FFCP PHASE1:Hg19::chr2:64881018..64881064,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9792 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30784 | |||
|TSSclassifier=strong | |||
|UniProt=Q14140 | |||
|association_with_transcript=0bp_to_ENST00000313349,NM_014755,uc002sde.1_5end | |||
|cluster_id=chr2:64881018..64881064,- | |||
|description=CAGE_peak_1_at_SERTAD2_5end | |||
|id=chr2:64881018..64881064,- | |||
|ontology_enrichment_celltype=CL:0000738!3.66e-14!140;CL:0002320!8.36e-14!365;CL:0000134!1.51e-13!358;CL:0000037!1.13e-11!172;CL:0000566!1.13e-11!172;CL:0000219!1.34e-11!390;CL:0000988!3.22e-11!182;CL:0002057!1.19e-10!42;CL:0002032!2.40e-10!165;CL:0000837!2.40e-10!165;CL:0000048!4.75e-10!430;CL:0000723!4.96e-10!436;CL:0000766!9.75e-10!76;CL:0000034!3.83e-09!444;CL:0002031!4.22e-09!124;CL:0000763!7.44e-09!112;CL:0000049!7.44e-09!112;CL:0002087!1.73e-08!119;CL:0000860!2.58e-08!45;CL:0000557!1.69e-07!71;CL:0000839!3.55e-07!70;CL:0002009!4.29e-07!65;CL:0000094!8.55e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.50e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.01e-15,136;CL:0002320,3.60e-15,361;CL:0000134,6.60e-15,354;CL:0000037,6.80e-13,168;CL:0000219,8.18e-13,386;CL:0000988,9.24e-13,177;CL:0000766,1.62e-11,72;CL:0002032,1.67e-11,161;CL:0000837,1.67e-11,161;CL:0000048,2.92e-11,427;CL:0000723,3.07e-11,433;CL:0000860,1.19e-10,42;CL:0002057,1.19e-10,42;CL:0002031,2.36e-10,120;CL:0000034,2.74e-10,441;CL:0000763,3.67e-10,108;CL:0000049,3.67e-10,108;CL:0002087,1.03e-09,115;CL:0000473,1.30e-09,48;CL:0000234,1.30e-09,48;CL:0000557,4.75e-09,67;CL:0000839,1.08e-08,66;CL:0002009,1.13e-08,61;CL:0002194,7.56e-08,59;CL:0000576,7.56e-08,59;CL:0000040,7.56e-08,59;CL:0000559,7.56e-08,59;CL:0000094,8.55e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-14!102;UBERON:0003061!1.31e-14!102;UBERON:0002384!3.33e-14!375;UBERON:0002193!4.15e-13!112;UBERON:0002371!1.32e-08!80;UBERON:0001474!6.85e-08!86;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15;UBERON:0004765!3.39e-07!101;UBERON:0001434!3.39e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.39e-10;32!UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-16,98;UBERON:0003061,1.50e-16,98;UBERON:0002384,1.40e-15,371;UBERON:0002193,8.28e-15,108;UBERON:0002371,3.47e-10,76;UBERON:0002405,7.47e-10,93;UBERON:0001474,2.60e-09,82;UBERON:0004765,6.44e-09,90;UBERON:0001434,1.41e-08,100;UBERON:0000178,1.60e-07,15;UBERON:0000179,1.60e-07,15;UBERON:0000463,1.60e-07,15;UBERON:0002204,4.91e-07,167 | |||
|phase1_expression=31.0670028552652,33.6137822508844,34.110965791225,28.0205235388765,35.3099264597557,24.4254786748103,10.1319951267324,22.7419154433659,17.2382514611893,23.3447239676433,22.3296373751177,35.1690609129577,21.1013582582763,29.208859298571,32.4769428213357,12.101852636132,9.64311244838363,15.3365118981348,15.1259167625057,39.6449807007257,48.9601658986207,29.4647438189403,13.7393273822907,16.2880565836732,19.3335664975996,44.7018423625515,36.6989634841257,35.4985623724693,123.516382930556,75.9982208232481,108.835734691201,8.27479102031034,13.5542663450213,18.1179464981726,42.5294931185856,27.8651695675346,19.9648298747696,112.461067931971,139.