FFCP PHASE1:Hg19::chr2:161110328..161110372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3694 | |EntrezGene=3694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |HGNC=6161 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498478_5end | |association_with_transcript=0bp_to_ENST00000498478_5end | ||
|cluster_id=chr2:161110328..161110372,- | |||
|description=CAGE_peak_5_at_ITGB6_5end | |description=CAGE_peak_5_at_ITGB6_5end | ||
|id=chr2:161110328..161110372,- | |id=chr2:161110328..161110372,- | ||
|ontology_enrichment_celltype=CL:0000188!1.53e-18!9;CL:1000497!4.71e-13!18;CL:0002518!4.71e-13!18;CL:1000449!6.98e-12!16;CL:1000507!6.13e-10!12;CL:1000494!6.13e-10!12;CL:0002681!6.32e-09!13;CL:0002584!6.32e-09!13;CL:0000594!1.42e-08!3;CL:0000680!7.31e-07!57;CL:0000056!7.31e-07!57;CL:0000355!7.31e-07!57 | |ontology_enrichment_celltype=CL:0000188!1.53e-18!9;CL:1000497!4.71e-13!18;CL:0002518!4.71e-13!18;CL:1000449!6.98e-12!16;CL:1000507!6.13e-10!12;CL:1000494!6.13e-10!12;CL:0002681!6.32e-09!13;CL:0002584!6.32e-09!13;CL:0000594!1.42e-08!3;CL:0000680!7.31e-07!57;CL:0000056!7.31e-07!57;CL:0000355!7.31e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.47e-16;9!CL:0000515;1.28e-08;3!CL:0000680;5.40e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.25e-16,9 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.82e-08;31!UBERON:0004874;1.44e-07;1!UBERON:0006242;5.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;8.86e-43;16!UBERON:0002036;8.86e-43;16!UBERON:0002385;1.03e-20;31!UBERON:0001015;1.03e-20;31!UBERON:0000383;1.03e-20;31!UBERON:0000341;1.47e-13;2!UBERON:0005090;2.33e-13;2!UBERON:0001630;2.33e-13;2!UBERON:0001723;2.18e-09;3!UBERON:0001033;2.18e-09;3!UBERON:0002426;1.12e-07;1!UBERON:0003831;1.12e-07;1!UBERON:0003898;1.12e-07;1!UBERON:0004830;1.12e-07;1!UBERON:0003830;1.12e-07;1!UBERON:0005175;1.12e-07;1!UBERON:0001774;1.12e-07;1!UBERON:0001103;1.12e-07;1!UBERON:0000989;1.44e-07;1!UBERON:0008811;1.44e-07;1!UBERON:0001389;2.29e-07;1!UBERON:0000026;2.29e-07;1!UBERON:0008784;2.29e-07;1!UBERON:0006058;2.29e-07;1!UBERON:0003663;2.29e-07;1!UBERON:0004256;2.29e-07;1!UBERON:0004708;2.29e-07;1!UBERON:0002101;2.29e-07;1!UBERON:0004709;2.29e-07;1!UBERON:0002529;2.29e-07;1!UBERON:0010538;2.29e-07;1!UBERON:0003661;2.29e-07;1!UBERON:0010890;2.29e-07;1!UBERON:0002471;2.29e-07;1!UBERON:0001383;2.29e-07;1!UBERON:0010758;2.29e-07;1!UBERON:0010707;2.29e-07;1!UBERON:0000978;2.29e-07;1!UBERON:0002103;2.29e-07;1!UBERON:0001665;2.29e-07;1!UBERON:0003823;2.29e-07;1!UBERON:0000154;2.29e-07;1!UBERON:0010709;2.29e-07;1!UBERON:0007029;2.76e-07;1!UBERON:0002372;5.84e-07;1!UBERON:0001961;5.84e-07;1!UBERON:0001744;5.84e-07;1!UBERON:0001042;5.84e-07;1!UBERON:0001735;5.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.47e-13,2;UBERON:0005090,2.55e-13,2;UBERON:0001630,2.55e-13,2;UBERON:0001134,1.59e-09,62;UBERON:0002036,1.59e-09,62;UBERON:0003082,1.59e-09,62;UBERON:0001723,2.22e-09,3;UBERON:0001033,2.22e-09,3;UBERON:0010056,2.22e-09,3;UBERON:0003104,2.38e-09,160;UBERON:0009142,2.38e-09,160;UBERON:0002385,3.64e-09,64;UBERON:0001015,3.64e-09,64;UBERON:0000383,3.64e-09,64;UBERON:0007503,1.38e-08,78;UBERON:0002329,4.57e-08,71;UBERON:0003059,4.57e-08,71;UBERON:0007282,4.57e-08,71;UBERON:0004290,4.57e-08,71;UBERON:0009618,4.57e-08,71;UBERON:0003077,6.31e-08,72;UBERON:0007285,6.31e-08,72;UBERON:0005256,8.45e-08,122;UBERON:0007524,8.62e-08,73;UBERON:0002100,1.08e-07,199;UBERON:0002426,1.12e-07,1;UBERON:0003831,1.12e-07,1;UBERON:0003898,1.12e-07,1;UBERON:0004830,1.12e-07,1;UBERON:0003830,1.12e-07,1;UBERON:0005175,1.12e-07,1;UBERON:0001774,1.12e-07,1;UBERON:0001103,1.12e-07,1;UBERON:0010084,1.12e-07,1;UBERON:0000989,1.44e-07,1;UBERON:0008811,1.44e-07,1;UBERON:0006258,1.44e-07,1;UBERON:0005876,1.44e-07,1;UBERON:0004874,1.44e-07,1;UBERON:0005418,2.52e-07,1;UBERON:0001389,2.52e-07,1;UBERON:0000026,2.52e-07,1;UBERON:0008784,2.52e-07,1;UBERON:0006058,2.52e-07,1;UBERON:0003663,2.52e-07,1;UBERON:0004256,2.52e-07,1;UBERON:0004708,2.52e-07,1;UBERON:0002101,2.52e-07,1;UBERON:0004709,2.52e-07,1;UBERON:0002529,2.52e-07,1;UBERON:0010538,2.52e-07,1;UBERON:0003661,2.52e-07,1;UBERON:0010890,2.52e-07,1;UBERON:0002471,2.52e-07,1;UBERON:0001383,2.52e-07,1;UBERON:0004357,2.52e-07,1;UBERON:0004347,2.52e-07,1;UBERON:0005420,2.52e-07,1;UBERON:0005732,2.52e-07,1;UBERON:0010758,2.52e-07,1;UBERON:0010707,2.52e-07,1;UBERON:0000978,2.52e-07,1;UBERON:0002103,2.52e-07,1;UBERON:0001665,2.52e-07,1;UBERON:0003823,2.52e-07,1;UBERON:0000154,2.52e-07,1;UBERON:0010709,2.52e-07,1;UBERON:0005733,2.52e-07,1;UBERON:0005730,2.52e-07,1;UBERON:0007029,2.67e-07,1;UBERON:0002372,6.57e-07,1;UBERON:0001961,6.57e-07,1;UBERON:0001744,6.57e-07,1;UBERON:0001735,6.57e-07,1 | |||
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|short_description=p5@ITGB6 | |short_description=p5@ITGB6 | ||
}} | }} |
Latest revision as of 19:48, 17 September 2015
Short description: | p5@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498478_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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cell of skeletal muscle | 3.25e-16 | 9 |