FFCP PHASE1:Hg19::chr19:4670345..4670382,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:4670345..4670382,-
|short_description=p1@C19orf10
|description=CAGE_peak_1_at_C19orf10_5end
|association_with_transcript=32bp_to_ENST00000262947,NM_019107...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56005 | |EntrezGene=56005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16948 | |HGNC=16948 | ||
|TSSclassifier=strong | |||
|UniProt=Q969H8 | |UniProt=Q969H8 | ||
|association_with_transcript=32bp_to_ENST00000262947,NM_019107,uc002may.2_5end | |||
|cluster_id=chr19:4670345..4670382,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_C19orf10_5end | |||
|id=chr19:4670345..4670382,- | |||
|ontology_enrichment_celltype=CL:0000548!2.86e-35!679;CL:0000004!2.86e-35!679;CL:0000255!2.86e-35!679;CL:0000012!3.00e-35!682;CL:0000144!1.16e-34!625;CL:0002371!4.51e-34!591;CL:0000055!4.73e-31!180;CL:0000222!2.03e-25!119;CL:0000183!3.25e-20!59;CL:0000680!1.30e-19!57;CL:0000056!1.30e-19!57;CL:0000355!1.30e-19!57;CL:0000220!5.15e-19!246;CL:0000003!5.39e-19!722;CL:0000192!1.57e-18!42;CL:0000514!1.57e-18!42;CL:0000187!2.32e-18!54;CL:0002321!3.60e-18!248;CL:0000057!1.13e-15!75;CL:0000359!1.94e-15!32;CL:0000048!2.90e-15!430;CL:0000393!5.54e-15!60;CL:0000211!5.54e-15!60;CL:0000723!7.09e-15!436;CL:0000034!2.04e-13!444;CL:0000063!2.07e-12!578;CL:0002078!4.59e-08!44;CL:0000115!1.06e-07!35;CL:0000213!1.75e-07!57;CL:0000215!1.75e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-14;32!CL:0000192;2.44e-13;43!CL:0000187;4.64e-10;55!CL:0000134;1.25e-08;55!CL:0000393;1.16e-07;61!CL:0000211;1.16e-07;61!CL:0000723;2.46e-07;61!CL:0000048;3.34e-07;58!CL:0000115;5.06e-07;36!CL:0000057;6.72e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.44e-26,121;CL:0000680,1.31e-19,58;CL:0000056,1.31e-19,58;CL:0000355,1.31e-19,58;CL:0002321,1.28e-18,250;CL:0000192,1.78e-18,43;CL:0000514,1.78e-18,43;CL:0000187,2.32e-18,55;CL:0000057,3.51e-16,76;CL:0000359,1.94e-15,32;CL:0000393,5.07e-15,61;CL:0000211,5.07e-15,61;CL:0000048,6.18e-15,427;CL:0000723,1.50e-14,433;CL:0000034,4.18e-13,441;CL:0002078,2.01e-08,45;CL:0000115,4.52e-08,36;CL:0000213,8.28e-08,58;CL:0000215,8.28e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000514;2.44e-13;43!CL:0000355;2.09e-10;58!CL:0000222;5.17e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.37e-22!143;UBERON:0003914!9.28e-21!118;UBERON:0002049!2.47e-19!79;UBERON:0007798!2.47e-19!79;UBERON:0000490!3.92e-19!138;UBERON:0000055!4.20e-19!69;UBERON:0000486!6.49e-19!82;UBERON:0000914!9.35e-19!83;UBERON:0002329!9.35e-19!83;UBERON:0003077!9.35e-19!83;UBERON:0003059!9.35e-19!83;UBERON:0007282!9.35e-19!83;UBERON:0009618!9.35e-19!83;UBERON:0007285!9.35e-19!83;UBERON:0004290!2.45e-18!70;UBERON:0001637!3.96e-18!42;UBERON:0003509!3.96e-18!42;UBERON:0004572!3.96e-18!42;UBERON:0004872!1.07e-17!84;UBERON:0002100!1.34e-17!216;UBERON:0001981!2.78e-17!60;UBERON:0007500!2.78e-17!60;UBERON:0004537!2.78e-17!60;UBERON:0006965!2.78e-17!60;UBERON:0001134!3.05e-16!61;UBERON:0002036!3.05e-16!61;UBERON:0003082!3.05e-16!61;UBERON:0000926!1.54e-15!448;UBERON:0004120!1.54e-15!448;UBERON:0006603!1.54e-15!448;UBERON:0002