FFCP PHASE1:Hg19::chr3:47484661..47484686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22937 | |EntrezGene=22937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30634 | |HGNC=30634 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDQ1 | |UniProt=F8WDQ1 | ||
|association_with_transcript=-77bp_to_ENST00000420588,ENST00000485967_5end | |association_with_transcript=-77bp_to_ENST00000420588,ENST00000485967_5end | ||
|cluster_id=chr3:47484661..47484686,- | |||
|coexpression_cluster_id=C235 | |coexpression_cluster_id=C235 | ||
|description=CAGE_peak_4_at_SCAP_5end | |description=CAGE_peak_4_at_SCAP_5end | ||
|id=chr3:47484661..47484686,- | |id=chr3:47484661..47484686,- | ||
|ontology_enrichment_celltype=CL:0000181!2.56e-07!12;CL:0000417!2.56e-07!12;CL:0000668!2.56e-07!12;CL:0000414!2.56e-07!12;CL:0000412!2.56e-07!12;CL:0000182!2.56e-07!12 | |ontology_enrichment_celltype=CL:0000181!2.56e-07!12;CL:0000417!2.56e-07!12;CL:0000668!2.56e-07!12;CL:0000414!2.56e-07!12;CL:0000412!2.56e-07!12;CL:0000182!2.56e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.14e-25;12!CL:0002623;7.62e-13;3!CL:0002563;5.55e-10;4!CL:0000622;4.69e-08;5!CL:0002251;2.35e-07;20!CL:0000154;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-25,12;CL:0000223,1.49e-16,58;CL:0002623,8.84e-13,3;CL:0002563,5.55e-10,4;CL:0000622,5.12e-08,5;CL:0002251,2.45e-07,20;CL:0000154,8.15e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.92e-28;11!UBERON:0009497;1.52e-23;13!UBERON:0003104;1.05e-21;31!CL:0000223;2.83e-10;58!UBERON:0008425;3.88e-10;1!UBERON:0001041;5.72e-10;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002365;1.61e-37;31!UBERON:0002330;1.61e-37;31!UBERON:0002107;2.86e-35;19!UBERON:0006925;2.86e-35;19!UBERON:0002423;1.58e-26;25!UBERON:0002368;5.12e-18;33!UBERON:0000949;5.00e-13;43!UBERON:0002530;6.02e-13;57!UBERON:0001389;2.59e-10;1!UBERON:0000026;2.59e-10;1!UBERON:0008784;2.59e-10;1!UBERON:0006058;2.59e-10;1!UBERON:0003663;2.59e-10;1!UBERON:0004256;2.59e-10;1!UBERON:0004708;2.59e-10;1!UBERON:0002101;2.59e-10;1!UBERON:0004709;2.59e-10;1!UBERON:0002529;2.59e-10;1!UBERON:0010538;2.59e-10;1!UBERON:0003661;2.59e-10;1!UBERON:0010890;2.59e-10;1!UBERON:0002471;2.59e-10;1!UBERON:0001383;2.59e-10;1!UBERON:0010758;2.59e-10;1!UBERON:0010707;2.59e-10;1!UBERON:0000978;2.59e-10;1!UBERON:0002103;2.59e-10;1!UBERON:0001665;2.59e-10;1!UBERON:0003823;2.59e-10;1!UBERON:0000154;2.59e-10;1!UBERON:0010709;2.59e-10;1!UBERON:0001242;5.55e-10;4!UBERON:0001262;5.55e-10;4!UBERON:0004786;5.55e-10;4!UBERON:0004808;5.55e-10;4!UBERON:0001277;5.55e-10;4!UBERON:0001882;7.54e-10;1!UBERON:0005403;7.54e-10;1!UBERON:0001007;1.80e-09;81!UBERON:0002417;4.41e-08;58!UBERON:0000916;4.41e-08;58!UBERON:0005172;6.80e-08;52!UBERON:0005173;6.80e-08;52!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6 | |||
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|short_description=p4@SCAP | |short_description=p4@SCAP | ||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p4@SCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCAP_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | -77bp_to_ENST00000420588, ENST00000485967_5end |
EntrezGene: | SCAP |
HGNC: | 30634 |
UniProt: | F8WDQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.43e-25 | 12 |
endodermal cell | 1.49e-16 | 58 |
acinar cell of salivary gland | 8.84e-13 | 3 |
intestinal epithelial cell | 5.55e-10 | 4 |
acinar cell | 5.12e-08 | 5 |
epithelial cell of alimentary canal | 2.45e-07 | 20 |
protein secreting cell | 8.15e-07 | 6 |