FFCP PHASE1:Hg19::chr4:74124532..74124571,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:74124532..74124571,-
|short_description=p2@ANKRD17
|description=CAGE_peak_2_at_ANKRD17_5end
|association_with_transcript=-17bp_to_ENST00000330838,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26057 | |EntrezGene=26057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23575 | |HGNC=23575 | ||
|TSSclassifier=strong | |||
|UniProt=G5E964 | |UniProt=G5E964 | ||
|association_with_transcript=-17bp_to_ENST00000330838,ENST00000561029_5end | |||
|cluster_id=chr4:74124532..74124571,- | |||
|description=CAGE_peak_2_at_ANKRD17_5end | |||
|id=chr4:74124532..74124571,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-27!115;UBERON:0001049!1.52e-13!57;UBERON:0005068!1.52e-13!57;UBERON:0006241!1.52e-13!57;UBERON:0007135!1.52e-13!57;UBERON:0002780!1.58e-13!41;UBERON:0001890!1.58e-13!41;UBERON:0006240!1.58e-13!41;UBERON:0002616!4.83e-13!59;UBERON:0003080!1.71e-12!42;UBERON:0001893!1.51e-11!34;UBERON:0002020!3.02e-11!34;UBERON:0003528!3.02e-11!34;UBERON:0000955!3.21e-11!69;UBERON:0006238!3.21e-11!69;UBERON:0002791!4.47e-11!33;UBERON:0001869!1.54e-10!32;UBERON:0001017!2.08e-10!82;UBERON:0005743!2.99e-09!86;UBERON:0002346!7.43e-09!90;UBERON:0003075!9.41e-09!86;UBERON:0007284!9.41e-09!86;UBERON:0000073!9.67e-09!94;UBERON:0001016!9.67e-09!94;UBERON:0002619!2.22e-08!22;UBERON:0000956!6.01e-08!25;UBERON:0000203!6.01e-08!25;UBERON:0000153!7.50e-08!129;UBERON:0007811!7.50e-08!129;UBERON:0001950!2.17e-07!20;UBERON:0000033!3.11e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.73e-10;41!UBERON:0001890;3.73e-10;41!UBERON:0001893;4.88e-10;34!UBERON:0003528;9.85e-10;34!UBERON:0002020;9.85e-10;34!UBERON:0002791;1.48e-09;32!UBERON:0001869;1.78e-09;32!UBERON:0000073;1.91e-09;53!UBERON:0002616;1.91e-09;53!UBERON:0002619;2.05e-08;22!UBERON:0007023;3.81e-08;114!UBERON:0000956;5.95e-08;25!UBERON:0000203;5.95e-08;25!UBERON:0001950;2.07e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.58e-26,114;UBERON:0001049,1.89e-14,56;UBERON:0005068,1.89e-14,56;UBERON:0006241,1.89e-14,56;UBERON:0007135,1.89e-14,56;UBERON:0000073,2.98e-14,53;UBERON:0002616,2.98e-14,53;UBERON:0002780,1.58e-13,41;UBERON:0001890,1.58e-13,41;UBERON:0003080,1.58e-13,41;UBERON:0006240,1.58e-13,41;UBERON:0000955,6.30e-12,68;UBERON:0006238,6.30e-12,68;UBERON:0001893,1.51e-11,34;UBERON:0003528,3.02e-11,34;UBERON:0002020,3.02e-11,34;UBERON:0001017,5.10e-11,81;UBERON:0002791,1.41e-10,32;UBERON:0001869,1.54e-10,32;UBERON:0001016,2.48e-10,89;UBERON:0002346,6.26e-09,86;UBERON:0003075,7.77e-09,82;UBERON:0007284,7.77e-09,82;UBERON:0002619,2.22e-08,22;UBERON:0000956,6.01e-08,25;UBERON:0000203,6.01e-08,25;UBERON:0003056,1.54e-07,61;UBERON:0001950,2.17e-07,20 | |||
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1527759 | ||
|short_description=p2@ANKRD17 | |||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p2@ANKRD17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ANKRD17_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000330838, ENST00000561029_5end |
EntrezGene: | ANKRD17 |
HGNC: | 23575 |
UniProt: | G5E964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.58e-26 | 114 |
neural tube | 1.89e-14 | 56 |
neural rod | 1.89e-14 | 56 |
future spinal cord | 1.89e-14 | 56 |
neural keel | 1.89e-14 | 56 |
regional part of nervous system | 2.98e-14 | 53 |
regional part of brain | 2.98e-14 | 53 |
regional part of forebrain | 1.58e-13 | 41 |
forebrain | 1.58e-13 | 41 |
anterior neural tube | 1.58e-13 | 41 |
future forebrain | 1.58e-13 | 41 |
brain | 6.30e-12 | 68 |
future brain | 6.30e-12 | 68 |
telencephalon | 1.51e-11 | 34 |
brain grey matter | 3.02e-11 | 34 |
gray matter | 3.02e-11 | 34 |
central nervous system | 5.10e-11 | 81 |
regional part of telencephalon | 1.41e-10 | 32 |
cerebral hemisphere | 1.54e-10 | 32 |
nervous system | 2.48e-10 | 89 |
neurectoderm | 6.26e-09 | 86 |
neural plate | 7.77e-09 | 82 |
presumptive neural plate | 7.77e-09 | 82 |
regional part of cerebral cortex | 2.22e-08 | 22 |
cerebral cortex | 6.01e-08 | 25 |
pallium | 6.01e-08 | 25 |
pre-chordal neural plate | 1.54e-07 | 61 |
neocortex | 2.17e-07 | 20 |