FFCP PHASE1:Hg19::chr10:53459319..53459386,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:53459319..53459386,-
|short_description=p1@CSTF2T
|description=CAGE_peak_1_at_CSTF2T_5end
|association_with_transcript=0bp_to_ENST00000331173,NM_015235,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23283 | |EntrezGene=23283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17086 | |HGNC=17086 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0L4 | |UniProt=Q9H0L4 | ||
|association_with_transcript=0bp_to_ENST00000331173,NM_015235,uc001jjp.2_5end | |||
|cluster_id=chr10:53459319..53459386,- | |||
|description=CAGE_peak_1_at_CSTF2T_5end | |||
|id=chr10:53459319..53459386,- | |||
|ontology_enrichment_celltype=CL:0000542!3.95e-08!53;CL:0000051!3.95e-08!53;CL:0000838!4.37e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.95e-08,53;CL:0000051,3.95e-08,53;CL:0000838,4.37e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.25e-21!115;UBERON:0000073!1.14e-16!94;UBERON:0001016!1.14e-16!94;UBERON:0005743!1.78e-16!86;UBERON:0001017!7.43e-16!82;UBERON:0001049!4.43e-15!57;UBERON:0005068!4.43e-15!57;UBERON:0006241!4.43e-15!57;UBERON:0007135!4.43e-15!57;UBERON:0002616!1.23e-12!59;UBERON:0000955!9.66e-12!69;UBERON:0006238!9.66e-12!69;UBERON:0003080!2.31e-11!42;UBERON:0002780!3.10e-11!41;UBERON:0001890!3.10e-11!41;UBERON:0006240!3.10e-11!41;UBERON:0003075!8.85e-11!86;UBERON:0007284!8.85e-11!86;UBERON:0001893!2.93e-10!34;UBERON:0002346!3.37e-10!90;UBERON:0002020!9.42e-10!34;UBERON:0003528!9.42e-10!34;UBERON:0002791!9.97e-10!33;UBERON:0001869!3.52e-09!32;UBERON:0003056!2.18e-08!61;UBERON:0000956!2.17e-07!25;UBERON:0000203!2.17e-07!25;UBERON:0001950!2.53e-07!20;UBERON:0002619!4.85e-07!22;UBERON:0000153!6.65e-07!129;UBERON:0007811!6.65e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.23e-09;34!UBERON:0000073;1.08e-08;53!UBERON:0002616;1.08e-08;53!UBERON:0003528;2.45e-08;34!UBERON:0002020;2.45e-08;34!UBERON:0002780;2.85e-08;41!UBERON:0001890;2.85e-08;41!UBERON:0001869;3.04e-08;32!UBERON:0002791;3.61e-08;32!UBERON:0000956;2.31e-07;25!UBERON:0000203;2.31e-07;25!UBERON:0001950;2.78e-07;20!UBERON:0002619;5.25e-07;22!UBERON:0001017;5.62e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-20,114;UBERON:0001016,6.99e-16,89;UBERON:0001017,1.05e-15,81;UBERON:0001049,6.01e-15,56;UBERON:0005068,6.01e-15,56;UBERON:0006241,6.01e-15,56;UBERON:0007135,6.01e-15,56;UBERON:0000073,9.85e-14,53;UBERON:0002616,9.85e-14,53;UBERON:0003075,5.01e-12,82;UBERON:0007284,5.01e-12,82;UBERON:0000955,1.35e-11,68;UBERON:0006238,1.35e-11,68;UBERON:0002346,2.34e-11,86;UBERON:0002780,3.10e-11,41;UBERON:0001890,3.10e-11,41;UBERON:0003080,3.10e-11,41;UBERON:0006240,3.10e-11,41;UBERON:0001893,2.93e-10,34;UBERON:0003528,9.42e-10,34;UBERON:0002020,9.42e-10,34;UBERON:0001869,3.52e-09,32;UBERON:0002791,3.76e-09,32;UBERON:0003056,1.24e-08,61;UBERON:0000956,2.17e-07,25;UBERON:0000203,2.17e-07,25;UBERON:0001950,2.53e-07,20;UBERON:0010371,3.05e-07,104;UBERON:0002619,4.85e-07,22 | |||
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| ||
|short_description=p1@CSTF2T | |||
}} | }} |
Latest revision as of 11:49, 18 September 2015
Short description: | p1@CSTF2T |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSTF2T_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331173, NM_015235, uc001jjp.2_5end |
EntrezGene: | CSTF2T |
HGNC: | 17086 |
UniProt: | Q9H0L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.95e-08 | 53 |
common lymphoid progenitor | 3.95e-08 | 53 |
lymphoid lineage restricted progenitor cell | 4.37e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.03e-20 | 114 |
nervous system | 6.99e-16 | 89 |
central nervous system | 1.05e-15 | 81 |
neural tube | 6.01e-15 | 56 |
neural rod | 6.01e-15 | 56 |
future spinal cord | 6.01e-15 | 56 |
neural keel | 6.01e-15 | 56 |
regional part of nervous system | 9.85e-14 | 53 |
regional part of brain | 9.85e-14 | 53 |
neural plate | 5.01e-12 | 82 |
presumptive neural plate | 5.01e-12 | 82 |
brain | 1.35e-11 | 68 |
future brain | 1.35e-11 | 68 |
neurectoderm | 2.34e-11 | 86 |
regional part of forebrain | 3.10e-11 | 41 |
forebrain | 3.10e-11 | 41 |
anterior neural tube | 3.10e-11 | 41 |
future forebrain | 3.10e-11 | 41 |
telencephalon | 2.93e-10 | 34 |
brain grey matter | 9.42e-10 | 34 |
gray matter | 9.42e-10 | 34 |
cerebral hemisphere | 3.52e-09 | 32 |
regional part of telencephalon | 3.76e-09 | 32 |
pre-chordal neural plate | 1.24e-08 | 61 |
cerebral cortex | 2.17e-07 | 25 |
pallium | 2.17e-07 | 25 |
neocortex | 2.53e-07 | 20 |
ecto-epithelium | 3.05e-07 | 104 |
regional part of cerebral cortex | 4.85e-07 | 22 |