FFCP PHASE1:Hg19::chrX:100617761..100617773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=695 | |EntrezGene=695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1133 | |HGNC=1133 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000464006_5end | |association_with_transcript=29bp_to_ENST00000464006_5end | ||
|cluster_id=chrX:100617761..100617773,- | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_3_at_BTK_5end | |description=CAGE_peak_3_at_BTK_5end | ||
|id=chrX:100617761..100617773,- | |id=chrX:100617761..100617773,- | ||
|ontology_enrichment_celltype=CL:0000097;1.35e-30;5!CL:0000235;1.47e-25;6!CL:0000163;2.47e-17;9!CL:0000763;1.59e-08;100!CL:0000766;3.39e-08;69!CL:0002619;9.91e-07;3 | |ontology_enrichment_celltype=CL:0002274!1.60e-27!5;CL:0000457!1.60e-27!5;CL:0002191!1.60e-27!5;CL:0000097!1.60e-27!5;CL:0000831!1.60e-27!5;CL:0002028!1.60e-27!5;CL:0000763!1.54e-18!112;CL:0000049!1.54e-18!112;CL:0002619!3.98e-17!3;CL:0000163!3.35e-15!9;CL:0002032!4.56e-11!165;CL:0000837!4.56e-11!165;CL:0000037!2.00e-10!172;CL:0000566!2.00e-10!172;CL:0000839!2.62e-10!70;CL:0000557!3.96e-10!71;CL:0000988!1.35e-09!182;CL:0000766!2.67e-09!76;CL:0000235!4.81e-09!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;1.35e-30;5!CL:0000235;1.47e-25;6!CL:0000163;2.47e-17;9!CL:0000763;1.59e-08;100!CL:0000766;3.39e-08;69!CL:0002619;9.91e-07;3 | ||
|ontology_enrichment_disease=DOID:9119;5.26e-18;1!DOID:8692;7.55e-13;31!DOID:1240;9.52e-08;39!DOID:2531;5.02e-07;51!DOID:0060083;5.02e-07;51 | |ontology_enrichment_celltype_v019_2=CL:0000097,1.56e-30,5;CL:0002028,1.56e-30,5;CL:0000235,1.67e-25,6;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0000163,2.68e-17,9;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000839,9.26e-12,66;CL:0000557,1.40e-11,67;CL:0000766,9.26e-11,72;CL:0002619,9.12e-07,3 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0000049;1.43e-08;108 | ||
|ontology_enrichment_disease=DOID:8692!8.54e-13!31;DOID:1240!7.51e-10!39;DOID:2531!3.57e-07!51;DOID:0060083!3.57e-07!51;DOID:9119!4.85e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:9119;5.26e-18;1!DOID:8692;7.55e-13;31!DOID:1240;9.52e-08;39!DOID:2531;5.02e-07;51!DOID:0060083;5.02e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,4.44e-18,1;DOID:8692,2.30e-13,31;DOID:1240,1.24e-10,39;DOID:2531,3.90e-08,51;DOID:0060083,3.90e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-08!80;UBERON:0001474!6.25e-08!86;UBERON:0002193!1.27e-07!112;UBERON:0002390!1.97e-07!102;UBERON:0003061!1.97e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.53e-10,76;UBERON:0001474,2.06e-09,82;UBERON:0004765,1.52e-08,90;UBERON:0002405,2.94e-08,93;UBERON:0002390,8.12e-08,98;UBERON:0003061,8.12e-08,98;UBERON:0001434,1.19e-07,100;UBERON:0002193,4.69e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,9.36060152002293,5.37095447480679,0.414656231081544,0.720599767084807,1.13618190083742,0.507983154337352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,3.2454681417118,3.66379164797602,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29859058098149,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56740831967947,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,9.36060152002293,5.37095447480679,0.414656231081544,0.720599767084807,1.13618190083742,0.507983154337352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,3.2454681417118,3.66379164797602,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29859058098149,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@BTK | |short_description=p3@BTK | ||
}} | }} |
Latest revision as of 17:58, 18 September 2015
Short description: | p3@BTK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BTK_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 29bp_to_ENST00000464006_5end |
EntrezGene: | BTK |
HGNC: | 1133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.56e-30 | 5 |
basophil mast progenitor cell | 1.56e-30 | 5 |
macrophage | 1.67e-25 | 6 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
endocrine cell | 2.68e-17 | 9 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
myeloid lineage restricted progenitor cell | 9.26e-12 | 66 |
granulocyte monocyte progenitor cell | 1.40e-11 | 67 |
myeloid leukocyte | 9.26e-11 | 72 |
adult endothelial progenitor cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.53e-10 | 76 |
bone element | 2.06e-09 | 82 |
skeletal element | 1.52e-08 | 90 |
immune system | 2.94e-08 | 93 |
hematopoietic system | 8.12e-08 | 98 |
blood island | 8.12e-08 | 98 |
skeletal system | 1.19e-07 | 100 |
hemolymphoid system | 4.69e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.44e-18 | 1 |
myeloid leukemia | 2.30e-13 | 31 |
leukemia | 1.24e-10 | 39 |
hematologic cancer | 3.90e-08 | 51 |
immune system cancer | 3.90e-08 | 51 |