FFCP PHASE1:Hg19::chr19:45451707..45451718,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:45451707..45451718,+ to FFCP PHASE1:Hg19::chr19:45451707..45451718,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344 | |EntrezGene=344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=609 | |HGNC=609 | ||
|TSSclassifier=strong | |||
|UniProt=P02655 | |UniProt=P02655 | ||
|association_with_transcript=-4bp_to_BC005348_5end | |||
|cluster_id=chr19:45451707..45451718,+ | |||
|description=CAGE_peak_6_at_APOC2_5end | |||
|id=chr19:45451707..45451718,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.49e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.24e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.25e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.28e-21;3!UBERON:0003057;2.28e-21;3!UBERON:0010122;6.67e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-37!57;UBERON:0005068!1.71e-37!57;UBERON:0006241!1.71e-37!57;UBERON:0007135!1.71e-37!57;UBERON:0007023!1.80e-34!115;UBERON:0002616!7.65e-31!59;UBERON:0001017!1.10e-29!82;UBERON:0002020!4.65e-29!34;UBERON:0003528!4.65e-29!34;UBERON:0000955!1.94e-28!69;UBERON:0006238!1.94e-28!69;UBERON:0002780!7.62e-28!41;UBERON:0001890!7.62e-28!41;UBERON:0006240!7.62e-28!41;UBERON:0005743!7.67e-28!86;UBERON:0002791!3.87e-27!33;UBERON:0003080!4.99e-27!42;UBERON:0003075!1.07e-26!86;UBERON:0007284!1.07e-26!86;UBERON:0001893!3.50e-26!34;UBERON:0002346!4.66e-25!90;UBERON:0000073!2.94e-24!94;UBERON:0001016!2.94e-24!94;UBERON:0001869!1.30e-22!32;UBERON:0002308!1.26e-21!9;UBERON:0000125!1.26e-21!9;UBERON:0003056!3.43e-18!61;UBERON:0009663!2.46e-17!7;UBERON:0002420!3.50e-17!9;UBERON:0007245!3.50e-17!9;UBERON:0010009!3.50e-17!9;UBERON:0010011!3.50e-17!9;UBERON:0000454!3.50e-17!9;UBERON:0002619!1.89e-15!22;UBERON:0000025!5.01e-15!194;UBERON:0002298!4.71e-14!8;UBERON:0000956!2.82e-13!25;UBERON:0000203!2.82e-13!25;UBERON:0000033!4.47e-13!123;UBERON:0000153!6.09e-13!129;UBERON:0007811!6.09e-13!129;UBERON:0001950!4.40e-12!20;UBERON:0003076!1.98e-11!15;UBERON:0003057!1.98e-11!15;UBERON:0004111!3.58e-11!241;UBERON:0000369!3.04e-10!4;UBERON:0002435!3.04e-10!4;UBERON:0000204!3.04e-10!4;UBERON:0010082!3.04e-10!4;UBERON:0004121!4.02e-10!169;UBERON:0000924!1.12e-09!173;UBERON:0006601!1.12e-09!173;UBERON:0001871!1.39e-09!7;UBERON:0000483!2.73e-09!309;UBERON:0000477!2.84e-09!286;UBERON:0000119!4.48e-09!312;UBERON:0004733!1.36e-08!12;UBERON:0002028!1.36e-08!12;UBERON:0007277!1.36e-08!12;UBERON:0005383!1.39e-08!3;UBERON:0005382!1.39e-08!3;UBERON:0006331!2.57e-08!3;UBERON:0000349!5.23e-08!5;UBERON:0001896!6.39e-08!3;UBERON:0005290!6.39e-08!3;UBERON:0010096!6.39e-08!3;UBERON:0004732!7.56e-08!13;UBERON:0000988!1.17e-07!3;UBERON:0002771!3.81e-07!3;UBERON:0000475!9.02e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;9.60e-35;7!UBERON:0001875;4.04e-31;2!UBERON:0006514;4.04e-31;2!UBERON:0002420;3.90e-27;9!UBERON:0000125;3.90e-27;9!UBERON:0007245;3.90e-27;9!UBERON:0002308;3.90e-27;9!UBERON:0010009;3.90e-27;9!UBERON:0010011;3.90e-27;9!UBERON:0000454;3.90e-27;9!UBERON:0002240;2.28e-21;3!UBERON:0005174;2.28e-21;3!UBERON:0001137;2.28e-21;3!UBERON:0002171;5.52e-17;1!UBERON:0006518;5.52e-17;1!UBERON:0008949;5.52e-17;1!UBERON:0000101;5.52e-17;1!UBERON:0002167;5.52e-17;1!UBERON:0002038;1.78e-16;1!UBERON:0009661;1.78e-16;1!UBERON:0002950;1.78e-16;1!UBERON:0001891;1.78e-16;1!UBERON:0001873;6.67e-09;2!UBERON:0002107;7.81e-08;19!UBERON:0006925;7.81e-08;19!UBERON:0002791;7.75e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.36e-34,7;UBERON:0001875,2.97e-31,2;UBERON:0006514,2.97e-31,2;UBERON:0002420,5.12e-27,9;UBERON:0000125,5.12e-27,9;UBERON:0007245,5.12e-27,9;UBERON:0002308,5.12e-27,9;UBERON:0010009,5.12e-27,9;UBERON:0010011,5.12e-27,9;UBERON:0000454,5.12e-27,9;UBERON:0002240,1.76e-21,3;UBERON:0005174,1.76e-21,3;UBERON:0001137,1.76e-21,3;UBERON:0002171,5.53e-17,1;UBERON:0006518,5.53e-17,1;UBERON:0008949,5.53e-17,1;UBERON:0000101,5.53e-17,1;UBERON:0002167,5.53e-17,1;UBERON:0002038,3.07e-16,1;UBERON:0009661,3.07e-16,1;UBERON:0002950,3.07e-16,1;UBERON:0001891,3.07e-16,1;UBERON:0009616,3.07e-16,1;UBERON:0010286,3.07e-16,1;UBERON:0001049,2.32e-09,56;UBERON:0005068,2.32e-09,56;UBERON:0006241,2.32e-09,56;UBERON:0007135,2.32e-09,56;UBERON:0001873,8.09e-09,2;UBERON:0010122,8.09e-09,2;UBERON:0007023,6.71e-08,114;UBERON:0002107,7.28e-08,19;UBERON:0006925,7.28e-08,19;UBERON:0008836,7.28e-08,19;UBERON:0002791,1.32e-07,32;UBERON:0003528,3.49e-07,34;UBERON:0002020,3.49e-07,34;UBERON:0001893,3.49e-07,34;UBERON:0000025,6.08e-07,192;UBERON:0008835,7.32e-07,22;UBERON:0003894,7.32e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,2.43247561282381,0,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0.588187602953219,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.46552233678082,2.65013777824443,0.646414781807753,0.66116300871345,0,0,0.747511887973863,0,5.38510771951354,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.313972371402056,0.785577949580009,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,2.37637120261669,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,2.43247561282381,0,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0.588187602953219,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.46552233678082,2.65013777824443,0.646414781807753,0.66116300871345,0,0,0.747511887973863,0,5.38510771951354,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.313972371402056,0.785577949580009,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,2.37637120261669,0,0,0,0,0,0,0,0,0,0,1.00337708206016,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@APOC2 | |||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p6@APOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_BC005348_5end |
EntrezGene: | APOC2 |
HGNC: | 609 |
UniProt: | P02655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.25e-11 | 6 |