FFCP PHASE1:Hg19::chr2:170441293..170441324,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:170441293..170441324,+ to FFCP PHASE1:Hg19::chr2:170441293..170441324,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9360 | |EntrezGene=9360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14650 | |HGNC=14650 | ||
|TSSclassifier=strong | |||
|UniProt=C9JN15 | |UniProt=C9JN15 | ||
|association_with_transcript=136bp_to_ENST00000414307,uc002ufc.1_5end | |||
|cluster_id=chr2:170441293..170441324,+ | |||
|description=CAGE_peak_2_at_PPIG_5end | |||
|id=chr2:170441293..170441324,+ | |||
|ontology_enrichment_celltype=CL:0002032!8.09e-17!165;CL:0000837!8.09e-17!165;CL:0000037!7.75e-16!172;CL:0000566!7.75e-16!172;CL:0000738!3.41e-15!140;CL:0002031!3.05e-14!124;CL:0000988!1.65e-13!182;CL:0000763!3.96e-13!112;CL:0000049!3.96e-13!112;CL:0000766!8.77e-13!76;CL:0002087!2.38e-12!119;CL:0000557!1.46e-10!71;CL:0000839!1.66e-10!70;CL:0002057!2.89e-10!42;CL:0002009!1.84e-09!65;CL:0000860!7.36e-09!45;CL:0002194!7.37e-09!63;CL:0000576!7.37e-09!63;CL:0000040!7.37e-09!63;CL:0000559!7.37e-09!63;CL:0000134!3.62e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-09;33!CL:0002057;4.05e-09;33!CL:0000473;1.08e-07;39!CL:0000234;1.08e-07;39!CL:0000576;2.67e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.78e-17,161;CL:0000837,1.78e-17,161;CL:0000037,1.92e-16,168;CL:0000738,6.88e-16,136;CL:0002031,5.69e-15,120;CL:0000988,1.64e-14,177;CL:0000763,7.20e-14,108;CL:0000049,7.20e-14,108;CL:0000766,8.70e-14,72;CL:0002087,5.10e-13,115;CL:0000557,1.84e-11,67;CL:0000839,2.06e-11,66;CL:0002009,2.44e-10,61;CL:0000860,2.89e-10,42;CL:0002057,2.89e-10,42;CL:0000473,4.15e-10,48;CL:0000234,4.15e-10,48;CL:0002194,1.04e-09,59;CL:0000576,1.04e-09,59;CL:0000040,1.04e-09,59;CL:0000559,1.04e-09,59;CL:0000134,8.99e-08,354;CL:0002320,5.86e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-12!115;UBERON:0002390!1.52e-11!102;UBERON:0003061!1.52e-11!102;UBERON:0002193!9.64e-09!112;UBERON:0002371!1.56e-08!80;UBERON:0001474!2.37e-08!86;UBERON:0004765!1.17e-07!101;UBERON:0001434!1.17e-07!101;UBERON:0001049!1.39e-07!57;UBERON:0005068!1.39e-07!57;UBERON:0006241!1.39e-07!57;UBERON:0007135!1.39e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.91e-12,98;UBERON:0003061,2.91e-12,98;UBERON:0007023,4.73e-12,114;UBERON:0002193,2.94e-09,108;UBERON:0002371,3.30e-09,76;UBERON:0001474,5.62e-09,82;UBERON:0004765,2.78e-08,90;UBERON:0001049,1.29e-07,56;UBERON:0005068,1.29e-07,56;UBERON:0006241,1.29e-07,56;UBERON:0007135,1.29e-07,56;UBERON:0001434,1.42e-07,100;UBERON:0000073,3.87e-07,53;UBERON:0002616,3.87e-07,53;UBERON:0002384,4.94e-07,371 | |||
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| ||
|short_description=p2@PPIG | |||
}} | }} |
Latest revision as of 02:24, 18 September 2015
Short description: | p2@PPIG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPIG_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000414307, uc002ufc.1_5end |
EntrezGene: | PPIG |
HGNC: | 14650 |
UniProt: | C9JN15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.78e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-17 | 161 |
hematopoietic stem cell | 1.92e-16 | 168 |
leukocyte | 6.88e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 5.69e-15 | 120 |
hematopoietic cell | 1.64e-14 | 177 |
myeloid cell | 7.20e-14 | 108 |
common myeloid progenitor | 7.20e-14 | 108 |
myeloid leukocyte | 8.70e-14 | 72 |
nongranular leukocyte | 5.10e-13 | 115 |
granulocyte monocyte progenitor cell | 1.84e-11 | 67 |
myeloid lineage restricted progenitor cell | 2.06e-11 | 66 |
macrophage dendritic cell progenitor | 2.44e-10 | 61 |
classical monocyte | 2.89e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-10 | 42 |
defensive cell | 4.15e-10 | 48 |
phagocyte | 4.15e-10 | 48 |
monopoietic cell | 1.04e-09 | 59 |
monocyte | 1.04e-09 | 59 |
monoblast | 1.04e-09 | 59 |
promonocyte | 1.04e-09 | 59 |
mesenchymal cell | 8.99e-08 | 354 |
connective tissue cell | 5.86e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.91e-12 | 98 |
blood island | 2.91e-12 | 98 |
adult organism | 4.73e-12 | 114 |
hemolymphoid system | 2.94e-09 | 108 |
bone marrow | 3.30e-09 | 76 |
bone element | 5.62e-09 | 82 |
skeletal element | 2.78e-08 | 90 |
neural tube | 1.29e-07 | 56 |
neural rod | 1.29e-07 | 56 |
future spinal cord | 1.29e-07 | 56 |
neural keel | 1.29e-07 | 56 |
skeletal system | 1.42e-07 | 100 |
regional part of nervous system | 3.87e-07 | 53 |
regional part of brain | 3.87e-07 | 53 |
connective tissue | 4.94e-07 | 371 |