FFCP PHASE1:Hg19::chr19:4472187..4472206,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4472187..4472206,+ to FFCP PHASE1:Hg19::chr19:4472187..4472206,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84717 | |EntrezGene=84717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4V5,E9PGW4 | |UniProt=Q7Z4V5,E9PGW4 | ||
|association_with_transcript=-48bp_to_ENST00000301284,ENST00000398364,NM_001001520,NM_032631,uc002mao.2,uc002map.2_5end | |||
|cluster_id=chr19:4472187..4472206,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_HDGFRP2_5end | |||
|id=chr19:4472187..4472206,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.30e-11;7!CL:1000612;3.30e-11;7!CL:0000650;2.72e-10;2!CL:1000500;2.72e-10;2!CL:1000618;2.72e-10;2!CL:1001318;2.72e-10;2!CL:0002173;2.72e-10;2!CL:0002592;2.79e-07;3!CL:0002681;6.54e-07;12!CL:0002584;6.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.48e-11,7;CL:1000612,3.48e-11,7;CL:0000650,3.58e-10,2;CL:1000500,3.58e-10,2;CL:1000618,3.58e-10,2;CL:1001318,3.58e-10,2;CL:0002173,3.58e-10,2;CL:0002592,2.32e-07,3;CL:0002681,6.74e-07,12;CL:0002584,6.74e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.56e-19;1!UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.95e-08!32;UBERON:0001893!1.01e-07!34;UBERON:0000955!1.25e-07!69;UBERON:0006238!1.25e-07!69;UBERON:0001049!1.44e-07!57;UBERON:0005068!1.44e-07!57;UBERON:0006241!1.44e-07!57;UBERON:0007135!1.44e-07!57;UBERON:0000956!1.88e-07!25;UBERON:0000203!1.88e-07!25;UBERON:0002020!1.98e-07!34;UBERON:0003528!1.98e-07!34;UBERON:0001950!2.28e-07!20;UBERON:0002791!4.04e-07!33;UBERON:0002616!5.53e-07!59;UBERON:0000073!5.67e-07!94;UBERON:0001016!5.67e-07!94;UBERON:0002346!8.53e-07!90;UBERON:0002780!9.96e-07!41;UBERON:0001890!9.96e-07!41;UBERON:0006240!9.96e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.30e-11;7!UBERON:0001229;3.30e-11;7!UBERON:0003567;2.72e-10;2!UBERON:0003838;2.72e-10;2!UBERON:0003586;2.72e-10;2!UBERON:0005169;2.72e-10;2!UBERON:0002321;2.72e-10;2!UBERON:0005215;2.72e-10;2!UBERON:0002303;2.72e-10;2!UBERON:0002319;2.72e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0003135;1.20e-07;11!UBERON:0003498;2.79e-07;3!UBERON:0005985;2.79e-07;3!UBERON:0001621;2.79e-07;3!UBERON:0001225;6.54e-07;12!UBERON:0008987;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.48e-11,7;UBERON:0000074,3.48e-11,7;UBERON:0001229,3.48e-11,7;UBERON:0001230,3.48e-11,7;UBERON:0003220,3.48e-11,7;UBERON:0005749,3.48e-11,7;UBERON:0004199,3.48e-11,7;UBERON:0004209,3.48e-11,7;UBERON:0004198,3.48e-11,7;UBERON:0000473,3.52e-10,8;UBERON:0003567,3.58e-10,2;UBERON:0003838,3.58e-10,2;UBERON:0003586,3.58e-10,2;UBERON:0005169,3.58e-10,2;UBERON:0002321,3.58e-10,2;UBERON:0005215,3.58e-10,2;UBERON:0002303,3.58e-10,2;UBERON:0002319,3.58e-10,2;UBERON:0005103,6.63e-10,8;UBERON:0000083,6.63e-10,8;UBERON:0009201,6.63e-10,8;UBERON:0006553,6.63e-10,8;UBERON:0003074,6.63e-10,8;UBERON:0003060,6.63e-10,8;UBERON:0000080,6.61e-09,9;UBERON:0002120,6.61e-09,9;UBERON:0004875,6.61e-09,9;UBERON:0005721,6.61e-09,9;UBERON:0005754,6.61e-09,9;UBERON:0007297,6.61e-09,9;UBERON:0003135,1.20e-07,11;UBERON:0004876,1.90e-07,11;UBERON:0001621,2.32e-07,3;UBERON:0001225,6.74e-07,12;UBERON:0008987,6.74e-07,12;UBERON:0003887,6.74e-07,12 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0.739508020333575,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.175669571386252,5.6975897841505,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0,0.506328996723799,0,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0,0.157702415033935,0,0,0,0,1.32845119707087,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0.170453254832202,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0.286822704408103,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0,0,0,0,0,0.994147647766298,0.562677665642051,0.222617410045812,0,0.422250816255987,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0.442317039724898,0.295547618953547,0,0.21787692703798,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.359030577639089,0,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0.702793337176017,0,0.19566461893209,0,0,0,0.61214552326098,0.126373159256976,0.300646838828985,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.353024506766001,0.225980740780532,0,0.596143835108969,0.633107959558787,0.195551382734803,0,0,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0,0.543616824294456,0,0.305994652908965,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.303747783290123,0,0,0.367182116944987,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.221858103073705,0.248385611765534,0.276697269872462,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0.447764408660622,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0.465788870628778,0,0,0,0,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0.521988583930423,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0.76872455576384,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0.38368311391095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| ||
|short_description=p4@HDGFRP2 | |||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p4@HDGFRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HDGFRP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -48bp_to_ENST00000301284, ENST00000398364, NM_001001520, NM_032631, uc002mao.2, uc002map.2_5end |
EntrezGene: | HDGFRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.48e-11 | 7 |
kidney corpuscule cell | 3.48e-11 | 7 |
mesangial cell | 3.58e-10 | 2 |
kidney interstitial cell | 3.58e-10 | 2 |
juxtaglomerular complex cell | 3.58e-10 | 2 |
renal interstitial pericyte | 3.58e-10 | 2 |
extraglomerular mesangial cell | 3.58e-10 | 2 |
smooth muscle cell of the coronary artery | 2.32e-07 | 3 |
kidney cortical cell | 6.74e-07 | 12 |
renal cortical epithelial cell | 6.74e-07 | 12 |