FFCP PHASE1:Hg19::chr15:45422056..45422086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90527 | |EntrezGene=90527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26507 | |HGNC=26507 | ||
|TSSclassifier=strong | |||
|UniProt=A8K9Q6,Q1HG43 | |UniProt=A8K9Q6,Q1HG43 | ||
|association_with_transcript=0bp_to_ENST00000267803,ENST00000558326,ENST00000558422,ENST00000558851,ENST00000558976,ENST00000558996,ENST00000559014,ENST00000559226,ENST00000559407,ENST00000559988,NM_144565,uc001zup.2,uc001zur.1,uc010bec.2,uc010bed.1_5end | |association_with_transcript=0bp_to_ENST00000267803,ENST00000558326,ENST00000558422,ENST00000558851,ENST00000558976,ENST00000558996,ENST00000559014,ENST00000559226,ENST00000559407,ENST00000559988,NM_144565,uc001zup.2,uc001zur.1,uc010bec.2,uc010bed.1_5end | ||
|cluster_id=chr15:45422056..45422086,- | |||
|coexpression_cluster_id=C2335 | |coexpression_cluster_id=C2335 | ||
|description=CAGE_peak_1_at_DUOXA1_5end | |description=CAGE_peak_1_at_DUOXA1_5end | ||
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|ontology_enrichment_celltype=CL:0002076!2.76e-12!43;CL:0002368!2.13e-11!13;CL:0002159!1.74e-09!13;CL:0000066!2.69e-09!254;CL:0000223!8.86e-08!59;CL:0000622!1.71e-07!5;CL:0002202!2.58e-07!9;CL:0002632!2.58e-07!9;CL:0000244!8.93e-07!4;CL:0000731!8.93e-07!4 | |ontology_enrichment_celltype=CL:0002076!2.76e-12!43;CL:0002368!2.13e-11!13;CL:0002159!1.74e-09!13;CL:0000066!2.69e-09!254;CL:0000223!8.86e-08!59;CL:0000622!1.71e-07!5;CL:0002202!2.58e-07!9;CL:0002632!2.58e-07!9;CL:0000244!8.93e-07!4;CL:0000731!8.93e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.06e-17;13!CL:0002076;1.10e-16;42!CL:0002159;4.40e-11;14!CL:0002202;6.36e-11;9!CL:0002632;6.36e-11;9!CL:0000622;8.55e-11;5!CL:0002251;4.34e-10;20!CL:0000244;1.12e-09;4!CL:0000731;1.12e-09;4!CL:0000154;6.47e-09;6!CL:0000840;1.16e-08;5!CL:0002328;1.49e-07;3!CL:0000307;3.80e-07;3!CL:0002623;4.45e-07;3!CL:0000349;6.56e-07;19!CL:0002577;8.36e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;3.06e-17;13!CL:0002076;1.10e-16;42!CL:0002159;4.40e-11;14!CL:0002202;6.36e-11;9!CL:0002632;6.36e-11;9!CL:0000622;8.55e-11;5!CL:0002251;4.34e-10;20!CL:0000244;1.12e-09;4!CL:0000731;1.12e-09;4!CL:0000154;6.47e-09;6!CL:0000840;1.16e-08;5!CL:0002328;1.49e-07;3!CL:0000307;3.80e-07;3!CL:0002623;4.45e-07;3!CL:0000349;6.56e-07;19!CL:0002577;8.36e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.59e-22,42;CL:0002368,2.44e-17,13;CL:0000223,6.40e-14,58;CL:0002159,4.63e-11,14;CL:0002202,5.71e-11,9;CL:0002632,5.71e-11,9;CL:0000622,8.92e-11,5;CL:0000066,3.15e-10,253;CL:0002251,4.15e-10,20;CL:0000244,1.15e-09,4;CL:0000731,1.15e-09,4;CL:0000154,6.69e-09,6;CL:0000840,1.02e-08,5;CL:0001029,1.02e-08,5;CL:0002328,1.65e-07,3;CL:0000068,3.28e-07,3;CL:0000069,3.28e-07,3;CL:0000307,3.28e-07,3;CL:0000377,3.28e-07,3;CL:0002623,4.89e-07,3;CL:0000349,5.74e-07,19;CL:0002577,8.