FFCP PHASE1:Hg19::chr21:36041275..36041282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54102 | |EntrezGene=54102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2065 | |HGNC=2065 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NY7 | |UniProt=Q96NY7 | ||
|association_with_transcript=-405bp_to_ENST00000349499,ENST00000360731,NM_053277,uc002yuf.1,uc010gmt.1_5end | |association_with_transcript=-405bp_to_ENST00000349499,ENST00000360731,NM_053277,uc002yuf.1,uc010gmt.1_5end | ||
|cluster_id=chr21:36041275..36041282,+ | |||
|coexpression_cluster_id=C789 | |coexpression_cluster_id=C789 | ||
|description=CAGE_peak_5_at_CLIC6_5end | |description=CAGE_peak_5_at_CLIC6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002586!3.12e-10!3;CL:0000149!9.61e-08!4 | |ontology_enrichment_celltype=CL:0002586!3.12e-10!3;CL:0000149!9.61e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.72e-66;3!CL:0000149;4.01e-50;4!CL:0000147;6.52e-15;14 | |ontology_enrichment_celltype_v019=CL:0002586;1.72e-66;3!CL:0000149;4.01e-50;4!CL:0000147;6.52e-15;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.54e-66,3;CL:0000149,3.69e-50,4;CL:0000147,6.37e-15,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.12e-08;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.12e-08;3 | ||
|ontology_enrichment_disease=DOID:114!4.17e-07!2 | |ontology_enrichment_disease=DOID:114!4.17e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-26!115;UBERON:0000966!2.00e-10!5;UBERON:0005388!2.00e-10!5;UBERON:0001802!2.00e-10!5;UBERON:0001781!3.12e-10!3;UBERON:0001782!3.12e-10!3;UBERON:0005424!3.12e-10!3;UBERON:0001896!4.86e-10!3;UBERON:0005290!4.86e-10!3;UBERON:0010096!4.86e-10!3;UBERON:0000020!8.01e-07!23 | |ontology_enrichment_uberon=UBERON:0007023!3.56e-26!115;UBERON:0000966!2.00e-10!5;UBERON:0005388!2.00e-10!5;UBERON:0001802!2.00e-10!5;UBERON:0001781!3.12e-10!3;UBERON:0001782!3.12e-10!3;UBERON:0005424!3.12e-10!3;UBERON:0001896!4.86e-10!3;UBERON:0005290!4.86e-10!3;UBERON:0010096!4.86e-10!3;UBERON:0000020!8.01e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.66e-70;5!UBERON:0005388;1.66e-70;5!UBERON:0001802;1.66e-70;5!UBERON:0001781;1.72e-66;3!UBERON:0001782;1.72e-66;3!UBERON:0001896;3.87e-30;3!UBERON:0005290;3.87e-30;3!UBERON:0000019;5.17e-19;19!UBERON:0000047;5.17e-19;19!UBERON:0004088;5.17e-19;19!UBERON:0010230;5.17e-19;19!UBERON:0007625;8.93e-19;11!UBERON:0000970;4.35e-18;20!UBERON:0002104;3.00e-17;21!UBERON:0001456;3.00e-17;21!UBERON:0000020;8.61e-16;23!UBERON:0002298;1.26e-15;6!UBERON:0001032;3.75e-15;24!UBERON:0004456;3.75e-15;24!UBERON:0004733;2.70e-08;12!UBERON:0002028;2.70e-08;12!UBERON:0004732;1.00e-07;13!UBERON:0000033;2.63e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.66e-70;5!UBERON:0005388;1.66e-70;5!UBERON:0001802;1.66e-70;5!UBERON:0001781;1.72e-66;3!UBERON:0001782;1.72e-66;3!UBERON:0001896;3.87e-30;3!UBERON:0005290;3.87e-30;3!UBERON:0000019;5.17e-19;19!UBERON:0000047;5.17e-19;19!UBERON:0004088;5.17e-19;19!UBERON:0010230;5.17e-19;19!UBERON:0007625;8.93e-19;11!UBERON:0000970;4.35e-18;20!UBERON:0002104;3.00e-17;21!UBERON:0001456;3.00e-17;21!UBERON:0000020;8.61e-16;23!UBERON:0002298;1.26e-15;6!UBERON:0001032;3.75e-15;24!UBERON:0004456;3.75e-15;24!UBERON:0004733;2.70e-08;12!UBERON:0002028;2.70e-08;12!UBERON:0004732;1.00e-07;13!UBERON:0000033;2.63e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.54e-66,3;UBERON:0005424,1.54e-66,3;UBERON:0000966,6.44e-59,6;UBERON:0005388,6.44e-59,6;UBERON:0001802,6.44e-59,6;UBERON:0001781,3.69e-50,4;UBERON:0001896,3.59e-30,3;UBERON:0005290,3.59e-30,3;UBERON:0010096,3.59e-30,3;UBERON:0007625,8.66e-19,11;UBERON:0000019,4.26e-18,20;UBERON:0000047,4.26e-18,20;UBERON:0010312,4.26e-18,20;UBERON:0004088,4.26e-18,20;UBERON:0010230,4.26e-18,20;UBERON:0003072,4.26e-18,20;UBERON:0004128,4.26e-18,20;UBERON:0003071,4.26e-18,20;UBERON:0000970,2.93e-17,21;UBERON:0002104,2.93e-17,21;UBERON:0001456,1.70e-16,22;UBERON:0002298,1.22e-15,6;UBERON:0000020,3.68e-15,24;UBERON:0001032,3.68e-15,24;UBERON:0004456,3.68e-15,24;UBERON:0005085,7.79e-12,31;UBERON:0003075,1.38e-09,82;UBERON:0007284,1.38e-09,82;UBERON:0002346,3.84e-09,86;UBERON:0004733,2.65e-08,12;UBERON:0002028,2.65e-08,12;UBERON:0007277,2.65e-08,12;UBERON:0004732,9.84e-08,13;UBERON:0001444,1.28e-07,49;UBERON:0010371,1.46e-07,104;UBERON:0003076,8.09e-07,15;UBERON:0003057,8.09e-07,15 | |||
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| ||
|short_description=p5@CLIC6 | |short_description=p5@CLIC6 | ||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p5@CLIC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLIC6_5end |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | -405bp_to_ENST00000349499, ENST00000360731, NM_053277, uc002yuf.1, uc010gmt.1_5end |
EntrezGene: | CLIC6 |
HGNC: | 2065 |
UniProt: | Q96NY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.54e-66 | 3 |
visual pigment cell | 3.69e-50 | 4 |
pigment cell | 6.37e-15 | 14 |