FFCP PHASE1:Hg19::chr6:31830586..31830624,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4758 | |EntrezGene=4758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7758 | |HGNC=7758 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIJ4,E9PIF4 | |UniProt=E9PIJ4,E9PIF4 | ||
|association_with_transcript=0bp_to_ENST00000479533,ENST00000491768_5end | |association_with_transcript=0bp_to_ENST00000479533,ENST00000491768_5end | ||
|cluster_id=chr6:31830586..31830624,- | |||
|description=CAGE_peak_1_at_NEU1_5end | |description=CAGE_peak_1_at_NEU1_5end | ||
|id=chr6:31830586..31830624,- | |id=chr6:31830586..31830624,- | ||
|ontology_enrichment_celltype=CL:0000012!1.22e-18!682;CL:0000548!1.34e-18!679;CL:0000004!1.34e-18!679;CL:0000255!1.34e-18!679;CL:0000144!1.43e-17!625;CL:0000766!1.33e-16!76;CL:0002371!9.59e-16!591;CL:0000557!5.15e-15!71;CL:0000063!3.49e-14!578;CL:0000839!1.08e-13!70;CL:0002194!4.93e-13!63;CL:0000576!4.93e-13!63;CL:0000040!4.93e-13!63;CL:0000559!4.93e-13!63;CL:0002009!6.04e-13!65;CL:0002057!1.11e-11!42;CL:0000048!1.52e-10!430;CL:0000003!1.86e-10!722;CL:0000860!8.35e-10!45;CL:0000034!1.53e-09!444;CL:0002320!1.63e-09!365;CL:0000723!1.68e-09!436;CL:0000134!9.46e-09!358;CL:0000219!4.21e-08!390;CL:0000763!5.30e-08!112;CL:0000049!5.30e-08!112 | |ontology_enrichment_celltype=CL:0000012!1.22e-18!682;CL:0000548!1.34e-18!679;CL:0000004!1.34e-18!679;CL:0000255!1.34e-18!679;CL:0000144!1.43e-17!625;CL:0000766!1.33e-16!76;CL:0002371!9.59e-16!591;CL:0000557!5.15e-15!71;CL:0000063!3.49e-14!578;CL:0000839!1.08e-13!70;CL:0002194!4.93e-13!63;CL:0000576!4.93e-13!63;CL:0000040!4.93e-13!63;CL:0000559!4.93e-13!63;CL:0002009!6.04e-13!65;CL:0002057!1.11e-11!42;CL:0000048!1.52e-10!430;CL:0000003!1.86e-10!722;CL:0000860!8.35e-10!45;CL:0000034!1.53e-09!444;CL:0002320!1.63e-09!365;CL:0000723!1.68e-09!436;CL:0000134!9.46e-09!358;CL:0000219!4.21e-08!390;CL:0000763!5.30e-08!112;CL:0000049!5.30e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.30e-11;39!CL:0000234;1.30e-11;39!CL:0000860;1.80e-10;33!CL:0002057;1.80e-10;33!CL:0000576;1.55e-08;48!CL:0000766;2.47e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.35e-19,72;CL:0000557,1.48e-17,67;CL:0000839,4.26e-16,66;CL:0002194,1.55e-15,59;CL:0000576,1.55e-15,59;CL:0000040,1.55e-15,59;CL:0000559,1.55e-15,59;CL:0002009,2.22e-15,61;CL:0000473,5.47e-15,48;CL:0000234,5.47e-15,48;CL:0000860,1.11e-11,42;CL:0002057,1.11e-11,42;CL:0000048,4.90e-11,427;CL:0000034,5.30e-10,441;CL:0000723,5.82e-10,433;CL:0002320,7.41e-10,361;CL:0000763,3.12e-09,108;CL:0000049,3.12e-09,108;CL:0000134,4.43e-09,354;CL:0000219,2.11e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.99e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.55e-20!115;UBERON:0000926!1.55e-16!448;UBERON:0004120!1.55e-16!448;UBERON:0006603!1.55e-16!448;UBERON:0001474!1.48e-15!86;UBERON:0002371!8.30e-15!80;UBERON:0003081!6.66e-14!216;UBERON:0004765!5.14e-12!101;UBERON:0001434!5.14e-12!101;UBERON:0005172!9.44e-11!55;UBERON:0005173!9.44e-11!55;UBERON:0002193!9.51e-11!112;UBERON:0002417!5.75e-10!61;UBERON:0000916!5.75e-10!61;UBERON:0002390!1.13e-09!102;UBERON:0003061!1.13e-09!102;UBERON:0002204!2.44e-09!167;UBERON:0002384!2.68e-08!375;UBERON:0000923!2.04e-07!604;UBERON:0005291!2.04e-07!604;UBERON:0006598!2.04e-07!604;UBERON:0002532!2.04e-07!604;UBERON:0000062!2.93e-07!511;UBERON:0000922!2.97e-07!612;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0000468!4.77e-07!659;UBERON:0002113!5.39e-07!27;UBERON:0003918!5.39e-07!27;UBERON:0005095!5.39e-07!27;UBERON:0007687!5.39e-07!27 | |ontology_enrichment_uberon=UBERON:0002405!1.55e-20!115;UBERON:0000926!1.55e-16!448;UBERON:0004120!1.55e-16!448;UBERON:0006603!1.55e-16!448;UBERON:0001474!1.48e-15!86;UBERON:0002371!8.30e-15!80;UBERON:0003081!6.66e-14!216;UBERON:0004765!5.14e-12!101;UBERON:0001434!5.14e-12!101;UBERON:0005172!9.44e-11!55;UBERON:0005173!9.44e-11!55;UBERON:0002193!9.51e-11!112;UBERON:0002417!5.75e-10!61;UBERON:0000916!5.75e-10!61;UBERON:0002390!1.13e-09!102;UBERON:0003061!1.13e-09!102;UBERON:0002204!2.44e-09!167;UBERON:0002384!2.68e-08!375;UBERON:0000923!2.04e-07!604;UBERON:0005291!2.04e-07!604;UBERON:0006598!2.04e-07!604;UBERON:0002532!2.04e-07!604;UBERON:0000062!2.93e-07!511;UBERON:0000922!2.97e-07!612;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0000468!4.77e-07!659;UBERON:0002113!5.39e-07!27;UBERON:0003918!5.39e-07!27;UBERON:0005095!5.39e-07!27;UBERON:0007687!5.39e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0005172;1.74e-07;52!UBERON:0005173;1.74e-07;52!UBERON:0002113;4.38e-07;24!UBERON:0011143;4.38e-07;24 | |||
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| ||
|short_description=p1@NEU1 | |short_description=p1@NEU1 | ||
}} | }} |
Latest revision as of 00:44, 18 September 2015
Short description: | p1@NEU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479533, ENST00000491768_5end |
EntrezGene: | NEU1 |
HGNC: | 7758 |
UniProt: | E9PIJ4E9PIF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.35e-19 | 72 |
granulocyte monocyte progenitor cell | 1.48e-17 | 67 |
myeloid lineage restricted progenitor cell | 4.26e-16 | 66 |
monopoietic cell | 1.55e-15 | 59 |
monocyte | 1.55e-15 | 59 |
monoblast | 1.55e-15 | 59 |
promonocyte | 1.55e-15 | 59 |
macrophage dendritic cell progenitor | 2.22e-15 | 61 |
defensive cell | 5.47e-15 | 48 |
phagocyte | 5.47e-15 | 48 |
classical monocyte | 1.11e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-11 | 42 |
multi fate stem cell | 4.90e-11 | 427 |
stem cell | 5.30e-10 | 441 |
somatic stem cell | 5.82e-10 | 433 |
connective tissue cell | 7.41e-10 | 361 |
myeloid cell | 3.12e-09 | 108 |
common myeloid progenitor | 3.12e-09 | 108 |
mesenchymal cell | 4.43e-09 | 354 |
motile cell | 2.11e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone element | 7.72e-18 | 82 |
bone marrow | 3.99e-17 | 76 |
immune system | 5.28e-17 | 93 |
skeletal element | 1.70e-16 | 90 |
mesoderm | 8.61e-16 | 315 |
mesoderm-derived structure | 8.61e-16 | 315 |
presumptive mesoderm | 8.61e-16 | 315 |
skeletal system | 9.57e-14 | 100 |
lateral plate mesoderm | 1.54e-12 | 203 |
hemolymphoid system | 3.00e-12 | 108 |
hematopoietic system | 3.73e-11 | 98 |
blood island | 3.73e-11 | 98 |
musculoskeletal system | 1.13e-10 | 167 |
abdomen element | 1.38e-10 | 54 |
abdominal segment element | 1.38e-10 | 54 |
abdominal segment of trunk | 8.42e-10 | 60 |
abdomen | 8.42e-10 | 60 |
connective tissue | 1.31e-08 | 371 |
developing anatomical structure | 5.30e-08 | 581 |
urinary system structure | 4.50e-07 | 47 |
embryo | 5.98e-07 | 592 |
kidney | 7.71e-07 | 26 |
kidney mesenchyme | 7.71e-07 | 26 |
upper urinary tract | 7.71e-07 | 26 |
kidney rudiment | 7.71e-07 | 26 |
kidney field | 7.71e-07 | 26 |
renal system | 7.91e-07 | 48 |