FFCP PHASE1:Hg19::chr3:45266648..45266677,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30293 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WZ71 | |||
|association_with_transcript=391bp_to_AL080235_5end | |||
|cluster_id=chr3:45266648..45266677,- | |||
|coexpression_cluster_id=C4330 | |||
|description=CAGE_peak_3_at_TMEM158_5end | |||
|id=chr3:45266648..45266677,- | |||
|ontology_enrichment_celltype=CL:0000393!4.76e-14!60;CL:0000211!4.76e-14!60;CL:0000055!7.38e-14!180;CL:0000680!1.04e-11!57;CL:0000056!1.04e-11!57;CL:0000355!1.04e-11!57;CL:0000187!8.55e-11!54;CL:0000192!9.72e-11!42;CL:0000514!9.72e-11!42;CL:0000183!1.07e-09!59;CL:0000359!6.63e-09!32;CL:0000047!1.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-19;32!CL:0002595;1.47e-16;5!CL:0000192;2.22e-15;43!CL:0000393;5.17e-10;61!CL:0000211;5.17e-10;61!CL:0002582;8.06e-10;3!CL:0000187;9.66e-09;55!CL:0002593;8.47e-08;2!CL:0000047;2.44e-07;2!CL:0002596;4.24e-07;2!CL:0002594;4.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.35e-21,32;CL:0000192,6.99e-21,43;CL:0000514,6.99e-21,43;CL:0000393,3.11e-20,61;CL:0000211,3.11e-20,61;CL:0000187,5.96e-19,55;CL:0000680,1.11e-17,58;CL:0000056,1.11e-17,58;CL:0000355,1.11e-17,58;CL:0002595,1.68e-16,5;CL:0002582,3.91e-10,3;CL:0000222,2.72e-08,121;CL:0002593,8.37e-08,2;CL:0002594,3.03e-07,4;CL:0002596,3.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.22e-15;43!CL:0000355;4.52e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.21e-10;3!DOID:127;1.21e-10;3!DOID:0060072;4.62e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.13e-10,3;DOID:127,1.13e-10,3;DOID:0060072,4.38e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.33e-14!70;UBERON:0000914!9.83e-13!83;UBERON:0002329!9.83e-13!83;UBERON:0003077!9.83e-13!83;UBERON:0003059!9.83e-13!83;UBERON:0007282!9.83e-13!83;UBERON:0009618!9.83e-13!83;UBERON:0007285!9.83e-13!83;UBERON:0000486!5.98e-11!82;UBERON:0001134!9.88e-11!61;UBERON:0002036!9.88e-11!61;UBERON:0003082!9.88e-11!61;UBERON:0002385!5.22e-10!63;UBERON:0001015!5.22e-10!63;UBERON:0000383!5.22e-10!63;UBERON:0001637!8.73e-10!42;UBERON:0003509!8.73e-10!42;UBERON:0004572!8.73e-10!42;UBERON:0005256!3.39e-08!143;UBERON:0004573!8.65e-08!33;UBERON:0004571!8.65e-08!33;UBERON:0004872!1.69e-07!84;UBERON:0002100!2.76e-07!216;UBERON:0000922!8.84e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.47e-16;5!UBERON:0001533;1.47e-16;5!UBERON:0003513;1.06e-11;7!UBERON:0004573;7.55e-10;33!UBERON:0004571;7.55e-10;33!UBERON:0001637;1.50e-09;42!UBERON:0003509;1.50e-09;42!UBERON:0004572;1.50e-09;42!UBERON:0002456;8.47e-08;2!UBERON:0005396;4.24e-07;2!UBERON:0001310;4.41e-07;4!UBERON:0002119;4.41e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.81e-20,71;UBERON:0003059,1.81e-20,71;UBERON:0007282,1.81e-20,71;UBERON:0004290,1.81e-20,71;UBERON:0009618,1.81e-20,71;UBERON:0003077,4.32e-20,72;UBERON:0007285,4.32e-20,72;UBERON:0007524,1.01e-19,73;UBERON:0007503,5.00e-18,78;UBERON:0000486,1.54e-16,83;UBERON:0003834,1.68e-16,5;UBERON:0001533,1.68e-16,5;UBERON:0001134,3.49e-16,62;UBERON:0002036,3.49e-16,62;UBERON:0003082,3.49e-16,62;UBERON:0002385,1.66e-15,64;UBERON:0001015,1.66e-15,64;UBERON:0000383,1.66e-15,64;UBERON:0001637,5.95e-15,42;UBERON:0003509,5.95e-15,42;UBERON:0004572,5.95e-15,42;UBERON:0005256,2.98e-12,122;UBERON:0003513,1.16e-11,7;UBERON:0004573,3.42e-11,33;UBERON:0004571,3.42e-11,33;UBERON:0007500,7.28e-11,59;UBERON:0001981,7.28e-11,59;UBERON:0004537,7.28e-11,59;UBERON:0006965,7.28e-11,59;UBERON:0000490,1.11e-10,148;UBERON:0000055,6.95e-09,68;UBERON:0004872,1.40e-08,83;UBERON:0003104,1.84e-08,160;UBERON:0009142,1.84e-08,160;UBERON:0002456,8.37e-08,2;UBERON:0001310,3.03e-07,4;UBERON:0002049,3.06e-07,78;UBERON:0007798,3.06e-07,78;UBERON:0005396,3.55e-07,2;UBERON:0002119,4.78e-07,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.26858963686374,0,0.446961094427288,0,0,4.42203911398782,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,1.89853131913626,0,0,0,0,0,0.633152558322899,0,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,8.42832207441865,0,4.48346041655403,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.975789649036763,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,1.09493207722749,4.69348596989448,0.643240938192885,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,2.41151501647669,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,3.04913549066956,2.60279707715243,1.54657762555539