FFCP PHASE1:Hg19::chr5:35090057..35090065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=P16471,Q8TD76 | |UniProt=P16471,Q8TD76 | ||
|association_with_transcript=-292bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | |association_with_transcript=-292bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | ||
|cluster_id=chr5:35090057..35090065,- | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_27_at_PRLR_5end | |description=CAGE_peak_27_at_PRLR_5end | ||
|id=chr5:35090057..35090065,- | |id=chr5:35090057..35090065,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!3.47e-55!3;UBERON:0005290!3.47e-55!3;UBERON:0010096!3.47e-55!3;UBERON:0002298!3.20e-21!8;UBERON:0002336!1.56e-19!1;UBERON:0001018!1.56e-19!1;UBERON:0002473!1.56e-19!1;UBERON:0005340!1.56e-19!1;UBERON:0002316!1.56e-19!1;UBERON:0003544!1.56e-19!1;UBERON:0001020!1.56e-19!1;UBERON:0005970!1.56e-19!1;UBERON:0002437!1.56e-19!1;UBERON:0001017!7.13e-17!82;UBERON:0005743!4.40e-16!86;UBERON:0000955!7.50e-16!69;UBERON:0006238!7.50e-16!69;UBERON:0007023!4.36e-15!115;UBERON:0001049!5.20e-15!57;UBERON:0005068!5.20e-15!57;UBERON:0006241!5.20e-15!57;UBERON:0007135!5.20e-15!57;UBERON:0000073!1.53e-14!94;UBERON:0001016!1.53e-14!94;UBERON:0002616!1.68e-14!59;UBERON:0004733!2.20e-14!12;UBERON:0002028!2.20e-14!12;UBERON:0007277!2.20e-14!12;UBERON:0004732!2.49e-13!13;UBERON:0003075!7.08e-13!86;UBERON:0007284!7.08e-13!86;UBERON:0002346!2.73e-12!90;UBERON:0003076!1.23e-11!15;UBERON:0003057!1.23e-11!15;UBERON:0001954!1.72e-10!2;UBERON:0003022!1.72e-10!2;UBERON:0002421!1.72e-10!2;UBERON:0002600!1.72e-10!2;UBERON:0005162!1.89e-10!2;UBERON:0000122!1.89e-10!2;UBERON:0002360!2.27e-10!2;UBERON:0000094!2.27e-10!2;UBERON:0007645!2.27e-10!2;UBERON:0001871!7.26e-10!7;UBERON:0002791!8.02e-09!33;UBERON:0000033!8.61e-09!123;UBERON:0001893!1.41e-08!34;UBERON:0000153!2.31e-08!129;UBERON:0007811!2.31e-08!129;UBERON:0004121!6.37e-08!169;UBERON:0000924!1.00e-07!173;UBERON:0006601!1.00e-07!173;UBERON:0002619!1.19e-07!22;UBERON:0002771!2.79e-07!3;UBERON:0002780!3.42e-07!41;UBERON:0001890!3.42e-07!41;UBERON:0006240!3.42e-07!41;UBERON:0003080!4.96e-07!42;UBERON:0000956!7.88e-07!25;UBERON:0000203!7.88e-07!25 | |ontology_enrichment_uberon=UBERON:0001896!3.47e-55!3;UBERON:0005290!3.47e-55!3;UBERON:0010096!3.47e-55!3;UBERON:0002298!3.20e-21!8;UBERON:0002336!1.56e-19!1;UBERON:0001018!1.56e-19!1;UBERON:0002473!1.56e-19!1;UBERON:0005340!1.56e-19!1;UBERON:0002316!1.56e-19!1;UBERON:0003544!1.56e-19!1;UBERON:0001020!1.56e-19!1;UBERON:0005970!1.56e-19!1;UBERON:0002437!1.56e-19!1;UBERON:0001017!7.13e-17!82;UBERON:0005743!4.40e-16!86;UBERON:0000955!7.50e-16!69;UBERON:0006238!7.50e-16!69;UBERON:0007023!4.36e-15!115;UBERON:0001049!5.20e-15!57;UBERON:0005068!5.20e-15!57;UBERON:0006241!5.20e-15!57;UBERON:0007135!5.20e-15!57;UBERON:0000073!1.53e-14!94;UBERON:0001016!1.53e-14!94;UBERON:0002616!1.68e-14!59;UBERON:0004733!2.20e-14!12;UBERON:0002028!2.20e-14!12;UBERON:0007277!2.20e-14!12;UBERON:0004732!2.49e-13!13;UBERON:0003075!7.08e-13!86;UBERON:0007284!7.08e-13!86;UBERON:0002346!2.73e-12!90;UBERON:0003076!1.23e-11!15;UBERON:0003057!1.23e-11!15;UBERON:0001954!1.72e-10!2;UBERON:0003022!1.72e-10!2;UBERON:0002421!1.72e-10!2;UBERON:0002600!1.72e-10!2;UBERON:0005162!1.89e-10!2;UBERON:0000122!1.89e-10!2;UBERON:0002360!2.27e-10!2;UBERON:0000094!2.27e-10!2;UBERON:0007645!2.27e-10!2;UBERON:0001871!7.26e-10!7;UBERON:0002791!8.02e-09!33;UBERON:0000033!8.61e-09!123;UBERON:0001893!1.41e-08!34;UBERON:0000153!2.31e-08!129;UBERON:0007811!2.31e-08!129;UBERON:0004121!6.37e-08!169;UBERON:0000924!1.00e-07!173;UBERON:0006601!1.00e-07!173;UBERON:0002619!1.19e-07!22;UBERON:0002771!2.79e-07!3;UBERON:0002780!3.42e-07!41;UBERON:0001890!3.42e-07!41;UBERON:0006240!3.42e-07!41;UBERON:0003080!4.96e-07!42;UBERON:0000956!7.88e-07!25;UBERON:0000203!7.88e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.98e-131;3!UBERON:0005290;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;8.55e-09;53!UBERON:0002616;8.55e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.98e-131,3;UBERON:0005290,8.98e-131,3;UBERON:0010096,8.98e-131,3;UBERON:0002298,2.83e-66,6;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p27@PRLR | |short_description=p27@PRLR | ||
}} | }} |
Latest revision as of 18:10, 17 September 2015
Short description: | p27@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PRLR_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -292bp_to_uc003jjg.1, uc003jjh.1, uc003jji.1, uc003jjj.1, uc003jjk.1, uc003jjl.3_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | P16471Q8TD76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.98e-131 | 3 |
myelencephalon | 8.98e-131 | 3 |
future myelencephalon | 8.98e-131 | 3 |
brainstem | 2.83e-66 | 6 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |