FFCP PHASE1:Hg19::chr19:45254529..45254561,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45254529..45254561,+
|short_description=p10@BCL3
|description=CAGE_peak_10_at_BCL3_5end
|association_with_transcript=-16bp_to_ENST00000444487_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=602 | |EntrezGene=602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |HGNC=998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000444487_5end | |||
|cluster_id=chr19:45254529..45254561,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_10_at_BCL3_5end | |||
|id=chr19:45254529..45254561,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.20e-20!42;CL:0000860!8.03e-19!45;CL:0000766!1.29e-17!76;CL:0000557!2.30e-13!71;CL:0000839!6.50e-13!70;CL:0002194!4.38e-12!63;CL:0000576!4.38e-12!63;CL:0000040!4.38e-12!63;CL:0000559!4.38e-12!63;CL:0002009!6.39e-12!65;CL:0000738!1.76e-10!140;CL:0000763!1.96e-07!112;CL:0000049!1.96e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-37;33!CL:0002057;3.70e-37;33!CL:0000473;2.67e-29;39!CL:0000234;2.67e-29;39!CL:0000576;1.24e-18;48!CL:0000766;1.08e-17;69!CL:0000081;5.53e-09;11!CL:0000094;2.40e-08;8!CL:0000763;2.42e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.33e-35,42;CL:0002057,2.33e-35,42;CL:0000473,6.76e-35,48;CL:0000234,6.76e-35,48;CL:0000766,7.38e-35,72;CL:0000557,6.79e-28,67;CL:0000839,6.03e-27,66;CL:0002009,2.50e-25,61;CL:0002194,4.97e-25,59;CL:0000576,4.97e-25,59;CL:0000040,4.97e-25,59;CL:0000559,4.97e-25,59;CL:0000763,5.10e-23,108;CL:0000049,5.10e-23,108;CL:0000738,7.58e-22,136;CL:0000988,1.04e-15,177;CL:0000037,1.20e-14,168;CL:0002032,4.94e-14,161;CL:0000837,4.94e-14,161;CL:0002031,5.34e-14,120;CL:0002087,7.43e-12,115;CL:0000081,4.43e-09,11;CL:0002320,1.45e-08,361;CL:0000094,2.84e-08,8;CL:0000134,5.08e-08,354;CL:0000048,2.67e-07,427;CL:0000034,5.51e-07,441;CL:0000723,7.37e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-26;42!CL:0000049;7.06e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.39e-13!112;UBERON:0002390!2.13e-13!102;UBERON:0003061!2.13e-13!102;UBERON:0002371!2.55e-11!80;UBERON:0002204!2.58e-11!167;UBERON:0004765!1.58e-10!101;UBERON:0001434!1.58e-10!101;UBERON:0001474!7.60e-10!86;UBERON:0000926!2.67e-09!448;UBERON:0004120!2.67e-09!448;UBERON:0006603!2.67e-09!448;UBERON:0002405!5.11e-09!115;UBERON:0003081!9.35e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-28,98;UBERON:0003061,1.79e-28,98;UBERON:0002193,1.80e-26,108;UBERON:0002371,1.84e-25,76;UBERON:0001474,1.75e-23,82;UBERON:0004765,3.30e-23,90;UBERON:0001434,2.00e-21,100;UBERON:0002405,3.68e-21,93;UBERON:0002204,6.45e-15,167;UBERON:0003081,3.81e-14,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,1.04e-07,371 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0,0,1.60896258848061,0.662794751455832,0.672325146451775,1.20538905604795,2.19093027116212,0.487932798790507,0.984968464614303,1.02000345622126,0.313454721478088,0,0.958120975510189,0.125542639594803,0.61130724598361,0.246301768349837,0.314843125254717,1.57345710739562,0.383829398097213,1.08371286321253,0,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,5.01361118675354,1.08505435357926,0.447830948479849,0,0.257575567634187,5.08893835728477,5.66813915533214,7.5201058968223,13.7133131774354,7.81218987241469,4.02618282163635,17.261543539329,11.2710710872804,8.74984250587765,6.55016793399575,6.45484683583826,8.12558919566051,16.9418105588344,14.191119803008,8.7642158933583,11.0190201253525,11.2325159476633,7.67204550958849,17.8119702100827,14.5608470063791,13.6391920170462,12.7692064996577,6.24123747160254,7.4738669879469,11.3061899365534,7.82224377630302,7.8187984093842,7.26479403160043,5.89244217580104,5.06339819905415,0.845021145247767,1.70083439972035,0.209658645508376,1.79725809834392,2.10247649978109,0.64290234678832,0.285012743741249,0.59675003159727,0,0,0,0.889509253863555,0,0,0,0,0,0,1.17447437874188,1.14681968437569,1.32171328579026,1.68152568894461,0.263384084775077,0.393419540227666,0.393010762749165,0.205601498999509,0.668745981562712,0,0,1.94826728407911,1.55974639639243,0.589211814949674,0.221533894583621,1.89562704635511,0.384273959177026,0.650296737799391,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0,1.04535523804977,0.226618685395132,1.14966148080576,0,0.506039384039006,0,0,0,0.451725357233318,0.127986611154418,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,0.670700859703636,0.12786256184353,0,1.50401373190767,1.59331170856906,0.795285947051099,0.973269740605272,0.567208902984407,0.221729397462564,0.263504357079378