FFCP PHASE1:Hg19::chr12:42877408..42877422,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17019 | |||
|TSSclassifier=strong | |||
|UniProt=B3KVG3,Q96MT3 | |||
|association_with_transcript=0bp_to_ENST00000552240,NM_001144881,uc010skv.1_5end | |||
|cluster_id=chr12:42877408..42877422,- | |||
|description=CAGE_peak_9_at_PRICKLE1_5end | |||
|id=chr12:42877408..42877422,- | |||
|ontology_enrichment_celltype=CL:0002139!1.01e-11!24;CL:0000071!1.53e-09!18;CL:0002546!1.53e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000650;4.87e-13;2!CL:1000500;4.87e-13;2!CL:1000618;4.87e-13;2!CL:1001318;4.87e-13;2!CL:0002173;4.87e-13;2!CL:0000236;6.76e-12;13!CL:0002144;2.86e-09;3!CL:1000746;2.67e-08;7!CL:1000612;2.67e-08;7!CL:0002681;3.26e-08;12!CL:0002584;3.26e-08;12!CL:0002616;8.51e-08;1!CL:0000669;6.06e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.46e-13,2;CL:1000500,8.46e-13,2;CL:1000618,8.46e-13,2;CL:1001318,8.46e-13,2;CL:0002173,8.46e-13,2;CL:0000236,4.04e-11,14;CL:0002144,1.98e-09,3;CL:1000746,3.91e-08,7;CL:1000612,3.91e-08,7;CL:0002681,4.28e-08,12;CL:0002584,4.28e-08,12;CL:0002616,8.00e-08,1;CL:0000669,7.95e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.34e-07;1!UBERON:0010226;2.34e-07;1!UBERON:0004140;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.53e-09!18;UBERON:0004638!1.53e-09!18;UBERON:0004852!1.53e-09!18;UBERON:0000487!1.27e-07!22;UBERON:0000477!1.96e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;4.87e-13;2!UBERON:0003838;4.87e-13;2!UBERON:0003586;4.87e-13;2!UBERON:0005169;4.87e-13;2!UBERON:0002321;4.87e-13;2!UBERON:0005215;4.87e-13;2!UBERON:0002303;4.87e-13;2!UBERON:0002319;4.87e-13;2!UBERON:0010523;2.86e-09;3!UBERON:0001915;2.86e-09;3!UBERON:0001982;2.86e-09;3!UBERON:0004151;5.49e-09;3!UBERON:0000074;2.67e-08;7!UBERON:0001229;2.67e-08;7!UBERON:0001225;3.26e-08;12!UBERON:0008987;3.26e-08;12!UBERON:0002084;2.34e-07;1!UBERON:0002079;2.34e-07;1!UBERON:0002082;2.34e-07;1!UBERON:0000489;5.92e-07;29!UBERON:0003891;6.06e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.46e-13,2;UBERON:0003838,8.46e-13,2;UBERON:0003586,8.46e-13,2;UBERON:0005169,8.46e-13,2;UBERON:0002321,8.46e-13,2;UBERON:0005215,8.46e-13,2;UBERON:0002303,8.46e-13,2;UBERON:0002319,8.46e-13,2;UBERON:0010523,1.98e-09,3;UBERON:0001915,1.98e-09,3;UBERON:0001982,1.98e-09,3;UBERON:0004151,4.68e-09,3;UBERON:0003887,3.67e-08,12;UBERON:0010532,3.91e-08,7;UBERON:0000074,3.91e-08,7;UBERON:0001229,3.91e-08,7;UBERON:0001230,3.91e-08,7;UBERON:0003220,3.91e-08,7;UBERON:0005749,3.91e-08,7;UBERON:0004199,3.91e-08,7;UBERON:0004209,3.91e-08,7;UBERON:0004198,3.91e-08,7;UBERON:0001225,4.28e-08,12;UBERON:0008987,4.28e-08,12;UBERON:0002079,1.83e-07,1;UBERON:0002084,2.35e-07,1;UBERON:0002082,2.35e-07,1;UBERON:0010226,2.35e-07,1;UBERON:0005103,3.57e-07,8;UBERON:0000083,3.57e-07,8;UBERON:0009201,3.57e-07,8;UBERON:0006553,3.57e-07,8;UBERON:0003074,3.57e-07,8;UBERON:0003060,3.57e-07,8;UBERON:0003103,4.15e-07,68;UBERON:0003891,7.95e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.940364164434263,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,2.66852776159066,1.28019066769952,1.60158394814405,2.87376219977242,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.378139268656271,0.443458794925128,0.614843499851882,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0.71153252537342,0.66944122552934,2.01414658554573,0,1.95249646038536,0.367663080345869,0,1.42879565254528,0.22452937262617,0.675668882899933,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,1.06400514659507,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0.612975591598039,0.751190294532984,0,0,0.427114777637135,0,0,0.103052529238439,0,0,0,0,0,0.368199594569197,0.646584227275248,0,0,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.464775771478074,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