FFCP PHASE1:Hg19::chr12:48152774..48152816,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:48152774..48152816,+ to FFCP PHASE1:Hg19::chr12:48152774..48152816,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55652 | |EntrezGene=55652 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26035 | |HGNC=26035 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1R8 | |UniProt=F8W1R8 | ||
|association_with_transcript=0bp_to_ENST00000549243_5end | |||
|cluster_id=chr12:48152774..48152816,+ | |||
|description=CAGE_peak_2_at_SLC48A1_5end | |||
|id=chr12:48152774..48152816,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;7.22e-08;6!CL:0002255;7.22e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.73e-08,6;CL:0002255,3.73e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;7.22e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.73e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000062!7.47e-16!511;UBERON:0000064!9.13e-14!219;UBERON:0007023!9.02e-13!115;UBERON:0000475!1.36e-12!365;UBERON:0000468!1.18e-11!659;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0000467!3.79e-11!625;UBERON:0000480!6.30e-11!626;UBERON:0002346!1.15e-10!90;UBERON:0000481!1.84e-10!347;UBERON:0003075!2.81e-10!86;UBERON:0007284!2.81e-10!86;UBERON:0000924!1.03e-09!173;UBERON:0006601!1.03e-09!173;UBERON:0003080!1.69e-09!42;UBERON:0004121!2.53e-09!169;UBERON:0000955!2.88e-09!69;UBERON:0006238!2.88e-09!69;UBERON:0002780!4.19e-09!41;UBERON:0001890!4.19e-09!41;UBERON:0006240!4.19e-09!41;UBERON:0002616!5.23e-09!59;UBERON:0000073!1.67e-08!94;UBERON:0001016!1.67e-08!94;UBERON:0005743!1.73e-08!86;UBERON:0002020!2.37e-08!34;UBERON:0003528!2.37e-08!34;UBERON:0000033!2.53e-08!123;UBERON:0001893!3.46e-08!34;UBERON:0002791!4.49e-08!33;UBERON:0001017!4.62e-08!82;UBERON:0000153!5.28e-08!129;UBERON:0007811!5.28e-08!129;UBERON:0003056!5.30e-08!61;UBERON:0000922!2.39e-07!612;UBERON:0001869!3.51e-07!32;UBERON:0002050!7.85e-07!605;UBERON:0005423!7.85e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-11,56;UBERON:0005068,1.14e-11,56;UBERON:0006241,1.14e-11,56;UBERON:0007135,1.14e-11,56;UBERON:0000073,1.26e-10,53;UBERON:0002616,1.26e-10,53;UBERON:0002346,1.68e-09,86;UBERON:0003075,4.64e-09,82;UBERON:0007284,4.64e-09,82;UBERON:0005795,5.16e-09,22;UBERON:0002780,7.00e-09,41;UBERON:0001890,7.00e-09,41;UBERON:0003080,7.00e-09,41;UBERON:0006240,7.00e-09,41;UBERON:0010371,1.23e-08,104;UBERON:0000955,1.28e-08,68;UBERON:0006238,1.28e-08,68;UBERON:0007023,3.17e-08,114;UBERON:0000995,3.28e-08,21;UBERON:0003528,4.77e-08,34;UBERON:0002020,4.77e-08,34;UBERON:0003975,1.13e-07,22;UBERON:0004175,1.56e-07,25;UBERON:0001017,2.45e-07,81;UBERON:0001893,3.10e-07,34;UBERON:0001016,6.95e-07,89;UBERON:0002791,7.46e-07,32 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0.436882744260345,0.263766978228454,0.247532705920093,1.32558950291166,1.34465029290355,1.20538905604795,0,0,1.23121058076788,1.63200552995402,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0,2.10844143144775,0.739508020333575,0,0,0.293600439334847,0,0,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,2.1686349143074,0.50133791063589,1.15877215168659,0,0.973269740605272,0.0945348171640679,0,0.087834785693126,1.17881167947941,1.45718115317017,1.11235332835329,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.759783069987479,0.264818361626438,1.14734648299525,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.908144565869588,0,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,0.469737994575059,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.309977343527296,0,0.494533858557114,0.910161361938026,1.43723628363248,0.673344455816265,0.125118519871964,0.554128230968366,0,0,0.600952235626387,0.340296549480063,0.717558542755448,2.98980344345994,0.847727604638247,0.600182192168805,1.13357782162283,1.28820270022815,1.30281799432113,0.168776332241