,0.670065061337395,1.91381625495949,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0,2.10662269809403,4.5481500811197,0,0,0.368738337083406,1.30325421702124,0.391602314925481,0,0,0.215714200818617,0,0,1.66435439510497,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.771048469013278,2.13074070375753,1.97105174433142,4.67328986265259,2.78904908303902,0,0.601519410909855,0.0920809889358963,1.03333003348146,0.546273504020151,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0.574265537996172,0,3.21367859688319,1.93341436584244,0.154048617114644,0.460511024178389,0,0.429680979473094,0,0,0.0890320356467374,0.330569830721956,0,0,0,0.929691098594572,0,2.7881490806424,0.924100740528266,1.06461206063404,6.95946393660058,18.7177461294959,0.572499546967965,0,0,0,0.511795582622668,0,6.0458617105928,1.56989728039846,0.179872457583315,0,0.117812402345686,2.42618977887979,0,0,0,9.01739911635752,8.45201174054043,0.136499911407986,1.97967604735198,1.13008116620243,2.2054613741845,5.97095077717098,7.89211593456773,2.31510213706675,0,2.43492452355245,1.54911749049875,0,0,0,1.78335525740625,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,2.00355669041231,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.197286811273867,2.3948309234694,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0.461701551022782,0.227884111694002,0,0,0.108647371922008,0,1.37396390102793,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0.123563938946503,0,0.202203398942031,0,0.234264445725339,0,0,0.485560759068186,0,0,1.22429104652196,0,0.300646838828985,0,1.32930774541437,0.661983911750998,0,0,0,0.416024019039416,0,0,0,0.34945333648406,1.0319161948297,0,0,0.0821154570532092,0.484945082442097,0,0,0.959293472527256,0.794858446811959,0.189932387867636,0,0,0.426905989478705,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.687697182986169,0.415440338029185,0,0,1.09349201984444,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,24.4349820789171,2.5926644736038,14.6964312049234,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0.303298235083296,1.42732666772484,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.757612021100357,0.251567901752575,0.889811221596536,0.686520205190771,0.756154618816195,0,0.591420599958536,1.11507737014592,2.24901556081802,0.310525913752519,1.65882483136342,0,2.60872530905867,0.150257608997218,0.761610424337591,0,0.545545977607678,0.322231671127465,0,0.796191777397232,0,0,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0.159633859057151,0.205116364240755,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.253663240775627,1.09394961803644,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0.328863867814245,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0.828324005113957,1.10777426186905,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.45178432815584,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.580120991762195,0,0,0.352894871715692,0,0,0,0,0,0.475940431336403,1.30905207102113,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0,0,0,0.378893491091197,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0,0,0,0.320182037633146,0,0.179650404213174,0,2.2003459952916,0,0,0,0 | |||
|short_description=p3@TMEM158 | |||
}} |
Latest revision as of 08:54, 18 September 2015
Short description: | p3@TMEM158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM158_5end |
Coexpression cluster: | C4330_leiomyoma_Smooth_Fibroblast_Preadipocyte_Mesenchymal_mesenchymal_Adipocyte |
Association with transcript: | 391bp_to_AL080235_5end |
EntrezGene: | TMEM158 |
HGNC: | 30293 |
UniProt: | Q8WZ71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.35e-21 | 32 |
smooth muscle cell | 6.99e-21 | 43 |
smooth muscle myoblast | 6.99e-21 | 43 |
electrically responsive cell | 3.11e-20 | 61 |
electrically active cell | 3.11e-20 | 61 |
muscle cell | 5.96e-19 | 55 |
muscle precursor cell | 1.11e-17 | 58 |
myoblast | 1.11e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-17 | 58 |
smooth muscle cell of the subclavian artery | 1.68e-16 | 5 |
visceral preadipocyte | 3.91e-10 | 3 |
mesodermal cell | 2.72e-08 | 121 |
smooth muscle cell of the internal thoracic artery | 8.37e-08 | 2 |
smooth muscle cell of the umbilical artery | 3.03e-07 | 4 |
smooth muscle cell of the carotid artery | 3.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.13e-10 | 3 |
leiomyoma | 1.13e-10 | 3 |
benign neoplasm | 4.38e-08 | 4 |