FFCP PHASE1:Hg19::chrX:102983417..102983428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441509 | |EntrezGene=441509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31715 | |HGNC=31715 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JXX5 | |UniProt=Q5JXX5 | ||
|association_with_transcript=123bp_to_ENST00000372617,ENST00000480725,NM_001024452,NM_001172285,uc010nou.2,uc011mse.1_5end | |association_with_transcript=123bp_to_ENST00000372617,ENST00000480725,NM_001024452,NM_001172285,uc010nou.2,uc011mse.1_5end | ||
|cluster_id=chrX:102983417..102983428,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_1_at_GLRA4_5end | |description=CAGE_peak_1_at_GLRA4_5end | ||
|id=chrX:102983417..102983428,- | |id=chrX:102983417..102983428,- | ||
|ontology_enrichment_celltype=CL:0002322!5.18e-14!5;CL:0000708!7.32e-07!3 | |ontology_enrichment_celltype=CL:0002322!5.18e-14!5;CL:0000708!7.32e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000632;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3!UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001781,1.03e-17,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0000010,1.21e-08,8 | |||
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| ||
|short_description=p1@GLRA4 | |short_description=p1@GLRA4 | ||
}} | }} |
Latest revision as of 20:21, 18 September 2015
Short description: | p1@GLRA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLRA4_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 123bp_to_ENST00000372617, ENST00000480725, NM_001024452, NM_001172285, uc010nou.2, uc011mse.1_5end |
EntrezGene: | GLRA4 |
HGNC: | 31715 |
UniProt: | Q5JXX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |