,1.690605505112,1.06375246633948,0,0.771622122786426,0,0.799266537048298,0.428933980974443,1.08524321078289,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0.434343920002738,1.02738161275192,0.716243852959582,0.112085143993527,0.591092280605782,0,2.18183161675572,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,2.99161459204025,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.819989904948992,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.737476674166813,0.260650843404249,0.979005787313703,0,0.413536052245775,6.25571182373989,3.09509917629989,1.21251028578504,1.66435439510497,0.604780586659361,0.248107807818777,0.306923946576125,0.841980283299221,0.128139149255701,0.511707249066704,0.64341568457443,1.48418066444991,0.462629081407967,0,0,0.519254429183621,0.116210378459959,0,0,0.552485933615378,0.34444334449382,0.182091168006717,0.2622488299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| ||
|short_description=p2@LOC344967 | |||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p2@LOC344967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC344967_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381811, NR_027277, uc011byr.1_5end |
EntrezGene: | LOC344967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.44e-34 | 72 |
classical monocyte | 3.87e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-34 | 42 |
granulocyte monocyte progenitor cell | 5.38e-32 | 67 |
defensive cell | 4.63e-30 | 48 |
phagocyte | 4.63e-30 | 48 |
myeloid lineage restricted progenitor cell | 1.00e-29 | 66 |
macrophage dendritic cell progenitor | 4.77e-26 | 61 |
monopoietic cell | 6.86e-26 | 59 |
monocyte | 6.86e-26 | 59 |
monoblast | 6.86e-26 | 59 |
promonocyte | 6.86e-26 | 59 |
myeloid cell | 9.16e-24 | 108 |
common myeloid progenitor | 9.16e-24 | 108 |
leukocyte | 5.86e-14 | 136 |
intermediate monocyte | 5.98e-13 | 9 |
CD14-positive, CD16-positive monocyte | 5.98e-13 | 9 |
hematopoietic stem cell | 4.27e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.77e-11 | 120 |
hematopoietic cell | 2.85e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.22e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-11 | 161 |
nongranular leukocyte | 1.47e-09 | 115 |
multi fate stem cell | 1.56e-07 | 427 |
mast cell | 1.60e-07 | 5 |
basophil mast progenitor cell | 1.60e-07 | 5 |
stem cell | 2.75e-07 | 441 |
somatic stem cell | 4.32e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.58e-28 | 76 |
bone element | 4.36e-26 | 82 |
skeletal element | 1.64e-23 | 90 |
immune system | 2.83e-22 | 93 |
lateral plate mesoderm | 1.40e-21 | 203 |
hematopoietic system | 1.63e-21 | 98 |
blood island | 1.63e-21 | 98 |
skeletal system | 2.60e-21 | 100 |
hemolymphoid system | 4.14e-20 | 108 |
musculoskeletal system | 1.10e-17 | 167 |
mesoderm | 1.96e-11 | 315 |
mesoderm-derived structure | 1.96e-11 | 315 |
presumptive mesoderm | 1.96e-11 | 315 |