FFCP PHASE1:Hg19::chr12:4382904..4382916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=894 | |EntrezGene=894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1583 | |HGNC=1583 | ||
|TSSclassifier=strong | |||
|UniProt=P30279 | |UniProt=P30279 | ||
|association_with_transcript=2bp_to_NM_001759,uc001qmo.2_5end | |association_with_transcript=2bp_to_NM_001759,uc001qmo.2_5end | ||
|cluster_id=chr12:4382904..4382916,+ | |||
|coexpression_cluster_id=C539 | |coexpression_cluster_id=C539 | ||
|description=CAGE_peak_4_at_CCND2_5end | |description=CAGE_peak_4_at_CCND2_5end | ||
|id=chr12:4382904..4382916,+ | |id=chr12:4382904..4382916,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-13!115;UBERON:0001869!7.18e-12!32;UBERON:0001893!1.36e-11!34;UBERON:0002780!1.42e-11!41;UBERON:0001890!1.42e-11!41;UBERON:0006240!1.42e-11!41;UBERON:0003080!1.60e-11!42;UBERON:0002020!3.52e-11!34;UBERON:0003528!3.52e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0002619!1.04e-10!22;UBERON:0000956!1.07e-10!25;UBERON:0000203!1.07e-10!25;UBERON:0001049!2.15e-10!57;UBERON:0005068!2.15e-10!57;UBERON:0006241!2.15e-10!57;UBERON:0007135!2.15e-10!57;UBERON:0001950!5.98e-10!20;UBERON:0001017!8.81e-10!82;UBERON:0002616!2.37e-09!59;UBERON:0005743!4.11e-09!86;UBERON:0003056!1.94e-08!61;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0000955!3.83e-07!69;UBERON:0006238!3.83e-07!69;UBERON:0000073!4.99e-07!94;UBERON:0001016!4.99e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!2.56e-13!115;UBERON:0001869!7.18e-12!32;UBERON:0001893!1.36e-11!34;UBERON:0002780!1.42e-11!41;UBERON:0001890!1.42e-11!41;UBERON:0006240!1.42e-11!41;UBERON:0003080!1.60e-11!42;UBERON:0002020!3.52e-11!34;UBERON:0003528!3.52e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0002619!1.04e-10!22;UBERON:0000956!1.07e-10!25;UBERON:0000203!1.07e-10!25;UBERON:0001049!2.15e-10!57;UBERON:0005068!2.15e-10!57;UBERON:0006241!2.15e-10!57;UBERON:0007135!2.15e-10!57;UBERON:0001950!5.98e-10!20;UBERON:0001017!8.81e-10!82;UBERON:0002616!2.37e-09!59;UBERON:0005743!4.11e-09!86;UBERON:0003056!1.94e-08!61;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0000955!3.83e-07!69;UBERON:0006238!3.83e-07!69;UBERON:0000073!4.99e-07!94;UBERON:0001016!4.99e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.83e-11;32!UBERON:0002619;4.74e-11;22!UBERON:0000956;4.98e-11;25!UBERON:0000203;4.98e-11;25!UBERON:0001893;9.63e-11;34!UBERON:0002791;1.20e-10;32!UBERON:0001950;2.92e-10;20!UBERON:0003528;3.09e-10;34!UBERON:0002020;3.09e-10;34!UBERON:0002780;6.81e-09;41!UBERON:0001890;6.81e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.80e-13,114;UBERON:0001869,2.76e-12,32;UBERON:0001893,5.35e-12,34;UBERON:0002780,5.62e-12,41;UBERON:0001890,5.62e-12,41;UBERON:0003080,5.62e-12,41;UBERON:0006240,5.62e-12,41;UBERON:0002791,1.21e-11,32;UBERON:0003528,1.44e-11,34;UBERON:0002020,1.44e-11,34;UBERON:0002619,4.45e-11,22;UBERON:0000956,4.59e-11,25;UBERON:0000203,4.59e-11,25;UBERON:0001049,1.18e-10,56;UBERON:0005068,1.18e-10,56;UBERON:0006241,1.18e-10,56;UBERON:0007135,1.18e-10,56;UBERON:0000073,2.01e-10,53;UBERON:0002616,2.01e-10,53;UBERON:0001950,2.75e-10,20;UBERON:0001017,3.98e-10,81;UBERON:0010371,3.57e-09,104;UBERON:0003056,2.78e-08,61;UBERON:0003075,5.63e-08,82;UBERON:0007284,5.63e-08,82;UBERON:0001016,7.35e-08,89;UBERON:0000955,2.24e-07,68;UBERON:0006238,2.24e-07,68;UBERON:0002346,4.60e-07,86 | |||
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| ||
|short_description=p4@CCND2 | |short_description=p4@CCND2 | ||
}} | }} |
Latest revision as of 08:31, 18 September 2015
Short description: | p4@CCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCND2_5end |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | 2bp_to_NM_001759, uc001qmo.2_5end |
EntrezGene: | CCND2 |
HGNC: | 1583 |
UniProt: | P30279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.80e-13 | 114 |
cerebral hemisphere | 2.76e-12 | 32 |
telencephalon | 5.35e-12 | 34 |
regional part of forebrain | 5.62e-12 | 41 |
forebrain | 5.62e-12 | 41 |
anterior neural tube | 5.62e-12 | 41 |
future forebrain | 5.62e-12 | 41 |
regional part of telencephalon | 1.21e-11 | 32 |
brain grey matter | 1.44e-11 | 34 |
gray matter | 1.44e-11 | 34 |
regional part of cerebral cortex | 4.45e-11 | 22 |
cerebral cortex | 4.59e-11 | 25 |
pallium | 4.59e-11 | 25 |
neural tube | 1.18e-10 | 56 |
neural rod | 1.18e-10 | 56 |
future spinal cord | 1.18e-10 | 56 |
neural keel | 1.18e-10 | 56 |
regional part of nervous system | 2.01e-10 | 53 |
regional part of brain | 2.01e-10 | 53 |
neocortex | 2.75e-10 | 20 |
central nervous system | 3.98e-10 | 81 |
ecto-epithelium | 3.57e-09 | 104 |
pre-chordal neural plate | 2.78e-08 | 61 |
neural plate | 5.63e-08 | 82 |
presumptive neural plate | 5.63e-08 | 82 |
nervous system | 7.35e-08 | 89 |
brain | 2.24e-07 | 68 |
future brain | 2.24e-07 | 68 |
neurectoderm | 4.60e-07 | 86 |