177846544278,122.39413108374,20.600223630073,18.7858326291008,27.560585736858,25.2992935476443,24.1840603960838,27.8971670365989,39.2805072370607,43.1726282422917,61.9412741790207,25.0292381320271,15.8819638048042,29.5602787360732,54.4698175563857,70.357830510637,70.4217730290577,32.5659247408706,24.834459655264,32.8096287289824,33.9753120531702,25.6743221660875,50.5076329381243,20.4507806115764,15.5581652944873,24.7210355308963,48.4649428509735,84.5403984789798,109.616715823221,38.4410457842817,43.8045651472969,40.3971251151517,46.6157617027694,85.8086891851026,79.1155968602211,54.503863868481,62.7182684896878,48.6408057579432,74.4738824501263,70.1326089569834,122.794348236569,29.9263380928311,50.3259193313698,57.7218725896243,17.5996244461323,32.7683166757279,39.1384071699964,34.9918782504536,40.8403906776733,33.9103939573145,27.1028397841793,39.1162039359499,121.811575389422,83.3876808906733,120.033793631322,38.3296852879175,31.9489880899476,30.5525538339089,30.686724137758,28.689785680689,38.6530818119077,9.52963023726865,17.5998023982139,17.0441210064504,29.2240092611867,11.3638666022877,16.4979308185909,17.5011776721061,21.3935052374362,8.32593578216889,10.1446291096705,34.531959966772,23.766101529583,28.4007024020351,28.1744470007915,33.4426035112141,42.8595647600405,10.8776968989664,11.8798353016596,11.6833331464094,20.4945950535797,12.7426165729639,12.370585623272,7.60361635558699,19.2736152419549,19.7099381177804,8.74515085866421,11.1285308460688,13.1380479507367,44.1518767662164,43.0578715211447,38.8129402405901,34.1329612839546,14.0847180537764,15.4713699830672,33.9752803241492,46.1230877785018,55.910756318878,44.5360130348616,106.086401725975,32.6145119216034,29.490009862521,22.1343659946678,16.3723844372141,38.6153005590095,45.6064864624848,14.2800853208061,11.8408221363502,10.9025527625469,218.457411863693,133.84680912255,158.612353067724,6.55915944310127,4.30117297553062,9.02565304179745,5.08777147731609,13.0044825225071,12.105193845363,8.15080369493561,9.04458657092651,13.519117982095,17.4054718637629,23.7669297094397,25.8492515944294,18.0605922585645,9.55924008899259,8.91156142669936,7.0546785344423,4.26605807989723,6.0810199460994,6.13266549863533,5.69559395740877,2.5648244150257,131.780417436063,162.867710942297,49.7147219442489,49.2002232178365,28.1119735895367,24.0984709080058,26.1021324881421,33.3388279266456,20.7450712052654,23.4847790605351,19.98007142179,15.2493407345885,9.0256150286691,10.9519475086017,13.168096205109,2.88087962239999,15.4652145010306,18.1052844561586,18.2550982894224,17.9338416662161,20.3161682653713,20.2341180460164,24.859792786298,6.73708765141148,13.6346092216062,10.125926555225,29.7000714320513,37.0900393917835,53.6995203543436,25.8702531053846,8.58514181165738,17.391474262203,13.8532057742091,42.5808292254413,26.3579504387157,33.0523729594513,12.4775401476023,55.4313974278583,54.6706915375533,68.8778678768576,39.3119335870567,49.1560564467354,31.1745053455211,41.5040589619445,47.4261493597958,80.7752772786337,35.8455959426643,45.1044503347267,22.9537400682713,38.3410359917943,58.2347127755761,41.033663339138,12.1754337492877,19.3649745619493,15.7742527463952,7.56236978