FFCP PHASE1:Hg19::chr6:30689350..30689366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203068 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20778 | |||
|TSSclassifier=strong | |||
|UniProt=Q5ST81 | |||
|association_with_transcript=0bp_to_ENST00000330914_5end | |||
|cluster_id=chr6:30689350..30689366,+ | |||
|description=CAGE_peak_9_at_TUBB_5end | |||
|id=chr6:30689350..30689366,+ | |||
|ontology_enrichment_celltype=CL:0000548!8.69e-14!679;CL:0000004!8.69e-14!679;CL:0000255!8.69e-14!679;CL:0000012!1.83e-13!682;CL:0002321!6.23e-11!248;CL:0000220!9.64e-11!246;CL:0000144!2.48e-09!625;CL:0000003!1.47e-07!722;CL:0002371!5.93e-07!591;CL:0000066!7.02e-07!254;CL:0000222!9.55e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-11;33!CL:0002057;5.06e-11;33!CL:0000359;8.78e-09;32!CL:1000746;9.47e-08;7!CL:1000612;9.47e-08;7!CL:0000473;2.05e-07;39!CL:0000234;2.05e-07;39!CL:0002594;2.62e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.43e-09,32;CL:0000860,1.36e-08,42;CL:0002057,1.36e-08,42;CL:0002594,1.45e-07,4;CL:0002321,2.64e-07,250;CL:1000746,3.47e-07,7;CL:1000612,3.47e-07,7;CL:0000192,4.85e-07,43;CL:0000514,4.85e-07,43;CL:0000473,6.50e-07,48;CL:0000234,6.50e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.52e-08!42;UBERON:0003509!2.52e-08!42;UBERON:0004572!2.52e-08!42;UBERON:0002049!3.31e-08!79;UBERON:0007798!3.31e-08!79;UBERON:0000922!6.99e-08!612;UBERON:0002050!1.23e-07!605;UBERON:0005423!1.23e-07!605;UBERON:0001981!1.48e-07!60;UBERON:0007500!1.48e-07!60;UBERON:0004537!1.48e-07!60;UBERON:0006965!1.48e-07!60;UBERON:0000923!1.87e-07!604;UBERON:0005291!1.87e-07!604;UBERON:0006598!1.87e-07!604;UBERON:0002532!1.87e-07!604;UBERON:0003914!2.45e-07!118;UBERON:0000468!5.69e-07!659;UBERON:0000926!6.30e-07!448;UBERON:0004120!6.30e-07!448;UBERON:0006603!6.30e-07!448;UBERON:0000055!9.69e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.16e-12;9!UBERON:0001557;2.16e-12;9!UBERON:0001637;4.68e-08;42!UBERON:0003509;4.68e-08;42!UBERON:0004572;4.68e-08;42!UBERON:0000074;9.47e-08;7!UBERON:0001229;9.47e-08;7!UBERON:0001310;2.62e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.79e-14,203;UBERON:0001737,4.23e-13,9;UBERON:0001637,2.77e-11,42;UBERON:0003509,2.77e-11,42;UBERON:0004572,2.77e-11,42;UBERON:0003914,4.05e-10,117;UBERON:0005423,5.30e-10,581;UBERON:0007500,6.48e-10,59;UBERON:0001981,6.48e-10,59;UBERON:0004537,6.48e-10,59;UBERON:0006965,6.48e-10,59;UBERON:0000922,2.89e-09,592;UBERON:0002050,4.34e-09,564;UBERON:0000923,6.93e-09,560;UBERON:0010316,6.93e-09,560;UBERON:0005291,6.93e-09,560;UBERON:0006598,6.93e-09,560;UBERON:0010317,6.93e-09,560;UBERON:0002532,6.93e-09,560;UBERON:0004872,7.05e-09,83;UBERON:0002049,1.10e-08,78;UBERON:0007798,1.10e-08,78;UBERON:0000926,1.55e-08,315;UBERON:0004120,1.55e-08,315;UBERON:0006603,1.55e-08,315;UBERON:0000055,1.88e-08,68;UBERON:0001310,1.45e-07,4;UBERON:0007503,2.38e-07,78;UBERON:0010532,3.47e-07,7;UBERON:0000074,3.47e-07,7;UBERON:0001229,3.47e-07,7;UBERON:0001230,3.47e-07,7;UBERON:0003220,3.47e-07,7;UBERON:0005749,3.47e-07,7;UBERON:0004199,3.47e-07,7;UBERON:0004209,3.47e-07,7;UBERON:0004198,3.47e-07,7;UBERON:0004535,3.73e-07,109;UBERON:0001009,9.54e-07,112 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.982935746006035,2.09340350391728,0.655324116390517,1.31883489114227,0,0.331397375727916,0,1.80808358407193,0,3.41552959153355,0.369363174230364,1.22400414746552,0.313454721478088,0,0.958120975510189,0.627713197974014,0.229240217243854,0.410502947249729,0.708397031823113,0,0,0.619264493264304,3.67768489791571,1.50602959389125,1.10926203050036,0.232401601740905,0,0,0,0,0.868043482863407,0,0,0,0.872389432677388,2.26725566213286,0.485168122375632,0.232429036905685,0.822335776043652,1.54853185447552,2.01384674625505,1.7931249457037,0.709446689665756,3.7922024881028,2.5819387343353,1.35426486594342,0.941211697713023,1.09162460023138,0.898893937780338,1.53041946185451,1.60464513538047,2.55734850319616,0,0.398927315243264,0.426224750532694,2.90209238628584,6.80862269629368,3.11411124497787,2.26123798731069,0.521482918420201,0.434377689410233,1.81619850790011,2.20966581592539,4.1140110367315,0,0,0,0.22465726229299,0,0,0,0,0.182664153764634,1.75996244461323,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0.767175371061182