266,0.487185025805993,0.504867548488229,1.19664868234989,2.10139873864455,1.77504796258307,0.201504196455281,0.508681776931463,0.57978255948989,0.545492241181669,0.573609190778008,0.487894824518382,0.397589304964456,0.69716365721711,0.10366105501537,0.252320850875628,0,0,1.28648187638577,4.14404764057442,0.464367928031979,0.721879481669586,0.828147600278907,0.842923450390509,0.482022059766964,0.661763836394364,0.871517776369625,0.474541238222193,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0,0.245976877086227,0.514703430895577,0.768251997860379,1.1240175325762,1.00528972411631,1.48141512253647,0,1.03993478527958,0,0.34779121492523,0.70445216541493,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0.283550194484773,0.895585227028483,0.290633938513962,1.15014803749563,0,0,1.65862492432618,2.45003920808834,2.39860623510122,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.387815147273333,3.57656445851882,0,0.797814349754612,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0,0,0.473107245101804,0.468565659970853,0.902838299183157,2.27407504055985,0,0.664225598535437,1.10621501125022,0.695068915744663,1.17480694477644,1.37257369524342,0.206768026122887,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0,0.153461973288062,0.841980283299221,0.384417447767103,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.460404944679482,0.459257792658427,0.364182336013434,0.786746489756545,0.451199612907412,0.231046011313244,1.56869953835371,0,0,2.27466768141793,0.170093705276516,0.647747748306418,0,0.270946437543853,1.00337954770971,1.27438136522519,0,0.671624264166535,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0.676695028044854,0.308097234229289,0.614014698904518,0.137836572484531,0.214840489736547,0,0.170453254832202,0.267096106940212,0.165284915360978,0,0.765676274967505,0,0.464845549297286,0,0,0,0,0,0,0.715624433709956,0.372158369359667,0,0,0.767693373934002,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0.975267478179181,0,0,0.682499557039929,0.282810863907425,0,1.10273068709225,0.66343897524122,1.75380354101505,1.73632660280006,1.31178950409327,0.608731130888112,0.30982349809975,0,0,0.294747123039363,0,0.709522128141196,1.89996871767898,0.987884678879706,0.379473173765715,0.699869440489966,0.673554789078584,3.35151137767894,1.08890984861323,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,1.92495971052672,0.490080431962063,0,0.144269212976445,0.497992903438899,0,0.798317485731266,0,0.211673582723883,0.6492438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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0.436882744260345,0.263766978228454,0.247532705920093,1.32558950291166,1.34465029290355,1.20538905604795,0,0,1.23121058076788,1.63200552995402,0,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0,2.10844143144775,0.739508020333575,0,0,0.293600439334847,0,0,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,2.1686349143074,0.50133791063589,1.15877215168659,0,0.973269740605272,0.0945348171640679,0,0.087834785693126,1.17881167947941,1.45718115317017,1.11235332835329,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.759783069987479,0.264818361626438,1.14734648299525,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.908144565869588,0,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,0.469737994575059,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.309977343527296,0,0.494533858557114,0.910161361938026,1.43723628363248,0.673344455816265,0.125118519871964,0.554128230968366,0,0,0.600952235626387,0.340296549480063,0.717558542755448,2.98980344345994,0.847727604638247,0.600182192168805,1.13357782162283,1.28820270022815,1.30281799432113,0.168776332241266,0.487185025805993,0.504867548488229,1.19664868234989,2.10139873864455,1.77504796258307,0.201504196455281,0.508681776931463,0.57978255948989,0.545492241181669,0.573609190778008