FFCP PHASE1:Hg19::chr8:61880221..61880237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100130298 | |EntrezGene=100130298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_NR_034003_5end | |association_with_transcript=69bp_to_NR_034003_5end | ||
|cluster_id=chr8:61880221..61880237,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_LOC100130298_5end | |description=CAGE_peak_2_at_LOC100130298_5end | ||
|id=chr8:61880221..61880237,- | |id=chr8:61880221..61880237,- | ||
|ontology_enrichment_celltype=CL:0002274!9.53e-11!5;CL:0000457!9.53e-11!5;CL:0002191!9.53e-11!5;CL:0000097!9.53e-11!5;CL:0000831!9.53e-11!5;CL:0002028!9.53e-11!5 | |ontology_enrichment_celltype=CL:0002274!9.53e-11!5;CL:0000457!9.53e-11!5;CL:0002191!9.53e-11!5;CL:0000097!9.53e-11!5;CL:0000831!9.53e-11!5;CL:0002028!9.53e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.21e-40;1!CL:0000557;2.21e-40;1!CL:0000235;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.06e-33!57;UBERON:0005068!8.06e-33!57;UBERON:0006241!8.06e-33!57;UBERON:0007135!8.06e-33!57;UBERON:0002616!7.65e-29!59;UBERON:0000955!2.16e-25!69;UBERON:0006238!2.16e-25!69;UBERON:0005743!9.45e-25!86;UBERON:0001017!2.28e-24!82;UBERON:0000073!1.53e-23!94;UBERON:0001016!1.53e-23!94;UBERON:0007023!3.99e-23!115;UBERON:0003075!2.74e-21!86;UBERON:0007284!2.74e-21!86;UBERON:0002780!4.22e-21!41;UBERON:0001890!4.22e-21!41;UBERON:0006240!4.22e-21!41;UBERON:0003080!1.67e-20!42;UBERON:0001893!2.82e-20!34;UBERON:0002346!4.79e-20!90;UBERON:0001869!6.42e-19!32;UBERON:0002791!2.22e-18!33;UBERON:0002020!1.26e-17!34;UBERON:0003528!1.26e-17!34;UBERON:0002619!2.55e-15!22;UBERON:0003056!1.94e-14!61;UBERON:0000153!3.87e-14!129;UBERON:0007811!3.87e-14!129;UBERON:0003076!5.50e-14!15;UBERON:0003057!5.50e-14!15;UBERON:0000033!6.75e-14!123;UBERON:0004733!8.77e-14!12;UBERON:0002028!8.77e-14!12;UBERON:0007277!8.77e-14!12;UBERON:0000956!2.80e-13!25;UBERON:0000203!2.80e-13!25;UBERON:0004732!1.23e-12!13;UBERON:0004121!6.18e-12!169;UBERON:0000924!1.72e-11!173;UBERON:0006601!1.72e-11!173;UBERON:0000349!3.07e-11!5;UBERON:0001950!3.89e-11!20;UBERON:0002680!7.59e-10!9;UBERON:0001895!7.59e-10!9;UBERON:0010092!7.59e-10!9;UBERON:0000200!4.01e-09!6;UBERON:0001954!4.09e-08!2;UBERON:0003022!4.09e-08!2;UBERON:0002421!4.09e-08!2;UBERON:0002600!4.09e-08!2;UBERON:0000025!4.34e-08!194;UBERON:0000369!7.96e-08!4;UBERON:0002435!7.96e-08!4;UBERON:0000204!7.96e-08!4;UBERON:0010082!7.96e-08!4;UBERON:0004111!4.56e-07!241;UBERON:0002298!4.57e-07!8;UBERON:0001871!5.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.96e-60;6!UBERON:0002680;3.32e-40;9!UBERON:0001895;3.32e-40;9!UBERON:0004733;2.00e-30;12!UBERON:0002028;2.00e-30;12!UBERON:0004732;3.65e-28;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0002680,3.80e-40,9;UBERON:0001895,3.80e-40,9;UBERON:0010092,3.80e-40,9;UBERON:0004733,2.22e-30,12;UBERON:0002028,2.22e-30,12;UBERON:0007277,2.22e-30,12;UBERON:0004732,4.00e-28,13;UBERON:0003076,1.65e-24,15;UBERON:0003057,1.65e-24,15;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56 | |||
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| ||
|short_description=p2@LOC100130298 | |short_description=p2@LOC100130298 | ||
}} | }} |
Latest revision as of 17:06, 18 September 2015
Short description: | p2@LOC100130298 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100130298_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 69bp_to_NR_034003_5end |
EntrezGene: | LOC100130298 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |