FFCP PHASE1:Hg19::chr1:158224355..158224378,+: Difference between revisions
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|id=chr1:158224355..158224378,+
|short_description=p3@CD1A
|description=CAGE_peak_3_at_CD1A_5end
|association_with_transcript=428bp_to_ENST00000289429,NM_001763,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=909 | |EntrezGene=909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |HGNC=1634 | ||
|TSSclassifier=strong | |||
|UniProt=P06126 | |UniProt=P06126 | ||
|association_with_transcript=428bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |||
|cluster_id=chr1:158224355..158224378,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_3_at_CD1A_5end | |||
|id=chr1:158224355..158224378,+ | |||
|ontology_enrichment_celltype=CL:0000840!1.19e-49!5;CL:0001029!1.19e-49!5;CL:0000990!3.76e-33!8;CL:0000451!3.85e-27!10;CL:0001014!1.15e-24!2;CL:0001016!1.15e-24!2;CL:0000453!1.86e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;3.13e-69;5!CL:0000990;2.82e-46;8!CL:0000451;6.43e-38;10!CL:0001014;6.00e-34;2!CL:0001016;6.00e-34;2!CL:0000453;3.15e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.13e-69,5;CL:0001029,3.13e-69,5;CL:0000990,2.82e-46,8;CL:0000451,6.43e-38,10;CL:0001014,6.00e-34,2;CL:0001016,6.00e-34,2;CL:0000453,3.15e-14,5;CL:0002009,8.84e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.70e-10;7!UBERON:0006965;1.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.51e-16!7;UBERON:0002370!5.72e-13!4;UBERON:0005058!5.72e-13!4;UBERON:0009113!5.72e-13!4;UBERON:0003295!5.72e-13!4;UBERON:0005562!5.72e-13!4;UBERON:0002171!6.82e-13!1;UBERON:0006518!6.82e-13!1;UBERON:0008949!6.82e-13!1;UBERON:0000101!6.82e-13!1;UBERON:0002167!6.82e-13!1;UBERON:0000974!3.04e-11!10;UBERON:0003351!6.02e-09!6;UBERON:0000341!4.69e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.59e-34;2!UBERON:0005058;2.59e-34;2!UBERON:0009113;2.59e-34;2!UBERON:0004177;2.34e-30;5!UBERON:0005057;2.34e-30;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.05e-22,7;UBERON:0005057,7.05e-22,7;UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,3.85e-12,6;UBERON:0002405,8.69e-11,93;UBERON:0002390,3.27e-10,98;UBERON:0003061,3.27e-10,98;UBERON:0002193,3.22e-09,108;UBERON:0000974,1.20e-07,10;UBERON:0003408,1.20e-07,10;UBERON:0001042,1.20e-07,10;UBERON:0009145,1.20e-07,10;UBERON:0003081,2.68e-07,203;UBERON:0006562,5.00e-07,11;UBERON:0009722,5.00e-07,11;UBERON:0007690,5.00e-07,11 | |||
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|short_description=p3@CD1A | |||
}} | }} |
Latest revision as of 20:12, 17 September 2015
Short description: | p3@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD1A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 428bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.13e-69 | 5 |
common dendritic progenitor | 3.13e-69 | 5 |
conventional dendritic cell | 2.82e-46 | 8 |
dendritic cell | 6.43e-38 | 10 |
CD1a-positive Langerhans cell | 6.00e-34 | 2 |
immature CD1a-positive Langerhans cell | 6.00e-34 | 2 |
Langerhans cell | 3.15e-14 | 5 |
macrophage dendritic cell progenitor | 8.84e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 7.05e-22 | 7 |
immune organ | 7.05e-22 | 7 |
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 3.85e-12 | 6 |
immune system | 8.69e-11 | 93 |
hematopoietic system | 3.27e-10 | 98 |
blood island | 3.27e-10 | 98 |
hemolymphoid system | 3.22e-09 | 108 |
neck | 1.20e-07 | 10 |
gland of gut | 1.20e-07 | 10 |
chordate pharynx | 1.20e-07 | 10 |
pharyngeal region of foregut | 1.20e-07 | 10 |
lateral plate mesoderm | 2.68e-07 | 203 |
pharynx | 5.00e-07 | 11 |
entire pharyngeal arch endoderm | 5.00e-07 | 11 |
early pharyngeal endoderm | 5.00e-07 | 11 |