0,0.352226082707465,0.721832238805369,0.925971025153221,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.447792613514241,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,3.12022310734098,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0.308419387605311,1.06537035187876,1.31403449622095,0,0.813472649219715,0,0.40101294060657,0,0.114814448164607,0.546273504020151,0.917870904715969,0.451199612907412,0.308061348417659,0,0,0.316654886678627,1.13733384070897,0.340187410553031,0,0,1.35473218771926,1.00337954770971,0,0,1.34324852833307,0,0,0,0.984043937099117,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.712256285173899,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0,0.281338832821026,0.556543525114529,0,0,0,0.828851746593443,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.538651809526579,0.455768223388005,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0.60129367765797,0,0,0,0,0,0.284609546029793,0.832048038078832,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0.426905989478705,0.999048047910651,0,0,0.171594997861965,0,0,0,0.271808412147228,0.418411385249333,0.101998217636322,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,1.28767814440971,0.89268582976749,1.81395375714161,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0.825236619583403,0,0,0,0.242998226632099,0,0.157611414598396,1.10154635083496,0,2.15144807199414,0.191915197319445,1.42939065274673,1.32418394073086,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0.410462603746695,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0.427149650270779,0.78602152549833,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0.597019211547496,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0.829412415681711,0.53168342911599,0.521745061811734,0.150257608997218,0.380805212168795,0,0.363697318405119,0.214821114084977,0.928067519756987,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0.318004350653419,0.315446980005013,0,0,0.6124909547064,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,0.902523940191087,0,0,0,0.327543835020193,0.147856086217045,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.313972371402056,0,0,0.913158720509496,0,0,0.643288897589907,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0.31020638566432,0,0.111855431797792,0,0,0,0.205325613712494,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.245148321753905,0,0,0,1.6906229103336,0,0.375935671919414,1.61144719933943,0.0999411559249289,0,0,0.240724100067505,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0.918948995348449,0.250707539292375,0.378893491091197,0.267964130156178,0,0.20686599172379,0.213233981900981,2.14257988317366,0,0.124149428591716,0.33639558774184,1.59117895695412,0.202117188958219,0,0.342233301085281,0.404112318087525,0.286888821570705,0.665320713092027,0.0814032686109745,0,0,0.179650404213174,0,0.611207220914332,0.813792356631477,0,0.603821380773079,0 | |||
|short_description=p9@PRICKLE1 | |||
}} |
Latest revision as of 08:01, 18 September 2015
Short description: | p9@PRICKLE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRICKLE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000552240, NM_001144881, uc010skv.1_5end |
EntrezGene: | PRICKLE1 |
HGNC: | 17019 |
UniProt: | B3KVG3Q96MT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.46e-13 | 2 |
kidney interstitial cell | 8.46e-13 | 2 |
juxtaglomerular complex cell | 8.46e-13 | 2 |
renal interstitial pericyte | 8.46e-13 | 2 |
extraglomerular mesangial cell | 8.46e-13 | 2 |
B cell | 4.04e-11 | 14 |
capillary endothelial cell | 1.98e-09 | 3 |
glomerular cell | 3.91e-08 | 7 |
kidney corpuscule cell | 3.91e-08 | 7 |
kidney cortical cell | 4.28e-08 | 12 |
renal cortical epithelial cell | 4.28e-08 | 12 |
perirenal adipocyte cell | 8.00e-08 | 1 |
pericyte cell | 7.95e-07 | 4 |