,0.487894824518382,0.397589304964456,0.69716365721711,0.10366105501537,0.252320850875628,0,0,1.28648187638577,4.14404764057442,0.464367928031979,0.721879481669586,0.828147600278907,0.842923450390509,0.482022059766964,0.661763836394364,0.871517776369625,0.474541238222193,0.539325232640658,0.98110732562673,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0,0.245976877086227,0.514703430895577,0.768251997860379,1.1240175325762,1.00528972411631,1.48141512253647,0,1.03993478527958,0,0.34779121492523,0.70445216541493,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0.283550194484773,0.895585227028483,0.290633938513962,1.15014803749563,0,0,1.65862492432618,2.45003920808834,2.39860623510122,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.387815147273333,3.57656445851882,0,0.797814349754612,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0,0,0.473107245101804,0.468565659970853,0.902838299183157,2.27407504055985,0,0.664225598535437,1.10621501125022,0.695068915744663,1.17480694477644,1.37257369524342,0.206768026122887,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0,0.153461973288062,0.841980283299221,0.384417447767103,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.460404944679482,0.459257792658427,0.364182336013434,0.786746489756545,0.451199612907412,0.231046011313244,1.56869953835371,0,0,2.27466768141793,0.170093705276516,0.647747748306418,0,0.270946437543853,1.00337954770971,1.27438136522519,0,0.671624264166535,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0.676695028044854,0.308097234229289,0.614014698904518,0.137836572484531,0.214840489736547,0,0.170453254832202,0.267096106940212,0.165284915360978,0,0.765676274967505,0,0.464845549297286,0,0,0,0,0,0,0.715624433709956,0.372158369359667,0,0,0.767693373934002,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0.975267478179181,0,0,0.682499557039929,0.282810863907425,0,1.10273068709225,0.66343897524122,1.75380354101505,1.73632660280006,1.31178950409327,0.608731130888112,0.30982349809975,0,0,0.294747123039363,0,0.709522128141196,1.89996871767898,0.987884678879706,0.379473173765715,0.699869440489966,0.673554789078584,3.35151137767894,1.08890984861323,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,1.92495971052672,0.490080431962063,0,0.144269212976445,0.497992903438899,0,0.798317485731266,0,0.211673582723883,0.6492438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| ||
|short_description=p2@SLC48A1 | |||
}} | }} |
Latest revision as of 13:06, 18 September 2015
Short description: | p2@SLC48A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC48A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549243_5end |
EntrezGene: | SLC48A1 |
HGNC: | 26035 |
UniProt: | F8W1R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.73e-08 | 6 |
stromal cell of endometrium | 3.73e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.14e-11 | 56 |
neural rod | 1.14e-11 | 56 |
future spinal cord | 1.14e-11 | 56 |
neural keel | 1.14e-11 | 56 |
regional part of nervous system | 1.26e-10 | 53 |
regional part of brain | 1.26e-10 | 53 |
neurectoderm | 1.68e-09 | 86 |
neural plate | 4.64e-09 | 82 |
presumptive neural plate | 4.64e-09 | 82 |
embryonic uterus | 5.16e-09 | 22 |
regional part of forebrain | 7.00e-09 | 41 |
forebrain | 7.00e-09 | 41 |
anterior neural tube | 7.00e-09 | 41 |
future forebrain | 7.00e-09 | 41 |
ecto-epithelium | 1.23e-08 | 104 |
brain | 1.28e-08 | 68 |
future brain | 1.28e-08 | 68 |
adult organism | 3.17e-08 | 114 |
uterus | 3.28e-08 | 21 |
brain grey matter | 4.77e-08 | 34 |
gray matter | 4.77e-08 | 34 |
internal female genitalia | 1.13e-07 | 22 |
internal genitalia | 1.56e-07 | 25 |
central nervous system | 2.45e-07 | 81 |
telencephalon | 3.10e-07 | 34 |
nervous system | 6.95e-07 | 89 |
regional part of telencephalon | 7.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.73e-08 | 6 |