FFCP PHASE1:Hg19::chr8:42038055..42038068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5327 | |EntrezGene=5327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9051 | |HGNC=9051 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=213bp_to_ENST00000522812_5end | |association_with_transcript=213bp_to_ENST00000522812_5end | ||
|cluster_id=chr8:42038055..42038068,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_3_at_PLAT_5end | |description=CAGE_peak_3_at_PLAT_5end | ||
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|ontology_enrichment_celltype=CL:0000183!4.66e-17!59;CL:0000192!3.15e-16!42;CL:0000514!3.15e-16!42;CL:0000187!8.72e-16!54;CL:0000680!1.34e-15!57;CL:0000056!1.34e-15!57;CL:0000355!1.34e-15!57;CL:0000055!2.15e-15!180;CL:0000222!3.27e-13!119;CL:0000393!5.11e-13!60;CL:0000211!5.11e-13!60;CL:0000359!1.59e-12!32;CL:0002539!2.65e-08!10;CL:0002334!7.60e-08!12;CL:0000220!1.39e-07!246;CL:0000057!1.84e-07!75;CL:0002321!2.30e-07!248;CL:0002494!6.22e-07!16 | |ontology_enrichment_celltype=CL:0000183!4.66e-17!59;CL:0000192!3.15e-16!42;CL:0000514!3.15e-16!42;CL:0000187!8.72e-16!54;CL:0000680!1.34e-15!57;CL:0000056!1.34e-15!57;CL:0000355!1.34e-15!57;CL:0000055!2.15e-15!180;CL:0000222!3.27e-13!119;CL:0000393!5.11e-13!60;CL:0000211!5.11e-13!60;CL:0000359!1.59e-12!32;CL:0002539!2.65e-08!10;CL:0002334!7.60e-08!12;CL:0000220!1.39e-07!246;CL:0000057!1.84e-07!75;CL:0002321!2.30e-07!248;CL:0002494!6.22e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002595;8.07e-13;5!CL:0000359;5.41e-12;32!CL:0000192;7.10e-12;43!CL:0002593;5.55e-09;2!CL:0002681;2.51e-07;12!CL:0002584;2.51e-07;12 | |ontology_enrichment_celltype_v019=CL:0002595;8.07e-13;5!CL:0000359;5.41e-12;32!CL:0000192;7.10e-12;43!CL:0002593;5.55e-09;2!CL:0002681;2.51e-07;12!CL:0002584;2.51e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.05e-16,43;CL:0000514,8.05e-16,43;CL:0000680,2.65e-14,58;CL:0000056,2.65e-14,58;CL:0000355,2.65e-14,58;CL:0000187,2.22e-13,55;CL:0002595,7.76e-13,5;CL:0000359,5.82e-12,32;CL:0000393,1.08e-11,61;CL:0000211,1.08e-11,61;CL:0000222,2.41e-11,121;CL:0002593,5.58e-09,2;CL:0002681,3.23e-07,12;CL:0002584,3.23e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;7.10e-12;43!CL:0000355;3.35e-08;58 | |ontology_enrichment_development_v019=CL:0000514;7.10e-12;43!CL:0000355;3.35e-08;58 | ||
|ontology_enrichment_disease=DOID:2394!3.22e-09!14 | |ontology_enrichment_disease=DOID:2394!3.22e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.31e-13;3!DOID:127;6.31e-13;3!DOID:0060072;8.66e-10;4!DOID:2394;7.74e-09;14 | |ontology_enrichment_disease_v019=DOID:0060084;6.31e-13;3!DOID:127;6.31e-13;3!DOID:0060072;8.66e-10;4!DOID:2394;7.74e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.47e-13,3;DOID:127,6.47e-13,3;DOID:0060072,8.83e-10,4;DOID:2394,6.02e-09,14 | |||
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| ||
|short_description=p3@PLAT | |short_description=p3@PLAT | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p3@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | 213bp_to_ENST00000522812_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.05e-16 | 43 |
smooth muscle myoblast | 8.05e-16 | 43 |
muscle precursor cell | 2.65e-14 | 58 |
myoblast | 2.65e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-14 | 58 |
muscle cell | 2.22e-13 | 55 |
smooth muscle cell of the subclavian artery | 7.76e-13 | 5 |
vascular associated smooth muscle cell | 5.82e-12 | 32 |
electrically responsive cell | 1.08e-11 | 61 |
electrically active cell | 1.08e-11 | 61 |
mesodermal cell | 2.41e-11 | 121 |
smooth muscle cell of the internal thoracic artery | 5.58e-09 | 2 |
kidney cortical cell | 3.23e-07 | 12 |
renal cortical epithelial cell | 3.23e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.47e-13 | 3 |
leiomyoma | 6.47e-13 | 3 |
benign neoplasm | 8.83e-10 | 4 |
ovarian cancer | 6.02e-09 | 14 |