FFCP PHASE1:Hg19::chr1:57045115..57045143,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:57045115..57045143,- to FFCP PHASE1:Hg19::chr1:57045115..57045143,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8613 | |EntrezGene=8613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |HGNC=9229 | ||
|TSSclassifier=strong | |||
|UniProt=O14495 | |UniProt=O14495 | ||
|association_with_transcript=97bp_to_ENST00000371250_5end | |||
|cluster_id=chr1:57045115..57045143,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_6_at_PPAP2B_5end | |||
|id=chr1:57045115..57045143,- | |||
|ontology_enrichment_celltype=CL:0000057!2.70e-10!75;CL:0000055!1.76e-07!180;CL:0000136!1.95e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.68e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.07e-09,76;CL:0000136,4.39e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.11e-18!115;UBERON:0000475!6.84e-14!365;UBERON:0000468!6.89e-10!659;UBERON:0001049!1.36e-09!57;UBERON:0005068!1.36e-09!57;UBERON:0006241!1.36e-09!57;UBERON:0007135!1.36e-09!57;UBERON:0002616!2.53e-09!59;UBERON:0002020!4.48e-09!34;UBERON:0003528!4.48e-09!34;UBERON:0001893!5.30e-09!34;UBERON:0002791!9.53e-09!33;UBERON:0000153!1.42e-08!129;UBERON:0007811!1.42e-08!129;UBERON:0000477!1.47e-08!286;UBERON:0003080!3.35e-08!42;UBERON:0001017!3.73e-08!82;UBERON:0001869!4.08e-08!32;UBERON:0000033!4.15e-08!123;UBERON:0002780!9.84e-08!41;UBERON:0001890!9.84e-08!41;UBERON:0006240!9.84e-08!41;UBERON:0000481!1.68e-07!347;UBERON:0000955!1.73e-07!69;UBERON:0006238!1.73e-07!69;UBERON:0005743!2.07e-07!86;UBERON:0003075!2.43e-07!86;UBERON:0007284!2.43e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.33e-08;34!UBERON:0002791;1.41e-07;32!UBERON:0003528;1.72e-07;34!UBERON:0002020;1.72e-07;34!UBERON:0001869;3.15e-07;32!UBERON:0004905;8.48e-07;8!UBERON:0000982;8.48e-07;8!UBERON:0004770;8.48e-07;8!UBERON:0002780;9.58e-07;41!UBERON:0001890;9.58e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.09e-20,114;UBERON:0001049,6.28e-10,56;UBERON:0005068,6.28e-10,56;UBERON:0006241,6.28e-10,56;UBERON:0007135,6.28e-10,56;UBERON:0003528,1.07e-09,34;UBERON:0002020,1.07e-09,34;UBERON:0001893,1.33e-09,34;UBERON:0002780,2.21e-09,41;UBERON:0001890,2.21e-09,41;UBERON:0003080,2.21e-09,41;UBERON:0006240,2.21e-09,41;UBERON:0010314,2.49e-09,132;UBERON:0000073,2.54e-09,53;UBERON:0002616,2.54e-09,53;UBERON:0003075,5.18e-09,82;UBERON:0007284,5.18e-09,82;UBERON:0002791,1.71e-08,32;UBERON:0001869,2.32e-08,32;UBERON:0002346,4.46e-08,86;UBERON:0003056,1.99e-07,61;UBERON:0001017,2.17e-07,81;UBERON:0000955,2.24e-07,68;UBERON:0006238,2.24e-07,68;UBERON:0000125,5.05e-07,9;UBERON:0002308,5.05e-07,9;UBERON:0010371,5.99e-07,104;UBERON:0004905,6.30e-07,8;UBERON:0000982,6.30e-07,8;UBERON:0004770,6.30e-07,8 | |||
|phase1_expression=3.08853244759946,2.78330681058278,2.39622486963151,1.0007329835313,3.12872766099101,1.74467704820074,2.53299878168311,0.631719873426831,6.26845507679612,0.491467873003018,0.697801167972428,0.218441372130172,1.05506791291381,2.10402800032079,2.98257638155124,0.672325146451775,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,0,1.71741592278634,1.50561867580173,0.502170558379211,0.840547463227464,0.738905305049512,1.10195093839151,0,0,0.309632246632152,0,0,0,0.387336002901508,0,0,0,0,0,0.895661896959697,1.29557466407592,0.77272670290256,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,1.63743690034707,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,5.42158728576849,7.01873074890245,7.82171202388448,0,0.486634870302636,1.13441780596881,0.665188192387692,0.702678285545008,1.5062593682237,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,1.72046919021225,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.976248230192678,1.10298924103761,0.81014194788176,0.0892997282840798,0.44905874525234,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0.993943903390637,0.506522046658319,0.529636723252875,1.14734648299525,0.709336764396714,0,0,0.24666754841716,1.24484414159907,0.538842688278752,0.653847612453835,1.05950199351452,1.15235184896,0.468642863667593,0.312160076830321,0,1.34503812496621,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.245668634623536,1.75653827998801,2.37600571456411,4.69807165629258,0.910161361938026,0,0.336672227908132,0.375355559