FFCP PHASE1:Hg19::chr11:62341318..62341402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1937 | |EntrezGene=1937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3213 | |HGNC=3213 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUP0 | |UniProt=B4DUP0 | ||
|association_with_transcript=0bp_to_ENST00000424909,ENST00000525340_5end | |association_with_transcript=0bp_to_ENST00000424909,ENST00000525340_5end | ||
|cluster_id=chr11:62341318..62341402,- | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_EEF1G_5end | |description=CAGE_peak_1_at_EEF1G_5end | ||
|id=chr11:62341318..62341402,- | |id=chr11:62341318..62341402,- | ||
|ontology_enrichment_celltype=CL:0000220!5.01e-28!246;CL:0002321!5.36e-28!248;CL:0000548!4.17e-23!679;CL:0000004!4.17e-23!679;CL:0000255!4.17e-23!679;CL:0000012!1.80e-22!682;CL:0000222!2.99e-22!119;CL:0000055!1.45e-20!180;CL:0000066!2.18e-18!254;CL:0000183!4.33e-18!59;CL:0000680!1.99e-16!57;CL:0000056!1.99e-16!57;CL:0000355!1.99e-16!57;CL:0000393!3.68e-16!60;CL:0000211!3.68e-16!60;CL:0000187!5.80e-16!54;CL:0000192!3.98e-14!42;CL:0000514!3.98e-14!42;CL:0000144!8.73e-14!625;CL:0000359!1.17e-11!32;CL:0002371!5.02e-11!591;CL:0000076!2.26e-10!62;CL:0000003!1.04e-09!722;CL:0000071!1.92e-07!18;CL:0002546!1.92e-07!18;CL:0000115!2.97e-07!35;CL:0000213!2.99e-07!57;CL:0000215!2.99e-07!57;CL:0002078!3.89e-07!44;CL:0002139!7.25e-07!24 | |ontology_enrichment_celltype=CL:0000220!5.01e-28!246;CL:0002321!5.36e-28!248;CL:0000548!4.17e-23!679;CL:0000004!4.17e-23!679;CL:0000255!4.17e-23!679;CL:0000012!1.80e-22!682;CL:0000222!2.99e-22!119;CL:0000055!1.45e-20!180;CL:0000066!2.18e-18!254;CL:0000183!4.33e-18!59;CL:0000680!1.99e-16!57;CL:0000056!1.99e-16!57;CL:0000355!1.99e-16!57;CL:0000393!3.68e-16!60;CL:0000211!3.68e-16!60;CL:0000187!5.80e-16!54;CL:0000192!3.98e-14!42;CL:0000514!3.98e-14!42;CL:0000144!8.73e-14!625;CL:0000359!1.17e-11!32;CL:0002371!5.02e-11!591;CL:0000076!2.26e-10!62;CL:0000003!1.04e-09!722;CL:0000071!1.92e-07!18;CL:0002546!1.92e-07!18;CL:0000115!2.97e-07!35;CL:0000213!2.99e-07!57;CL:0000215!2.99e-07!57;CL:0002078!3.89e-07!44;CL:0002139!7.25e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.36e-11;32!CL:0000192;4.39e-10;43!CL:0000187;1.86e-09;55!CL:0000393;2.38e-08;61!CL:0000211;2.38e-08;61!CL:0000071;1.96e-07;18!CL:0002139;7.15e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.23e-28,250;CL:0000222,1.48e-22,121;CL:0000066,1.78e-18,253;CL:0000680,4.13e-16,58;CL:0000056,4.13e-16,58;CL:0000355,4.13e-16,58;CL:0000393,7.30e-16,61;CL:0000211,7.30e-16,61;CL:0000187,1.22e-15,55;CL:0000192,9.10e-14,43;CL:0000514,9.10e-14,43;CL:0000359,1.17e-11,32;CL:0000076,1.06e-10,63;CL:0000115,1.01e-07,36;CL:0000213,1.18e-07,58;CL:0000215,1.18e-07,58;CL:0002078,1.43e-07,45;CL:0000071,1.92e-07,18;CL:0002546,1.92e-07,18;CL:0002139,7.25e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;4.39e-10;43!CL:0000355;2.94e-09;58!CL:0002546;1.96e-07;18!CL:0000222;7.69e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.07e-21!82;UBERON:0004290!6.91e-21!70;UBERON:0