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;8.49e-08;58!CL:0000377;3.80e-07;3 | |ontology_enrichment_development_v019=CL:0000223;8.49e-08;58!CL:0000377;3.80e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.88e-16!169;UBERON:0000925!8.88e-16!169;UBERON:0006595!8.88e-16!169;UBERON:0001004!4.87e-13!72;UBERON:0000161!2.34e-11!35;UBERON:0000166!1.10e-09!21;UBERON:0005631!1.80e-09!14;UBERON:0000158!1.80e-09!14;UBERON:0001007!4.39e-09!155;UBERON:0001555!4.39e-09!155;UBERON:0007026!4.39e-09!155;UBERON:0005178!7.27e-09!34;UBERON:0002224!7.27e-09!34;UBERON:0000077!8.80e-09!130;UBERON:0000165!1.80e-08!28;UBERON:0000930!1.80e-08!28;UBERON:0005181!1.84e-08!35;UBERON:0000065!2.04e-08!53;UBERON:0005910!2.18e-08!6;UBERON:0001044!1.16e-07!6;UBERON:0003293!1.16e-07!6;UBERON:0003294!1.16e-07!6;UBERON:0010047!1.16e-07!6;UBERON:0000167!1.16e-07!6;UBERON:0000365!1.30e-07!5;UBERON:0007023!1.73e-07!115;UBERON:0005911!2.08e-07!82;UBERON:0007196!6.08e-07!14;UBERON:0001558!6.08e-07!14;UBERON:0000464!9.36e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!8.88e-16!169;UBERON:0000925!8.88e-16!169;UBERON:0006595!8.88e-16!169;UBERON:0001004!4.87e-13!72;UBERON:0000161!2.34e-11!35;UBERON:0000166!1.10e-09!21;UBERON:0005631!1.80e-09!14;UBERON:0000158!1.80e-09!14;UBERON:0001007!4.39e-09!155;UBERON:0001555!4.39e-09!155;UBERON:0007026!4.39e-09!155;UBERON:0005178!7.27e-09!34;UBERON:0002224!7.27e-09!34;UBERON:0000077!8.80e-09!130;UBERON:0000165!1.80e-08!28;UBERON:0000930!1.80e-08!28;UBERON:0005181!1.84e-08!35;UBERON:0000065!2.04e-08!53;UBERON:0005910!2.18e-08!6;UBERON:0001044!1.16e-07!6;UBERON:0003293!1.16e-07!6;UBERON:0003294!1.16e-07!6;UBERON:0010047!1.16e-07!6;UBERON:0000167!1.16e-07!6;UBERON:0000365!1.30e-07!5;UBERON:0007023!1.73e-07!115;UBERON:0005911!2.08e-07!82;UBERON:0007196!6.08e-07!14;UBERON:0001558!6.08e-07!14;UBERON:0000464!9.36e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.50e-11;28!UBERON:0000161;2.09e-10;19!UBERON:0000166;2.09e-10;19!UBERON:0007196;5.79e-10;15!UBERON:0001558;5.79e-10;15!UBERON:0005178;8.69e-10;34!UBERON:0002224;8.69e-10;34!UBERON:0005181;3.00e-09;35!UBERON:0001044;3.01e-08;6!UBERON:0003293;3.01e-08;6!UBERON:0003294;3.01e-08;6!UBERON:0010047;3.01e-08;6!UBERON:0003408;3.01e-08;6!UBERON:0000167;3.01e-08;6!UBERON:0000486;5.35e-08;12!UBERON:0000365;1.04e-07;5!UBERON:0001004;1.05e-07;65!UBERON:0006947;1.15e-07;3!UBERON:0004054;1.15e-07;3!UBERON:0004815;1.49e-07;3!UBERON:0002031;1.49e-07;3!UBERON:0003126;1.70e-07;7!UBERON:0001005;1.70e-07;7!UBERON:0000065;2.70e-07;44!UBERON:0000305;5.71e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000165;5.50e-11;28!UBERON:0000161;2.09e-10;19!UBERON:0000166;2.09e-10;19!UBERON:0007196;5.79e-10;15!UBERON:0001558;5.79e-10;15!UBERON:0005178;8.69e-10;34!UBERON:0002224;8.69e-10;34!UBERON:0005181;3.00e-09;35!UBERON:0001044;3.01e-08;6!UBERON:0003293;3.01e-08;6!UBERON:0003294;3.01e-08;6!UBERON:0010047;3.01e-08;6!UBERON:0003408;3.01e-08;6!UBERON:0000167;3.01e-08;6!UBERON:0000486;5.35e-08;12!UBERON:0000365;1.04e-07;5!UBERON:0001004;1.05e-07;65!UBERON:0006947;1.15e-07;3!UBERON:0004054;1.15e-07;3!UBERON:0004