615893,0.277064115484183,1.75591048352335,3.67785354958824,4.5071417671979,0.113432183160021,1.4351170855109,2.56268866582281,1.69545520927649,3.30100205692843,0.618315175430633,1.28820270022815,1.67505170698431,1.68776332241266,1.16924406193438,2.01947019395292,3.03764665519588,3.87950536365149,2.4850671476163,1.5112814734146,0.847802961552438,0,0,0.286804595389004,0.975789649036763,0.927708378250397,0.580969714347592,0.414644220061482,1.00928340350251,0.72995471815166,1.56449532329816,5.78916844373597,0,2.78620756819187,1.44375896333917,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0,1.4763109092493,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.651616610620649,2.07986957055916,0,1.15930404975077,0.234817388471643,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.2933531432838,0,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,1.0656887160644,0,5.96883765930587,0.823240336780769,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.099972991182057,2.43247561282381,0,0,0.479249710983165,1.14861935834114,0,3.61953266668948,1.64381058040307,1.07436577943937,0,0,0,0,1.01637849688985,1.30139853857622,0,0.335032530668698,0,0,0,0,5.03035116048474,2.00068208423871,1.89885516589815,0.623912584592421,3.03329280955175,2.20783381047509,2.92853537481783,1.20378439891088,0,1.03473071292505,1.99267679560631,0.737476674166813,0.781952530212746,0.783204629850962,0.686286847621712,0,0,0,1.81876542867756,0,2.72151263996712,1.73675465473144,2.455391572609,3.36792113319688,1.40953064181271,2.04682899626681,0.804269605718038,1.48418066444991,0.308419387605311,1.77561725313127,1.14978018419333,1.03850885836724,1.16210378459959,0.604297247958111,0.200506470303285,0,0.68888668898764,0.546273504020151,0.917870904715969,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,2.26690225624989,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0.870036464629098,0.308097234229289,0.460511024178389,0.275673144969061,1.93356440762893,2.0302337147992,0.852266274161009,2.31483292681517,0,0,0,0,0,1.88887408098384,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0,1.48863347743867,0.949138274156178,0,1.02359116524534,2.56763392820352,1.90921948755562,0,1.07923474549989,0.54907405947211,0.235624804691373,0,1.58510321173008,0,0.48763373908959,1.70599442741899,2.11300293513511,0.682499557039929,0.989838023675989,1.13008116620243,1.10273068709225,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.196498082026242,0.35667105148125,0,17.3108260944085,14.4889752902357,0.379473173765715,1.04980416073495,0,0,0,1.60044461320525,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0.37428108081644,1.46508179271894,0,0,0.284136146806413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| ||
|short_description=p6@PPAP2B | |||
}} | }} |
Latest revision as of 16:12, 18 September 2015
Short description: | p6@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PPAP2B_5end |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | 97bp_to_ENST00000371250_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | O14495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.07e-09 | 76 |
fat cell | 4.39e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.09e-20 | 114 |
neural tube | 6.28e-10 | 56 |
neural rod | 6.28e-10 | 56 |
future spinal cord | 6.28e-10 | 56 |
neural keel | 6.28e-10 | 56 |
brain grey matter | 1.07e-09 | 34 |
gray matter | 1.07e-09 | 34 |
telencephalon | 1.33e-09 | 34 |
regional part of forebrain | 2.21e-09 | 41 |
forebrain | 2.21e-09 | 41 |
anterior neural tube | 2.21e-09 | 41 |
future forebrain | 2.21e-09 | 41 |
structure with developmental contribution from neural crest | 2.49e-09 | 132 |
regional part of nervous system | 2.54e-09 | 53 |
regional part of brain | 2.54e-09 | 53 |
neural plate | 5.18e-09 | 82 |
presumptive neural plate | 5.18e-09 | 82 |
regional part of telencephalon | 1.71e-08 | 32 |
cerebral hemisphere | 2.32e-08 | 32 |
neurectoderm | 4.46e-08 | 86 |
pre-chordal neural plate | 1.99e-07 | 61 |
central nervous system | 2.17e-07 | 81 |
brain | 2.24e-07 | 68 |
future brain | 2.24e-07 | 68 |
neural nucleus | 5.05e-07 | 9 |
nucleus of brain | 5.05e-07 | 9 |
ecto-epithelium | 5.99e-07 | 104 |
articulation | 6.30e-07 | 8 |
skeletal joint | 6.30e-07 | 8 |
articular system | 6.30e-07 | 8 |