000914!7.15e-20!83;UBERON:0002329!7.15e-20!83;UBERON:0003077!7.15e-20!83;UBERON:0003059!7.15e-20!83;UBERON:0007282!7.15e-20!83;UBERON:0009618!7.15e-20!83;UBERON:0007285!7.15e-20!83;UBERON:0005256!5.66e-18!143;UBERON:0000490!7.28e-18!138;UBERON:0001134!7.86e-18!61;UBERON:0002036!7.86e-18!61;UBERON:0003082!7.86e-18!61;UBERON:0002049!4.46e-17!79;UBERON:0007798!4.46e-17!79;UBERON:0002100!6.75e-17!216;UBERON:0002385!3.23e-16!63;UBERON:0001015!3.23e-16!63;UBERON:0000383!3.23e-16!63;UBERON:0003104!5.55e-16!238;UBERON:0009142!5.55e-16!238;UBERON:0000055!1.17e-15!69;UBERON:0001637!2.36e-15!42;UBERON:0003509!2.36e-15!42;UBERON:0004572!2.36e-15!42;UBERON:0000119!4.11e-15!312;UBERON:0001981!4.25e-15!60;UBERON:0007500!4.25e-15!60;UBERON:0004537!4.25e-15!60;UBERON:0006965!4.25e-15!60;UBERON:0003914!4.64e-15!118;UBERON:0000483!2.43e-14!309;UBERON:0004872!1.38e-13!84;UBERON:0004573!2.62e-11!33;UBERON:0004571!2.62e-11!33;UBERON:0000475!4.13e-11!365;UBERON:0000481!1.17e-10!347;UBERON:0004535!1.51e-10!110;UBERON:0001009!5.46e-10!113;UBERON:0000487!6.65e-08!22;UBERON:0001986!1.92e-07!18;UBERON:0004638!1.92e-07!18;UBERON:0004852!1.92e-07!18;UBERON:0006914!5.66e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.49e-11;42!UBERON:0003509;3.49e-11;42!UBERON:0004572;3.49e-11;42!UBERON:0007500;7.68e-11;56!UBERON:0001981;7.68e-11;56!UBERON:0004537;7.68e-11;56!UBERON:0003914;1.00e-10;74!UBERON:0004573;3.21e-10;33!UBERON:0004571;3.21e-10;33!UBERON:0000055;6.58e-09;65!UBERON:0002049;3.49e-08;75!UBERON:0007798;3.49e-08;75!UBERON:0000025;5.17e-08;93!UBERON:0000487;6.85e-08;22!UBERON:0000490;7.24e-08;33!UBERON:0004638;1.96e-07;18!UBERON:0001986;1.96e-07;18!UBERON:0004852;1.96e-07;18!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31!UBERON:0006914;5.71e-07;25 | |||
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| ||
|short_description=p1@EEF1G | |short_description=p1@EEF1G | ||
}} | }} |
Latest revision as of 19:47, 18 September 2015
Short description: | p1@EEF1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EEF1G_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000424909, ENST00000525340_5end |
EntrezGene: | EEF1G |
HGNC: | 3213 |
UniProt: | B4DUP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.23e-28 | 250 |
mesodermal cell | 1.48e-22 | 121 |
epithelial cell | 1.78e-18 | 253 |
muscle precursor cell | 4.13e-16 | 58 |
myoblast | 4.13e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-16 | 58 |
electrically responsive cell | 7.30e-16 | 61 |
electrically active cell | 7.30e-16 | 61 |
muscle cell | 1.22e-15 | 55 |
smooth muscle cell | 9.10e-14 | 43 |
smooth muscle myoblast | 9.10e-14 | 43 |
vascular associated smooth muscle cell | 1.17e-11 | 32 |
squamous epithelial cell | 1.06e-10 | 63 |
endothelial cell | 1.01e-07 | 36 |
lining cell | 1.18e-07 | 58 |
barrier cell | 1.18e-07 | 58 |
meso-epithelial cell | 1.43e-07 | 45 |
blood vessel endothelial cell | 1.92e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-07 | 18 |
endothelial cell of vascular tree | 7.25e-07 | 24 |