815;1.49e-07;3!UBERON:0002031;1.49e-07;3!UBERON:0003126;1.70e-07;7!UBERON:0001005;1.70e-07;7!UBERON:0000065;2.70e-07;44!UBERON:0000305;5.71e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.02e-20,160;UBERON:0000925,4.02e-20,160;UBERON:0006595,4.02e-20,160;UBERON:0001004,4.10e-17,74;UBERON:0000161,1.23e-13,36;UBERON:0000166,9.70e-13,22;UBERON:0001007,5.40e-12,145;UBERON:0001555,5.40e-12,145;UBERON:0007026,5.40e-12,145;UBERON:0005178,4.40e-11,34;UBERON:0002224,4.40e-11,34;UBERON:0000065,8.39e-11,54;UBERON:0005181,1.18e-10,35;UBERON:0003102,1.50e-10,99;UBERON:0000165,1.84e-10,29;UBERON:0000930,1.84e-10,29;UBERON:0005631,4.43e-10,14;UBERON:0000158,4.43e-10,14;UBERON:0007196,5.31e-10,15;UBERON:0001558,5.31e-10,15;UBERON:0000153,2.76e-09,62;UBERON:0007811,2.76e-09,62;UBERON:0000033,2.42e-08,56;UBERON:0001044,3.82e-08,6;UBERON:0003293,3.82e-08,6;UBERON:0003294,3.82e-08,6;UBERON:0010047,3.82e-08,6;UBERON:0000167,3.82e-08,6;UBERON:0001444,8.20e-08,49;UBERON:0000365,1.06e-07,5;UBERON:0005911,1.19e-07,82;UBERON:0006947,1.19e-07,3;UBERON:0004054,1.19e-07,3;UBERON:0003126,1.53e-07,7;UBERON:0001005,1.53e-07,7;UBERON:0004815,1.65e-07,3;UBERON:0002031,1.65e-07,3;UBERON:0004921,2.47e-07,118;UBERON:0001041,3.94e-07,87;UBERON:0000305,4.95e-07,7;UBERON:0008947,9.31e-07,38;UBERON:0003258,9.31e-07,38 | |||
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| ||
|short_description=p1@DUOXA1 | |short_description=p1@DUOXA1 | ||
}} | }} |
Latest revision as of 19:46, 17 September 2015
Short description: | p1@DUOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DUOXA1_5end |
Coexpression cluster: | C2335_lung_immature_thyroid_salivary_esophagus_ductus_tongue |
Association with transcript: | 0bp_to_ENST00000267803, ENST00000558326, ENST00000558422, ENST00000558851, ENST00000558976, ENST00000558996, ENST00000559014, ENST00000559226, ENST00000559407, ENST00000559988, NM_144565, uc001zup.2, uc001zur.1, uc010bec.2, uc010bed.1_5end |
EntrezGene: | DUOXA1 |
HGNC: | 26507 |
UniProt: | A8K9Q6Q1HG43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.59e-22 | 42 |
respiratory epithelial cell | 2.44e-17 | 13 |
endodermal cell | 6.40e-14 | 58 |
general ecto-epithelial cell | 4.63e-11 | 14 |
epithelial cell of tracheobronchial tree | 5.71e-11 | 9 |
epithelial cell of lower respiratory tract | 5.71e-11 | 9 |
acinar cell | 8.92e-11 | 5 |
epithelial cell | 3.15e-10 | 253 |
epithelial cell of alimentary canal | 4.15e-10 | 20 |
transitional epithelial cell | 1.15e-09 | 4 |
urothelial cell | 1.15e-09 | 4 |
protein secreting cell | 6.69e-09 | 6 |
immature conventional dendritic cell | 1.02e-08 | 5 |
common dendritic progenitor | 1.02e-08 | 5 |
bronchial epithelial cell | 1.65e-07 | 3 |
duct epithelial cell | 3.28e-07 | 3 |
branched duct epithelial cell | 3.28e-07 | 3 |
tracheal epithelial cell | 3.28e-07 | 3 |
tracheoblast | 3.28e-07 | 3 |
acinar cell of salivary gland | 4.89e-07 | 3 |
extraembryonic cell | 5.74e-07 | 19 |
placental epithelial cell | 8.54e-07 | 3 |