003491,7.68672656264614,11.3870064012128,11.8173602717522,7.0649838245176,9.12443397689575,104.821186660977,101.632068234476,34.5337303381201,59.9034627161253,18.0469870417396,9.81946440330704,12.1380976856233,13.7376287033585,10.2573394641126,13.7264049778216,8.30447166888838,7.9550471814497,13.5392810936489,8.46443745282059,5.16708818237254,29.4507724987236,13.9935163852676,13.2307840246988,20.2808055714929,12.7767538168091,10.0434284135839,11.0365774853663,31.9769940212095,27.4508496477641,28.5350742062426,19.1082980537953,19.4020916754448,47.7756377018013,26.064664424826,20.7986957055916,38.9694623468238,21.9108465402895,17.6113041353732,20.9331349253557,19.9083770407943,15.4105863310025,3.1608175918371,4.29243081047436,22.4057475539532,31.3565715286578,21.8487808564431,11.2480600784132,25.8692477426244,16.871236571844,24.180801129769,27.6102241588264,23.0029607499127,1.97065295158377,17.4335899346188,58.0518723514162,49.8655038822687,46.9621852346133,26.0976345540815,64.9380323449072,22.2713149699089,22.2394179829517,30.1284553620738,19.2219557020107,39.4440477030198,14.4649098805515,3.92364061949952,9.46063887090255,23.3981805521578,17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| |||
|short_description=p1@SERTAD2 | |||
}} |
Latest revision as of 23:50, 17 September 2015
Short description: | p1@SERTAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERTAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313349, NM_014755, uc002sde.1_5end |
EntrezGene: | SERTAD2 |
HGNC: | 30784 |
UniProt: | Q14140 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.01e-15 | 136 |
connective tissue cell | 3.60e-15 | 361 |
mesenchymal cell | 6.60e-15 | 354 |
hematopoietic stem cell | 6.80e-13 | 168 |
motile cell | 8.18e-13 | 386 |
hematopoietic cell | 9.24e-13 | 177 |
myeloid leukocyte | 1.62e-11 | 72 |
hematopoietic oligopotent progenitor cell | 1.67e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-11 | 161 |
multi fate stem cell | 2.92e-11 | 427 |
somatic stem cell | 3.07e-11 | 433 |
classical monocyte | 1.19e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-10 | 42 |
hematopoietic lineage restricted progenitor cell | 2.36e-10 | 120 |
stem cell | 2.74e-10 | 441 |
myeloid cell | 3.67e-10 | 108 |
common myeloid progenitor | 3.67e-10 | 108 |
nongranular leukocyte | 1.03e-09 | 115 |
defensive cell | 1.30e-09 | 48 |
phagocyte | 1.30e-09 | 48 |
granulocyte monocyte progenitor cell | 4.75e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.08e-08 | 66 |
macrophage dendritic cell progenitor | 1.13e-08 | 61 |
monopoietic cell | 7.56e-08 | 59 |
monocyte | 7.56e-08 | 59 |
monoblast | 7.56e-08 | 59 |
promonocyte | 7.56e-08 | 59 |
granulocyte | 8.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-16 | 98 |
blood island | 1.50e-16 | 98 |
connective tissue | 1.40e-15 | 371 |
hemolymphoid system | 8.28e-15 | 108 |
bone marrow | 3.47e-10 | 76 |
immune system | 7.47e-10 | 93 |
bone element | 2.60e-09 | 82 |
skeletal element | 6.44e-09 | 90 |
skeletal system | 1.41e-08 | 100 |
blood | 1.60e-07 | 15 |
haemolymphatic fluid | 1.60e-07 | 15 |
organism substance | 1.60e-07 | 15 |
musculoskeletal system | 4.91e-07 | 167 |