,0.392937226493138,0,0.370784442784429,0,0,0.132957960518865,0.715471872916026,1.14398982156026,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,1.89853131913626,0,6.58902087180316,19.3890132074163,0.436094052142534,0.496971951695318,1.64619665163954,0.264818361626438,1.72101972449288,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,1.34710672069688,0.980771418680752,0.908144565869588,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0.421352420106746,0,0.368502951935304,0.413303124703062,1.18800285728205,1.7308685049499,0,4.31170885089743,0.336672227908132,0.500474079487857,0.277064115484183,0.877955241761676,0.612975591598039,1.80285670687916,0.113432183160021,0.179389635688862,0,0.423863802319124,0,0.618315175430633,0,0.18611685633159,0,0.584622030967192,0,0.460249493211497,0.484938170456436,0,0.302256294682921,0.339121184620975,0,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,3.12899064659632,0.643240938192885,1.38134921352481,1.39310378409594,0,0.828147600278907,0.337169380156203,0.241011029883482,0.55146986366197,0.871517776369625,0.474541238222193,0.269662616320329,0.196221465125346,0,0,4.20725321410337,0.8231480226628,0,0,0,0.590789906681404,0,0.983907508344908,0,0.219500570817251,0,0.100528972411631,0.462942225792648,1.3032332212413,0,0,0.231860809950154,0,0.577465791044295,0.925971025153221,1.52203321787679,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.567100388969546,0,0,0,1.47798971368783,0.880484340132261,7.87846839054934,5.18831832301061,2.65109110195398,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0.301439377059586,2.61460037580088,0.599837947092342,1.2162378064119,2.51128545716063,2.10833939483032,0,2.29723871668228,0,0,0.205476322550383,0.358121926479791,0.336255431980582,0.591092280605782,2.15627574859517,0.641715181398742,1.01637849688985,1.30139853857622,0.773288812777695,0,0,20.2231896465739,47.865833472644,12.8468809165171,1.10422342547226,1.50051156317903,0.271265023699736,0.831883446123229,0.713715955188647,0,0.35142424497814,0.300946099727719,4.5481500811197,0,0.664225598535437,0.184369168541703,0.695068915744663,0.587403472388222,0,0,3.23571301227925,0.960548020230999,0,0,0,0.248107807818777,0,0.280660094433074,0.640695746278505,0.511707249066704,0.160853921143607,2.96836132889982,1.23367755042124,0.355123450626254,0.328508624055237,1.03850885836724,1.04589340613963,0.604297247958111,2.40607764363942,1.28913384510255,0.68888668898764,0.364182336013434,1.70461739447251,0,0.308061348417659,1.56869953835371,1.46139224653261,0.422206515571503,0,0.510281115829547,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853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| ||
|short_description=p10@BCL3 | |||
}} | }} |
Latest revision as of 14:08, 18 September 2015
Short description: | p10@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BCL3_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -16bp_to_ENST00000444487_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.33e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-35 | 42 |
defensive cell | 6.76e-35 | 48 |
phagocyte | 6.76e-35 | 48 |
myeloid leukocyte | 7.38e-35 | 72 |
granulocyte monocyte progenitor cell | 6.79e-28 | 67 |
myeloid lineage restricted progenitor cell | 6.03e-27 | 66 |
macrophage dendritic cell progenitor | 2.50e-25 | 61 |
monopoietic cell | 4.97e-25 | 59 |
monocyte | 4.97e-25 | 59 |
monoblast | 4.97e-25 | 59 |
promonocyte | 4.97e-25 | 59 |
myeloid cell | 5.10e-23 | 108 |
common myeloid progenitor | 5.10e-23 | 108 |
leukocyte | 7.58e-22 | 136 |
hematopoietic cell | 1.04e-15 | 177 |
hematopoietic stem cell | 1.20e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.94e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.94e-14 | 161 |
hematopoietic lineage restricted progenitor cell | 5.34e-14 | 120 |
nongranular leukocyte | 7.43e-12 | 115 |
blood cell | 4.43e-09 | 11 |
connective tissue cell | 1.45e-08 | 361 |
granulocyte | 2.84e-08 | 8 |
mesenchymal cell | 5.08e-08 | 354 |
multi fate stem cell | 2.67e-07 | 427 |
stem cell | 5.51e-07 | 441 |
somatic stem cell | 7.37e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-28 | 98 |
blood island | 1.79e-28 | 98 |
hemolymphoid system | 1.80e-26 | 108 |
bone marrow | 1.84e-25 | 76 |
bone element | 1.75e-23 | 82 |
skeletal element | 3.30e-23 | 90 |
skeletal system | 2.00e-21 | 100 |
immune system | 3.68e-21 | 93 |
musculoskeletal system | 6.45e-15 | 167 |
lateral plate mesoderm | 3.81e-14 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 1.04e-07 | 371 |