385!5.48e-15!63;UBERON:0001015!5.48e-15!63;UBERON:0000383!5.48e-15!63;UBERON:0004573!2.76e-14!33;UBERON:0004571!2.76e-14!33;UBERON:0003104!6.28e-14!238;UBERON:0009142!6.28e-14!238;UBERON:0004535!3.76e-12!110;UBERON:0001009!2.45e-11!113;UBERON:0000947!1.57e-07!21;UBERON:0010191!1.57e-07!21;UBERON:0002204!5.92e-07!167;UBERON:0009569!7.88e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.22e-13;42!UBERON:0003509;3.22e-13;42!UBERON:0004572;3.22e-13;42!UBERON:0004573;4.94e-13;33!UBERON:0004571;4.94e-13;33!UBERON:0007500;1.04e-10;56!UBERON:0001981;1.04e-10;56!UBERON:0004537;1.04e-10;56!UBERON:0003914;1.05e-09;74!UBERON:0000055;1.16e-09;65!UBERON:0002049;1.93e-08;75!UBERON:0007798;1.93e-08;75!UBERON:0000947;1.58e-07;21!UBERON:0010191;1.58e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.99e-21,148;UBERON:0007503,3.11e-21,78;UBERON:0003914,1.11e-20,117;UBERON:0005256,5.66e-20,122;UBERON:0000486,5.76e-19,83;UBERON:0003104,6.27e-19,160;UBERON:0009142,6.27e-19,160;UBERON:0002049,8.45e-19,78;UBERON:0007798,8.45e-19,78;UBERON:0000055,1.48e-18,68;UBERON:0002329,2.25e-18,71;UBERON:0003059,2.25e-18,71;UBERON:0007282,2.25e-18,71;UBERON:0004290,2.25e-18,71;UBERON:0009618,2.25e-18,71;UBERON:0001637,3.96e-18,42;UBERON:0003509,3.96e-18,42;UBERON:0004572,3.96e-18,42;UBERON:0007524,6.25e-18,73;UBERON:0003077,1.84e-17,72;UBERON:0007285,1.84e-17,72;UBERON:0002100,2.78e-17,199;UBERON:0004872,3.48e-17,83;UBERON:0007500,9.73e-17,59;UBERON:0001981,9.73e-17,59;UBERON:0004537,9.73e-17,59;UBERON:0006965,9.73e-17,59;UBERON:0001134,2.83e-16,62;UBERON:0002036,2.83e-16,62;UBERON:0003082,2.83e-16,62;UBERON:0002385,4.95e-15,64;UBERON:0001015,4.95e-15,64;UBERON:0000383,4.95e-15,64;UBERON:0004573,2.76e-14,33;UBERON:0004571,2.76e-14,33;UBERON:0000926,6.91e-12,315;UBERON:0004120,6.91e-12,315;UBERON:0006603,6.91e-12,315;UBERON:0004535,9.63e-12,109;UBERON:0001009,6.04e-11,112;UBERON:0000947,1.57e-07,21;UBERON:0010191,1.57e-07,21;UBERON:0002204,6.31e-07,167;UBERON:0003102,8.30e-07,99 | |||
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| ||
|short_description=p1@C19orf10 | |||
}} | }} |
Latest revision as of 20:14, 18 September 2015
Short description: | p1@C19orf10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf10_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 32bp_to_ENST00000262947, NM_019107, uc002may.2_5end |
EntrezGene: | C19orf10 |
HGNC: | 16948 |
UniProt: | Q969H8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.44e-26 | 121 |
muscle precursor cell | 1.31e-19 | 58 |
myoblast | 1.31e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-19 | 58 |
embryonic cell | 1.28e-18 | 250 |
smooth muscle cell | 1.78e-18 | 43 |
smooth muscle myoblast | 1.78e-18 | 43 |
muscle cell | 2.32e-18 | 55 |
fibroblast | 3.51e-16 | 76 |
vascular associated smooth muscle cell | 1.94e-15 | 32 |
electrically responsive cell | 5.07e-15 | 61 |
electrically active cell | 5.07e-15 | 61 |
multi fate stem cell | 6.18e-15 | 427 |
somatic stem cell | 1.50e-14 | 433 |
stem cell | 4.18e-13 | 441 |
meso-epithelial cell | 2.01e-08 | 45 |
endothelial cell | 4.52e-08 | 36 |
lining cell | 8.28e-08 | 58 |
barrier cell | 8.28e-08 | 58 |