FFCP PHASE1:Hg19::chr5:49737190..49737239,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:49737190..49737239,- to FFCP PHASE1:Hg19::chr5:49737190..49737239,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=133418 | |EntrezGene=133418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30465 | |HGNC=30465 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PCB8,D6RIB9 | |UniProt=Q6PCB8,D6RIB9 | ||
|association_with_transcript=0bp_to_ENST00000303221,ENST00000510295,NM_198449,uc003jom.2,uc010ivr.2_5end | |||
|cluster_id=chr5:49737190..49737239,- | |||
|description=CAGE_peak_2_at_EMB_5end | |||
|id=chr5:49737190..49737239,- | |||
|ontology_enrichment_celltype=CL:0000037!4.29e-32!172;CL:0000566!4.29e-32!172;CL:0000738!7.53e-30!140;CL:0000988!4.08e-29!182;CL:0002032!2.48e-28!165;CL:0000837!2.48e-28!165;CL:0002087!6.99e-28!119;CL:0002031!3.36e-22!124;CL:0000763!2.58e-15!112;CL:0000049!2.58e-15!112;CL:0000766!2.88e-14!76;CL:0002194!1.67e-13!63;CL:0000576!1.67e-13!63;CL:0000040!1.67e-13!63;CL:0000559!1.67e-13!63;CL:0002009!4.42e-13!65;CL:0000838!6.71e-13!52;CL:0000542!8.34e-13!53;CL:0000051!8.34e-13!53;CL:0000557!3.94e-11!71;CL:0000839!2.42e-10!70;CL:0000084!3.71e-10!25;CL:0000827!3.71e-10!25;CL:0002057!1.11e-09!42;CL:0000791!1.79e-09!18;CL:0000789!1.79e-09!18;CL:0002420!1.79e-09!18;CL:0002419!1.79e-09!18;CL:0000790!1.79e-09!18;CL:0000860!1.14e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.21e-10;25!CL:0000791;6.54e-10;18!CL:0000789;6.54e-10;18!CL:0002419;6.54e-10;18!CL:0000860;1.68e-09;33!CL:0002057;1.68e-09;33!CL:0000473;2.73e-09;39!CL:0000234;2.73e-09;39!CL:0000576;1.35e-08;48!CL:0002087;1.87e-08;104!CL:0000542;3.13e-08;53!CL:0000738;9.79e-08;136!CL:0000763;6.60e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.19e-36,168;CL:0000738,1.93e-33,136;CL:0000988,2.08e-33,177;CL:0002087,4.33e-32,115;CL:0002032,7.70e-32,161;CL:0000837,7.70e-32,161;CL:0002031,1.04e-24,120;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0000766,4.19e-17,72;CL:0002194,9.20e-17,59;CL:0000576,9.20e-17,59;CL:0000040,9.20e-17,59;CL:0000559,9.20e-17,59;CL:0002009,6.46e-16,61;CL:0000838,1.66e-13,52;CL:0000542,2.09e-13,53;CL:0000051,2.09e-13,53;CL:0000557,2.82e-13,67;CL:0000839,3.00e-12,66;CL:0000473,4.56e-11,48;CL:0000234,4.56e-11,48;CL:0000084,1.49e-10,25;CL:0000827,1.49e-10,25;CL:0000791,6.21e-10,18;CL:0000789,6.21e-10,18;CL:0002420,6.21e-10,18;CL:0002419,6.21e-10,18;CL:0000790,6.21e-10,18;CL:0000860,1.03e-09,42;CL:0002057,1.03e-09,42 | |||
|ontology_enrichment_development_v019=CL:0000790;6.54e-10;18!CL:0000051;3.13e-08;53!CL:0002057;2.12e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!7.76e-07!51;DOID:0060083!7.76e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.87e-07,51;DOID:0060083,2.87e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.43e-17!102;UBERON:0003061!9.43e-17!102;UBERON:0002193!2.10e-13!112;UBERON:0002371!6.87e-11!80;UBERON:0001474!3.60e-09!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.82e-19,98;UBERON:0003061,9.82e-19,98;UBERON:0002193,2.96e-15,108;UBERON:0002371,1.56e-12,76;UBERON:0002405,1.09e-10,93;UBERON:0001474,1.21e-10,82;UBERON:0004765,2.04e-09,90 | |||
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| ||
|short_description=p2@EMB | |||
}} | }} |
Latest revision as of 01:40, 18 September 2015
Short description: | p2@EMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000303221, ENST00000510295, NM_198449, uc003jom.2, uc010ivr.2_5end |
EntrezGene: | EMB |
HGNC: | 30465 |
UniProt: | Q6PCB8D6RIB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.82e-19 | 98 |
blood island | 9.82e-19 | 98 |
hemolymphoid system | 2.96e-15 | 108 |
bone marrow | 1.56e-12 | 76 |
immune system | 1.09e-10 | 93 |
bone element | 1.21e-10 | 82 |
skeletal element | 2.04e-09 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.87e-07 | 51 |
immune system cancer | 2.87e-07 | 51 |