FFCP PHASE1:Hg19::chr17:10633174..10633199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388335 | |EntrezGene=388335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33757 | |HGNC=33757 | ||
|TSSclassifier=strong | |||
|UniProt=Q6QAJ8 | |UniProt=Q6QAJ8 | ||
|association_with_transcript=446bp_to_ENST00000341871,ENST00000455996,NM_001004313,uc002gmx.2,uc002gmy.2_5end | |association_with_transcript=446bp_to_ENST00000341871,ENST00000455996,NM_001004313,uc002gmx.2,uc002gmy.2_5end | ||
|cluster_id=chr17:10633174..10633199,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_TMEM220_5end | |description=CAGE_peak_3_at_TMEM220_5end | ||
|id=chr17:10633174..10633199,- | |id=chr17:10633174..10633199,- | ||
|ontology_enrichment_celltype=CL:0000511;3.91e-19;1!CL:0002625;3.91e-19;1!CL:0002581;3.91e-19;1!CL:0000216;3.91e-19;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000511;3.91e-19;1!CL:0002625;3.91e-19;1!CL:0002581;3.91e-19;1!CL:0000216;3.91e-19;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.25e-19,1;CL:0002625,3.25e-19,1;CL:0000216,3.25e-19,1;CL:0002581,3.91e-19,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.91e-19;1!UBERON:0009117;2.57e-08;10!UBERON:0005564;2.57e-08;10!UBERON:0003056;2.97e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000473;4.35e-21;8!UBERON:0001136;3.91e-19;1!UBERON:0000941;3.91e-19;1!UBERON:0001343;3.91e-19;1!UBERON:0001785;3.91e-19;1!UBERON:0002464;3.91e-19;1!UBERON:0004904;3.91e-19;1!UBERON:0001021;3.91e-19;1!UBERON:0004910;3.91e-19;1!UBERON:0004813;3.91e-19;1!UBERON:0003135;1.56e-15;11!UBERON:0003714;2.99e-10;2!UBERON:0005162;2.99e-10;2!UBERON:0000122;2.99e-10;2!UBERON:0004909;2.99e-10;2!UBERON:0005406;2.99e-10;2!UBERON:0000991;1.97e-08;21!UBERON:0003101;4.50e-08;22!UBERON:0000079;4.50e-08;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.35e-21;8!UBERON:0001136;3.91e-19;1!UBERON:0000941;3.91e-19;1!UBERON:0001343;3.91e-19;1!UBERON:0001785;3.91e-19;1!UBERON:0002464;3.91e-19;1!UBERON:0004904;3.91e-19;1!UBERON:0001021;3.91e-19;1!UBERON:0004910;3.91e-19;1!UBERON:0004813;3.91e-19;1!UBERON:0003135;1.56e-15;11!UBERON:0003714;2.99e-10;2!UBERON:0005162;2.99e-10;2!UBERON:0000122;2.99e-10;2!UBERON:0004909;2.99e-10;2!UBERON:0005406;2.99e-10;2!UBERON:0000991;1.97e-08;21!UBERON:0003101;4.50e-08;22!UBERON:0000079;4.50e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.92e-21,8;UBERON:0001136,3.25e-19,1;UBERON:0001343,3.25e-19,1;UBERON:0004910,3.25e-19,1;UBERON:0005154,3.25e-19,1;UBERON:0005295,3.25e-19,1;UBERON:0004813,3.25e-19,1;UBERON:0005297,3.25e-19,1;UBERON:0005294,3.25e-19,1;UBERON:0010141,3.25e-19,1;UBERON:0005891,3.25e-19,1;UBERON:0000941,4.69e-19,1;UBERON:0001785,4.69e-19,1;UBERON:0002464,4.69e-19,1;UBERON:0004904,4.69e-19,1;UBERON:0001021,4.69e-19,1;UBERON:0003902,4.69e-19,1;UBERON:0005425,4.69e-19,1;UBERON:0003135,1.45e-15,11;UBERON:0004909,2.72e-10,2;UBERON:0005406,2.99e-10,2;UBERON:0003714,3.27e-10,2;UBERON:0005162,3.27e-10,2;UBERON:0000122,3.27e-10,2;UBERON:0000991,1.90e-08,21;UBERON:0009196,1.90e-08,21;UBERON:0009117,1.90e-08,21;UBERON:0005564,1.90e-08,21;UBERON:0004176,4.34e-08,22;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,5.04269440666194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.512556597022804,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,1.75862680413699,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.540219106755613,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,5.98651715924091,20.9012021521819,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,5.04269440666194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.512556597022804,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,1.75862680413699,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.540219106755613,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,5.98651715924091,20.9012021521819,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@TMEM220 | |short_description=p3@TMEM220 | ||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p3@TMEM220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM220_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 446bp_to_ENST00000341871, ENST00000455996, NM_001004313, uc002gmx.2, uc002gmy.2_5end |
EntrezGene: | TMEM220 |
HGNC: | 33757 |
UniProt: | Q6QAJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.25e-19 | 1 |
seminiferous tubule epithelial cell | 3.25e-19 | 1 |
Sertoli cell | 3.25e-19 | 1 |
perirenal preadipocyte | 3.91e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.92e-21 | 8 |
mesothelium | 3.25e-19 | 1 |
seminiferous tubule of testis | 3.25e-19 | 1 |
epithelium of male gonad | 3.25e-19 | 1 |
epithelial cord | 3.25e-19 | 1 |
sex cord | 3.25e-19 | 1 |
seminiferous tubule epithelium | 3.25e-19 | 1 |
testis sex cord | 3.25e-19 | 1 |
genital ridge | 3.25e-19 | 1 |
primitive sex cord of indifferent gonad | 3.25e-19 | 1 |
coelomic epithelium | 3.25e-19 | 1 |
cranial nerve II | 4.69e-19 | 1 |
cranial nerve | 4.69e-19 | 1 |
nerve trunk | 4.69e-19 | 1 |
nerve connecting eye with brain | 4.69e-19 | 1 |
nerve | 4.69e-19 | 1 |
retinal neural layer | 4.69e-19 | 1 |
presumptive neural retina | 4.69e-19 | 1 |
male reproductive organ | 1.45e-15 | 11 |
epithelium of gonad | 2.72e-10 | 2 |
perirenal fat | 2.99e-10 | 2 |
neural tissue | 3.27e-10 | 2 |
multi cell component structure | 3.27e-10 | 2 |
neuron projection bundle | 3.27e-10 | 2 |
gonad | 1.90e-08 | 21 |
indifferent external genitalia | 1.90e-08 | 21 |
indifferent gonad | 1.90e-08 | 21 |
gonad primordium | 1.90e-08 | 21 |
external genitalia | 4.34e-08 | 22 |
male organism | 4.34e-08 | 22 |
male reproductive system | 4.34e-08 | 22 |