FFCP PHASE1:Hg19::chr3:3168692..3168709,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:3168692..3168709,+
|short_description=p2@TRNT1
|description=CAGE_peak_2_at_TRNT1_5end
|association_with_transcript=0bp_to_ENST00000402675,ENST00000413000,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51095 | |EntrezGene=51095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17341 | |HGNC=17341 | ||
|TSSclassifier=strong | |||
|UniProt=C9JRS7 | |UniProt=C9JRS7 | ||
|association_with_transcript=0bp_to_ENST00000402675,ENST00000413000,uc003bpn.1_5end | |||
|cluster_id=chr3:3168692..3168709,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_2_at_TRNT1_5end | |||
|id=chr3:3168692..3168709,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.88e-19!172;CL:0000566!1.88e-19!172;CL:0000738!6.29e-19!140;CL:0000988!6.36e-19!182;CL:0002032!7.05e-17!165;CL:0000837!7.05e-17!165;CL:0000542!3.60e-14!53;CL:0000051!3.60e-14!53;CL:0002031!4.61e-14!124;CL:0000838!5.28e-14!52;CL:0002087!1.12e-13!119;CL:0000084!1.45e-10!25;CL:0000827!1.45e-10!25;CL:0000791!1.44e-09!18;CL:0000789!1.44e-09!18;CL:0002420!1.44e-09!18;CL:0002419!1.44e-09!18;CL:0000790!1.44e-09!18;CL:0000003!2.28e-08!722;CL:0000134!4.68e-07!358;CL:0000219!8.61e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.77e-13;6!CL:0000791;5.67e-12;18!CL:0000789;5.67e-12;18!CL:0002419;5.67e-12;18!CL:0000094;8.72e-12;8!CL:0002393;2.69e-11;6!CL:0002397;2.69e-11;6!CL:0000084;7.54e-11;25!CL:0000542;3.43e-09;53!CL:0000081;3.31e-08;11!CL:0000623;1.24e-07;3!CL:0000767;4.64e-07;3!CL:0000898;4.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.65e-28,136;CL:0000037,7.32e-25,168;CL:0000988,8.04e-24,177;CL:0002032,8.94e-21,161;CL:0000837,8.94e-21,161;CL:0002031,2.06e-18,120;CL:0002087,3.81e-17,115;CL:0000838,1.59e-15,52;CL:0000542,4.25e-15,53;CL:0000051,4.25e-15,53;CL:0000624,8.12e-13,6;CL:0000791,6.37e-12,18;CL:0000789,6.37e-12,18;CL:0002420,6.37e-12,18;CL:0002419,6.37e-12,18;CL:0000790,6.37e-12,18;CL:0000094,9.45e-12,8;CL:0000084,8.75e-11,25;CL:0000827,8.75e-11,25;CL:0000766,2.68e-10,72;CL:0000134,1.36e-09,354;CL:0002393,2.18e-09,9;CL:0002397,2.18e-09,9;CL:0000034,3.72e-09,441;CL:0000219,3.94e-09,386;CL:0002320,4.50e-09,361;CL:0000048,6.00e-09,427;CL:0000723,1.47e-08,433;CL:0000081,3.50e-08,11;CL:0000763,5.39e-08,108;CL:0000049,5.39e-08,108;CL:0000623,1.24e-07,3;CL:0000825,1.24e-07,3;CL:0000767,4.31e-07,3;CL:0000898,4.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.67e-12;18!CL:0000051;3.43e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.36e-09,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0.376627918784408,0.382067028739756,0.492603536699674,0.472264687882075,5.90046415273356,3.45446458287491,2.32224184974114,0.919421224478927,0.30120591877825,0,0.619737604642413,0.142169232487422,2.05520307534393,4.9859586767869,5.61524452916397,3.25516306073778,0,0,0,0.436194716338694,0.377875943688809,0,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,1.6553756092201,1.03423704220986,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,2.26954089876456,1.24564449799115,1.00499466102697,0,0.65156653411535,1.21079900526674,0.368277635987565,0.632924774881769,1.26753171787165,1.06302149982522,1.25795187305026,1.57260083605093,0.901061357049038,0.16072558669708,1.42506371870624,0.39783335439818,0.547992461293902,1.75996244461323,0.546138611262131,0,0.853460445133014,0.400395987036012,0,1.32208974556972,1.90810750907073,2.27685187643779,2.34894875748376,1.91136614062614,5.28685314316103,6.1655941927969,0.790152254325231,6.09800287352883,5.50215067848831,8.01845846098086,0.501559486172034,4.23698946623668,3.31413464014313,5.84480185223734,0.891283655081389,2.3568472597987,1.99380505125259,1.35401931882508,0.640456598628376,0.390178042679635,0.328875809207352,0,0.579606171470105,2.81744470007915,2.1403266247177,0,0.453237370790265,4.21542542962113,9.27794102803101,5.06039384039006,0.95569624297229,1.30216690771284,0.950452044448374,0.903450714466637,0.76791966692651,1.24930726552346,0.473554504088034,0.821127996921047,10.2819439044614,11.4999284186908,8.83428863685074,0,0,0.383587685530591,0,0,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.351339142772504,0.589405839739707,0,0,0.324547393654683,0,0,1.43094374583205,2.85997455390064,1.85728750664782,0.596287222100115,0,0,0,0,0,0.626984899610432,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.446498641420399,0.22452937262617,0.225222960966644,1.53316637465883,0.949265659568129,0.366403487860815,2.63560834872127,3.87780264148325,0,0.496971951695318,0.633152558322899,1.72131935057184,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.538842688278752,0,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.469737994575059,0.323745888736263,0,0.204154171254893,0.122834317311768,0.309977343527296,2.37600571456411,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,1.61450672119976,0.427114777637135,0.211931901159562,0,0.515262646192195,1.03056216018252,0.18611685633159,1.0126579934476,0.194874010322397,1.7670364197088,0.276149695926898,0,1.06502877754984,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.469634776943287,0,0.462985512576611,0.570762456703795,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.880484340132261,7.25648404392702,6.48539790376326,8.45824303956746,0.253991577168676,0.763976851116555,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,7.88123040807709,17.2502059887614,9.75407075726088,0.254094624222463,0,0.773288812777695,0.335032530668698,0,2.24702107184155,0,1.24324654030811,0.12269149171914,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0.620304078368662,3.23571301227925,1.81436848265855,0.606255142892519,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.710246901252508,0.164254312027618,0,0.348631135379878,0.725156697549733,0,0.0920809889358963,0.459257792658427,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0.656029291399411,0,0.103041011647722,0.54941678891006,0.247528499761764,1.72279661398852,0.650060246036521,0,0.580024309752732,0.462145851343933,0.15350367472613,0.689182862422653,0.322260734604821,0.145016693914229,0.681813019328807,0.356128142586949,0.165284915360978,0.192190067365106,0.765676274967505,0,0,1.574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| ||
|short_description=p2@TRNT1 | |||
}} | }} |
Latest revision as of 22:46, 17 September 2015
Short description: | p2@TRNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRNT1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000402675, ENST00000413000, uc003bpn.1_5end |
EntrezGene: | TRNT1 |
HGNC: | 17341 |
UniProt: | C9JRS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.36e-09 | 371 |