,0.722878304769133,0,0.579386075843295,0,0,0.567208902984407,1.10864698731282,0.790513071238134,0.458426764241994,0.728590576585084,0.741568885568859,0,0.348259474598534,0.132957960518865,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,1.10047216776027,1.04497483268405,1.03366703667732,0,0.66944122552934,0.805658634218294,0,0.732186172644509,1.10298924103761,0.81014194788176,0.17859945656816,0.22452937262617,0.563057402416611,0,1.89853131913626,1.64881569537367,0,0,0,0.496971951695318,1.2663051166458,1.19168262731897,0.286836620748814,0.709336764396714,1.68203280042692,2.1349799145941,4.44001587150888,0,0.538842688278752,0.653847612453835,0.454072282934794,0,0,1.24864030732128,1.1409436430889,0.747243402759005,0.587172493218824,0.971237666208789,0.98315564691574,0,0.61417158655884,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0.438977620880838,0.919463387397059,0.600952235626387,0.907457465280168,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.675105328965065,0.292311015483596,0.757301322732344,0,0,0,0.302256294682921,0.508681776931463,0.966304265816484,1.09098448236334,0.573609190778008,0.365921118388786,0.662648841607426,0.69716365721711,0.414644220061482,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,1.0647612003586,1.68584690078102,1.92808823906786,2.20587945464788,1.52515610864684,2.60997681022206,1.48314438976181,1.17732879075208,1.92373578473195,0,1.40241773803446,0.8231480226628,5.88034845542168,0,0,0,0.882926198829301,0,1.02940686179115,0.548751427043128,1.1240175325762,0.301586917234893,0.277765335475589,1.62904152655162,1.03993478527958,0,0.115930404975077,0.939269553886573,0.577465791044295,0,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0.93733833986777,0.839910640994298,1.27597587518148,0.447792613514241,0.290633938513962,1.91691339582606,0,0.264145302039678,0,0,0.25248486685276,0.380987365753014,1.14596527667483,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0.224262168690721,0.43596006883328,0.36669142910475,0.258543431515556,0,0.845302752556,0.797814349754612,2.08014873822732,0.771622122786426,2.83698264046557,1.5985330740966,0,0,2.46972101034231,0.325736184293735,0.355391948742546,3.16780749173372,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,1.67737398844108,0,0,1.15825045334063,1.02738161275192,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.813795071099207,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0.601892199455438,0,0,1.32845119707087,0.921845842708516,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0.213455115606889,0.303127571446259,0,0.604780586659361,0.992431231275107,0,0.561320188866147,0.128139149255701,0,0.804269605718038,0,0.925258162815933,0.710246901252508,0.492762936082855,0.519254429183621,0.116210378459959,0.120859449591622,2.80709058424599,0.368323955743585,1.03333003348146,0.546273504020151,1.31124414959424,1.35359883872224,0.308061348417659,1.56869953835371,0,0.422206515571503,1.13733384070897,1.02056223165909,0.647747748306418,3.08454505380579,1.62567862526312,1.00337954770971,0,0,0.671624264166535,0.219259876645935,0,0.256450125116389,0.656029291399411,0,0,0.0915694648183434,0.247528499761764,1.14853107599234,1.30012049207304,0,0.193341436584244,0.770243085573222,0.614014698904518,0.551346289938122,0.107420244868274,0.145016693914229,0.681813019328807,0.356128142586949,0.165284915360978,0.576570202095319,0.127612712494584,1.31505115112215,2.32422774648643,1.25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| |||
|short_description=p9@TUBB | |||
}} |
Latest revision as of 18:03, 17 September 2015
Short description: | p9@TUBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TUBB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330914_5end |
EntrezGene: | TUBB |
HGNC: | 20778 |
UniProt: | Q5ST81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.43e-09 | 32 |
classical monocyte | 1.36e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-08 | 42 |
smooth muscle cell of the umbilical artery | 1.45e-07 | 4 |
embryonic cell | 2.64e-07 | 250 |
glomerular cell | 3.47e-07 | 7 |
kidney corpuscule cell | 3.47e-07 | 7 |
smooth muscle cell | 4.85e-07 | 43 |
smooth muscle myoblast | 4.85e-07 | 43 |
defensive cell | 6.50e-07 | 48 |
phagocyte | 6.50e-07 | 48 |