FFCP PHASE1:Hg19::chr4:5894905..5894913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1400 | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |HGNC=2365 | ||
|TSSclassifier=strong | |||
|UniProt=A0EJG6,B3KT07,Q96I11 | |UniProt=A0EJG6,B3KT07,Q96I11 | ||
|association_with_transcript=-120bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | |association_with_transcript=-120bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | ||
|cluster_id=chr4:5894905..5894913,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_CRMP1_5end | |description=CAGE_peak_10_at_CRMP1_5end | ||
|id=chr4:5894905..5894913,- | |id=chr4:5894905..5894913,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p10@CRMP1 | |short_description=p10@CRMP1 | ||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p10@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CRMP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -120bp_to_ENST00000324989, NM_001014809, uc003gis.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | A0EJG6B3KT07Q96I11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.27e-23 | 5 |
neocortex | 6.11e-22 | 20 |
regional part of cerebral cortex | 4.35e-20 | 22 |
cerebral cortex | 7.67e-18 | 25 |
pallium | 7.67e-18 | 25 |
regional part of telencephalon | 3.53e-14 | 32 |
cerebral hemisphere | 3.53e-14 | 32 |
brain grey matter | 2.12e-13 | 34 |
gray matter | 2.12e-13 | 34 |
telencephalon | 2.12e-13 | 34 |
central nervous system | 1.68e-12 | 81 |
nervous system | 2.66e-11 | 89 |
regional part of forebrain | 2.98e-11 | 41 |
forebrain | 2.98e-11 | 41 |
anterior neural tube | 2.98e-11 | 41 |
future forebrain | 2.98e-11 | 41 |
duodenum | 7.42e-11 | 2 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
regional part of nervous system | 7.42e-09 | 53 |
regional part of brain | 7.42e-09 | 53 |
neural tube | 2.06e-08 | 56 |
neural rod | 2.06e-08 | 56 |
future spinal cord | 2.06e-08 | 56 |
neural keel | 2.06e-08 | 56 |
pre-chordal neural plate | 9.09e-08 | 61 |
small intestine | 5.08e-07 | 4 |
parietal lobe | 5.70e-07 | 5 |